A citation-based method for searching scientific literature

Alessandro Bertero, Manuel Rosa-Garrido. J Mol Cell Cardiol 2021
Times Cited: 6







List of co-cited articles
18 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
Suhas S P Rao, Miriam H Huntley, Neva C Durand, Elena K Stamenova, Ivan D Bochkov, James T Robinson, Adrian L Sanborn, Ido Machol, Arina D Omer, Eric S Lander,[...]. Cell 2014
50

Understanding the 3D genome: Emerging impacts on human disease.
Anton Krumm, Zhijun Duan. Semin Cell Dev Biol 2019
28
33

Epigenetics and cardiovascular development.
Ching-Pin Chang, Benoit G Bruneau. Annu Rev Physiol 2012
146
33

Extensive Heterogeneity and Intrinsic Variation in Spatial Genome Organization.
Elizabeth H Finn, Gianluca Pegoraro, Hugo B Brandão, Anne-Laure Valton, Marlies E Oomen, Job Dekker, Leonid Mirny, Tom Misteli. Cell 2019
194
33

Super-resolution chromatin tracing reveals domains and cooperative interactions in single cells.
Bogdan Bintu, Leslie J Mateo, Jun-Han Su, Nicholas A Sinnott-Armstrong, Mirae Parker, Seon Kinrot, Kei Yamaya, Alistair N Boettiger, Xiaowei Zhuang. Science 2018
374
33

Methods for mapping 3D chromosome architecture.
Rieke Kempfer, Ana Pombo. Nat Rev Genet 2020
159
33

Mapping of long-range chromatin interactions by proximity ligation-assisted ChIP-seq.
Rongxin Fang, Miao Yu, Guoqiang Li, Sora Chee, Tristin Liu, Anthony D Schmitt, Bing Ren. Cell Res 2016
155
33

Dynamics of genome reorganization during human cardiogenesis reveal an RBM20-dependent splicing factory.
Alessandro Bertero, Paul A Fields, Vijay Ramani, Giancarlo Bonora, Galip G Yardimci, Hans Reinecke, Lil Pabon, William S Noble, Jay Shendure, Charles E Murry. Nat Commun 2019
48
33

Cardiomyocyte maturation: advances in knowledge and implications for regenerative medicine.
Elaheh Karbassi, Aidan Fenix, Silvia Marchiano, Naoto Muraoka, Kenta Nakamura, Xiulan Yang, Charles E Murry. Nat Rev Cardiol 2020
168
33

High-Resolution Mapping of Chromatin Conformation in Cardiac Myocytes Reveals Structural Remodeling of the Epigenome in Heart Failure.
Manuel Rosa-Garrido, Douglas J Chapski, Anthony D Schmitt, Todd H Kimball, Elaheh Karbassi, Emma Monte, Enrique Balderas, Matteo Pellegrini, Tsai-Ting Shih, Elizabeth Soehalim,[...]. Circulation 2017
81
33


Distinct epigenetic programs regulate cardiac myocyte development and disease in the human heart in vivo.
Ralf Gilsbach, Martin Schwaderer, Sebastian Preissl, Björn A Grüning, David Kranzhöfer, Pedro Schneider, Thomas G Nührenberg, Sonia Mulero-Navarro, Dieter Weichenhan, Christian Braun,[...]. Nat Commun 2018
115
33

Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
Erez Lieberman-Aiden, Nynke L van Berkum, Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner,[...]. Science 2009
33

Complex multi-enhancer contacts captured by genome architecture mapping.
Robert A Beagrie, Antonio Scialdone, Markus Schueler, Dorothee C A Kraemer, Mita Chotalia, Sheila Q Xie, Mariano Barbieri, Inês de Santiago, Liron-Mark Lavitas, Miguel R Branco,[...]. Nature 2017
312
33

Atlas of the clinical genetics of human dilated cardiomyopathy.
Jan Haas, Karen S Frese, Barbara Peil, Wanda Kloos, Andreas Keller, Rouven Nietsch, Zhu Feng, Sabine Müller, Elham Kayvanpour, Britta Vogel,[...]. Eur Heart J 2015
323
33

Dynamic and coordinated epigenetic regulation of developmental transitions in the cardiac lineage.
Joseph A Wamstad, Jeffrey M Alexander, Rebecca M Truty, Avanti Shrikumar, Fugen Li, Kirsten E Eilertson, Huiming Ding, John N Wylie, Alexander R Pico, John A Capra,[...]. Cell 2012
434
33

Mitochondrial oxidative metabolism is required for the cardiac differentiation of stem cells.
Susan Chung, Petras P Dzeja, Randolph S Faustino, Carmen Perez-Terzic, Atta Behfar, Andre Terzic. Nat Clin Pract Cardiovasc Med 2007
346
33

Epigenetic Modifications in Cardiovascular Aging and Diseases.
Weiqi Zhang, Moshi Song, Jing Qu, Guang-Hui Liu. Circ Res 2018
84
33

Genotype-phenotype associations in dilated cardiomyopathy: meta-analysis on more than 8000 individuals.
Elham Kayvanpour, Farbod Sedaghat-Hamedani, Ali Amr, Alan Lai, Jan Haas, Daniel B Holzer, Karen S Frese, Andreas Keller, Katrin Jensen, Hugo A Katus,[...]. Clin Res Cardiol 2017
104
16

An Isochore Framework Underlies Chromatin Architecture.
Kamel Jabbari, Giorgio Bernardi. PLoS One 2017
28
16

Overlap of expression quantitative trait loci (eQTL) in human brain and blood.
Marna McKenzie, Anjali K Henders, Anthony Caracella, Naomi R Wray, Joseph E Powell. BMC Med Genomics 2014
39
16

Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus.
Sofia A Quinodoz, Noah Ollikainen, Barbara Tabak, Ali Palla, Jan Marten Schmidt, Elizabeth Detmar, Mason M Lai, Alexander A Shishkin, Prashant Bhat, Yodai Takei,[...]. Cell 2018
336
16

A majority of m6A residues are in the last exons, allowing the potential for 3' UTR regulation.
Shengdong Ke, Endalkachew A Alemu, Claudia Mertens, Emily Conn Gantman, John J Fak, Aldo Mele, Bhagwattie Haripal, Ilana Zucker-Scharff, Michael J Moore, Christopher Y Park,[...]. Genes Dev 2015
406
16

Biomolecular condensates: organizers of cellular biochemistry.
Salman F Banani, Hyun O Lee, Anthony A Hyman, Michael K Rosen. Nat Rev Mol Cell Biol 2017
16

TNFα signals through specialized factories where responsive coding and miRNA genes are transcribed.
Argyris Papantonis, Takahide Kohro, Sabyasachi Baboo, Joshua D Larkin, Binwei Deng, Patrick Short, Shuichi Tsutsumi, Stephen Taylor, Yasuharu Kanki, Mika Kobayashi,[...]. EMBO J 2012
87
16

Genetic and Epigenetic Control of Heart Development.
Brynn N Akerberg, William T Pu. Cold Spring Harb Perspect Biol 2020
8
16

Mapping 3D genome architecture through in situ DNase Hi-C.
Vijay Ramani, Darren A Cusanovich, Ronald J Hause, Wenxiu Ma, Ruolan Qiu, Xinxian Deng, C Anthony Blau, Christine M Disteche, William S Noble, Jay Shendure,[...]. Nat Protoc 2016
58
16

Post-transcriptional gene regulation by mRNA modifications.
Boxuan Simen Zhao, Ian A Roundtree, Chuan He. Nat Rev Mol Cell Biol 2017
892
16

Dynamic Role of trans Regulation of Gene Expression in Relation to Complex Traits.
Chen Yao, Roby Joehanes, Andrew D Johnson, Tianxiao Huan, Chunyu Liu, Jane E Freedman, Peter J Munson, David E Hill, Marc Vidal, Daniel Levy. Am J Hum Genet 2017
48
16


RBM20 Mutations Induce an Arrhythmogenic Dilated Cardiomyopathy Related to Disturbed Calcium Handling.
Maarten M G van den Hoogenhof, Abdelaziz Beqqali, Ahmad S Amin, Ingeborg van der Made, Simona Aufiero, Mohsin A F Khan, Cees A Schumacher, Joeri A Jansweijer, Karin Y van Spaendonck-Zwarts, Carol Ann Remme,[...]. Circulation 2018
77
16

Neuron-specific impairment of inter-chromosomal pairing and transcription in a novel model of human 15q-duplication syndrome.
Makiko Meguro-Horike, Dag H Yasui, Weston Powell, Diane I Schroeder, Mitsuo Oshimura, Janine M Lasalle, Shin-ichi Horike. Hum Mol Genet 2011
41
16

Cooperative interactions enable singular olfactory receptor expression in mouse olfactory neurons.
Kevin Monahan, Ira Schieren, Jonah Cheung, Alice Mumbey-Wafula, Edwin S Monuki, Stavros Lomvardas. Elife 2017
48
16


Detection and interpretation of expression quantitative trait loci (eQTL).
Jacob J Michaelson, Salvatore Loguercio, Andreas Beyer. Methods 2009
73
16

Interplay of cis and trans mechanisms driving transcription factor binding and gene expression evolution.
Emily S Wong, Bianca M Schmitt, Anastasiya Kazachenka, David Thybert, Aisling Redmond, Frances Connor, Tim F Rayner, Christine Feig, Anne C Ferguson-Smith, John C Marioni,[...]. Nat Commun 2017
31
16

Learn from Your Elders: Developmental Biology Lessons to Guide Maturation of Stem Cell-Derived Cardiomyocytes.
Silvia Marchianò, Alessandro Bertero, Charles E Murry. Pediatr Cardiol 2019
25
16

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.
Dan Dominissini, Sharon Moshitch-Moshkovitz, Schraga Schwartz, Mali Salmon-Divon, Lior Ungar, Sivan Osenberg, Karen Cesarkas, Jasmine Jacob-Hirsch, Ninette Amariglio, Martin Kupiec,[...]. Nature 2012
16

Promoter-bound METTL3 maintains myeloid leukaemia by m6A-dependent translation control.
Isaia Barbieri, Konstantinos Tzelepis, Luca Pandolfini, Junwei Shi, Gonzalo Millán-Zambrano, Samuel C Robson, Demetrios Aspris, Valentina Migliori, Andrew J Bannister, Namshik Han,[...]. Nature 2017
498
16

Interchromosomal interactions and olfactory receptor choice.
Stavros Lomvardas, Gilad Barnea, David J Pisapia, Monica Mendelsohn, Jennifer Kirkland, Richard Axel. Cell 2006
439
16

Dynamic Reorganization of Extremely Long-Range Promoter-Promoter Interactions between Two States of Pluripotency.
Onkar Joshi, Shuang-Yin Wang, Tatyana Kuznetsova, Yaser Atlasi, Tianran Peng, Pierre J Fabre, Ehsan Habibi, Jani Shaik, Sadia Saeed, Lusy Handoko,[...]. Cell Stem Cell 2015
118
16

Heat stress-induced transposon activation correlates with 3D chromatin organization rearrangement in Arabidopsis.
Linhua Sun, Yuqing Jing, Xinyu Liu, Qi Li, Zhihui Xue, Zhukuan Cheng, Daowen Wang, Hang He, Weiqiang Qian. Nat Commun 2020
31
16

Active RNA polymerases: mobile or immobile molecular machines?
Argyris Papantonis, Joshua D Larkin, Youichiro Wada, Yoshihiro Ohta, Sigeo Ihara, Tatsuhiko Kodama, Peter R Cook. PLoS Biol 2010
75
16

Pre-mRNA splicing: awash in a sea of proteins.
Melissa S Jurica, Melissa J Moore. Mol Cell 2003
757
16

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C).
Marieke Simonis, Petra Klous, Erik Splinter, Yuri Moshkin, Rob Willemsen, Elzo de Wit, Bas van Steensel, Wouter de Laat. Nat Genet 2006
898
16

A New Lens for RNA Localization: Liquid-Liquid Phase Separation.
Erin M Langdon, Amy S Gladfelter. Annu Rev Microbiol 2018
59
16

Genome Organization in and around the Nucleolus.
Cristiana Bersaglieri, Raffaella Santoro. Cells 2019
55
16

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure.
Takashi Nagano, Yaniv Lubling, Tim J Stevens, Stefan Schoenfelder, Eitan Yaffe, Wendy Dean, Ernest D Laue, Amos Tanay, Peter Fraser. Nature 2013
842
16

TFIIIC bound DNA elements in nuclear organization and insulation.
Jacob G Kirkland, Jesse R Raab, Rohinton T Kamakaka. Biochim Biophys Acta 2013
34
16

Expressed alleles of imprinted IGF2, DLK1 and MEG3 colocalize in 3D-preserved nuclei of porcine fetal cells.
Yvette Lahbib-Mansais, Harmonie Barasc, Maria Marti-Marimon, Florence Mompart, Eddie Iannuccelli, David Robelin, Juliette Riquet, Martine Yerle-Bouissou. BMC Cell Biol 2016
11
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.