A citation-based method for searching scientific literature

Tannishtha Saha, Devakumar Sundaravinayagam, Michela Di Virgilio. Trends Biochem Sci 2021
Times Cited: 5







List of co-cited articles
12 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


DNA double-strand break response factors influence end-joining features of IgH class switch and general translocation junctions.
Rohit A Panchakshari, Xuefei Zhang, Vipul Kumar, Zhou Du, Pei-Chi Wei, Jennifer Kao, Junchao Dong, Frederick W Alt. Proc Natl Acad Sci U S A 2018
36
60

Mechanism and regulation of class switch recombination.
Janet Stavnezer, Jeroen E J Guikema, Carol E Schrader. Annu Rev Immunol 2008
632
60

Orientation-specific joining of AID-initiated DNA breaks promotes antibody class switching.
Junchao Dong, Rohit A Panchakshari, Tingting Zhang, Yu Zhang, Jiazhi Hu, Sabrina A Volpi, Robin M Meyers, Yu-Jui Ho, Zhou Du, Davide F Robbiani,[...]. Nature 2015
67
40




Mechanisms of programmed DNA lesions and genomic instability in the immune system.
Frederick W Alt, Yu Zhang, Fei-Long Meng, Chunguang Guo, Bjoern Schwer. Cell 2013
275
40

H2AX prevents DNA breaks from progressing to chromosome breaks and translocations.
Sonia Franco, Monica Gostissa, Shan Zha, David B Lombard, Michael M Murphy, Ali A Zarrin, Catherine Yan, Suprawee Tepsuporn, Julio C Morales, Melissa M Adams,[...]. Mol Cell 2006
217
40

Alternative end-joining catalyzes robust IgH locus deletions and translocations in the combined absence of ligase 4 and Ku70.
Cristian Boboila, Mila Jankovic, Catherine T Yan, Jing H Wang, Duane R Wesemann, Tingting Zhang, Alex Fazeli, Lauren Feldman, Andre Nussenzweig, Michel Nussenzweig,[...]. Proc Natl Acad Sci U S A 2010
131
40

IgH class switching and translocations use a robust non-classical end-joining pathway.
Catherine T Yan, Cristian Boboila, Ellen Kris Souza, Sonia Franco, Thomas R Hickernell, Michael Murphy, Sunil Gumaste, Mark Geyer, Ali A Zarrin, John P Manis,[...]. Nature 2007
429
40

Rif1 prevents resection of DNA breaks and promotes immunoglobulin class switching.
Michela Di Virgilio, Elsa Callen, Arito Yamane, Wenzhu Zhang, Mila Jankovic, Alexander D Gitlin, Niklas Feldhahn, Wolfgang Resch, Thiago Y Oliveira, Brian T Chait,[...]. Science 2013
274
40

RPA accumulation during class switch recombination represents 5'-3' DNA-end resection during the S-G2/M phase of the cell cycle.
Arito Yamane, Davide F Robbiani, Wolfgang Resch, Anne Bothmer, Hirotaka Nakahashi, Thiago Oliveira, Philipp C Rommel, Eric J Brown, Andre Nussenzweig, Michel C Nussenzweig,[...]. Cell Rep 2013
67
40

The role of p53 in treatment responses of lung cancer.
Kristina Viktorsson, Luigi De Petris, Rolf Lewensohn. Biochem Biophys Res Commun 2005
117
20


Human Exonuclease 1 (EXO1) Regulatory Functions in DNA Replication with Putative Roles in Cancer.
Guido Keijzers, Daniela Bakula, Michael Angelo Petr, Nils Gedsig Kirkelund Madsen, Amanuel Teklu, Garik Mkrtchyan, Brenna Osborne, Morten Scheibye-Knudsen. Int J Mol Sci 2018
17
20

Acetylation of MORC2 by NAT10 regulates cell-cycle checkpoint control and resistance to DNA-damaging chemotherapy and radiotherapy in breast cancer.
Hong-Yi Liu, Ying-Ying Liu, Fan Yang, Lin Zhang, Fang-Lin Zhang, Xin Hu, Zhi-Min Shao, Da-Qiang Li. Nucleic Acids Res 2020
13
20

TIMER: A Web Server for Comprehensive Analysis of Tumor-Infiltrating Immune Cells.
Taiwen Li, Jingyu Fan, Binbin Wang, Nicole Traugh, Qianming Chen, Jun S Liu, Bo Li, X Shirley Liu. Cancer Res 2017
20

RANK-ligand (RANKL) expression in young breast cancer patients and during pregnancy.
Hatem A Azim, Fedro A Peccatori, Sylvain Brohée, Daniel Branstetter, Sherene Loi, Giuseppe Viale, Martine Piccart, William C Dougall, Giancarlo Pruneri, Christos Sotiriou. Breast Cancer Res 2015
98
20

Identification of Exo1-Msh2 interaction motifs in DNA mismatch repair and new Msh2-binding partners.
Eva M Goellner, Christopher D Putnam, William J Graham, Christine M Rahal, Bin-Zhong Li, Richard D Kolodner. Nat Struct Mol Biol 2018
17
20

STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets.
Damian Szklarczyk, Annika L Gable, David Lyon, Alexander Junge, Stefan Wyder, Jaime Huerta-Cepas, Milan Simonovic, Nadezhda T Doncheva, John H Morris, Peer Bork,[...]. Nucleic Acids Res 2019
20

Potentially functional polymorphisms of EXO1 and risk of lung cancer in a Chinese population: A case-control analysis.
Guangfu Jin, Haifeng Wang, Zhibin Hu, Hongliang Liu, Weiwei Sun, Hongxia Ma, Dan Chen, Ruifen Miao, Tian Tian, Li Jin,[...]. Lung Cancer 2008
26
20

DNA repair genes in astrocytoma tumorigenesis, progression and therapy resistance.
Juliana Ferreira de Sousa, Rodolfo Bortolozo Serafim, Laura Marise de Freitas, Carla Raquel Fontana, Valeria Valente. Genet Mol Biol 2019
6
20

Chromosomal and genomic changes in lung cancer.
Marileila Varella-Garcia. Cell Adh Migr 2010
28
20

Exonuclease 1 and its versatile roles in DNA repair.
Guido Keijzers, Dekang Liu, Lene Juel Rasmussen. Crit Rev Biochem Mol Biol 2016
31
20

The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data.
Ethan Cerami, Jianjiong Gao, Ugur Dogrusoz, Benjamin E Gross, Selcuk Onur Sumer, Bülent Arman Aksoy, Anders Jacobsen, Caitlin J Byrne, Michael L Heuer, Erik Larsson,[...]. Cancer Discov 2012
20

Cancer treatment and survivorship statistics, 2019.
Kimberly D Miller, Leticia Nogueira, Angela B Mariotto, Julia H Rowland, K Robin Yabroff, Catherine M Alfano, Ahmedin Jemal, Joan L Kramer, Rebecca L Siegel. CA Cancer J Clin 2019
20

Therapeutic B cell depletion impairs adaptive and autoreactive CD4+ T cell activation in mice.
Jean-David Bouaziz, Koichi Yanaba, Guglielmo M Venturi, Yaming Wang, Roland M Tisch, Jonathan C Poe, Thomas F Tedder. Proc Natl Acad Sci U S A 2007
227
20

Determinants and clinical implications of chromosomal instability in cancer.
Laurent Sansregret, Bart Vanhaesebroeck, Charles Swanton. Nat Rev Clin Oncol 2018
123
20

Genomic signatures reveal DNA damage response deficiency in colorectal cancer brain metastases.
Jing Sun, Cheng Wang, Yi Zhang, Lingyan Xu, Weijia Fang, Yuping Zhu, Yi Zheng, Xiaofeng Chen, Xiju Xie, Xinhua Hu,[...]. Nat Commun 2019
27
20

Development and validation of a five-gene model to predict postoperative brain metastasis in operable lung adenocarcinoma.
Fangqiu Fu, Yang Zhang, Zhendong Gao, Yue Zhao, Zhexu Wen, Han Han, Yuan Li, Haiquan Chen. Int J Cancer 2020
7
20

Expression signatures of DNA repair genes correlate with survival prognosis of astrocytoma patients.
Juliana Ferreira de Sousa, Raul Torrieri, Rodolfo Bortolozo Serafim, Luis Fernando Macedo Di Cristofaro, Fábio Dalbon Escanfella, Rodrigo Ribeiro, Dalila Lucíola Zanette, Maria Luisa Paçó-Larson, Wilson Araujo da Silva, Daniela Pretti da Cunha Tirapelli,[...]. Tumour Biol 2017
22
20

Therapeutic strategy for non-small-cell lung cancer patients with brain metastases (Review).
Young Hak Kim, Hiroki Nagai, Hiroaki Ozasa, Yuichi Sakamori, Michiaki Mishima. Biomed Rep 2013
7
20

ONCOMINE: a cancer microarray database and integrated data-mining platform.
Daniel R Rhodes, Jianjun Yu, K Shanker, Nandan Deshpande, Radhika Varambally, Debashis Ghosh, Terrence Barrette, Akhilesh Pandey, Arul M Chinnaiyan. Neoplasia 2004
20

Neoadjuvant PD-1 Blockade in Resectable Lung Cancer.
Patrick M Forde, Jamie E Chaft, Kellie N Smith, Valsamo Anagnostou, Tricia R Cottrell, Matthew D Hellmann, Marianna Zahurak, Stephen C Yang, David R Jones, Stephen Broderick,[...]. N Engl J Med 2018
733
20

Nicotine promotes brain metastasis by polarizing microglia and suppressing innate immune function.
Shih-Ying Wu, Fei Xing, Sambad Sharma, Kerui Wu, Abhishek Tyagi, Yin Liu, Dan Zhao, Ravindra Pramod Deshpande, Yusuke Shiozawa, Tamjeed Ahmed,[...]. J Exp Med 2020
13
20

Neoantigen-directed immune escape in lung cancer evolution.
Rachel Rosenthal, Elizabeth Larose Cadieux, Roberto Salgado, Maise Al Bakir, David A Moore, Crispin T Hiley, Tom Lund, Miljana Tanić, James L Reading, Kroopa Joshi,[...]. Nature 2019
295
20

The GeneCards Suite: From Gene Data Mining to Disease Genome Sequence Analyses.
Gil Stelzer, Naomi Rosen, Inbar Plaschkes, Shahar Zimmerman, Michal Twik, Simon Fishilevich, Tsippi Iny Stein, Ron Nudel, Iris Lieder, Yaron Mazor,[...]. Curr Protoc Bioinformatics 2016
801
20

Hypoxia pathway genetic variants predict survival of non-small-cell lung cancer patients receiving platinum-based chemotherapy.
Rong Li, Jiang Gu, John V Heymach, Xiang Shu, Lina Zhao, Baohui Han, Yuanqing Ye, Jack Roth, Xifeng Wu. Carcinogenesis 2017
7
20

Macrophage expression of interleukin-10 is a prognostic factor in nonsmall cell lung cancer.
E Zeni, L Mazzetti, D Miotto, N Lo Cascio, P Maestrelli, P Querzoli, M Pedriali, E De Rosa, L M Fabbri, C E Mapp,[...]. Eur Respir J 2007
73
20

Gene expression profiling of brain metastatic cell from triple negative breast cancer: Understanding the molecular events.
Li Zhou, Hong-Fang Gao, Ding-Sheng Liu, Jin-Yi Feng, Dan-Dan Gao, Wei Xia. Gene 2018
8
20

Identification of key biomarkers and potential molecular mechanisms in lung cancer by bioinformatics analysis.
Zhenhua Li, Meixiang Sang, Ziqiang Tian, Zhao Liu, Jian Lv, Fan Zhang, Baoen Shan. Oncol Lett 2019
6
20

DNA-damage-induced degradation of EXO1 exonuclease limits DNA end resection to ensure accurate DNA repair.
Nozomi Tomimatsu, Bipasha Mukherjee, Janelle Louise Harris, Francesca Ludovica Boffo, Molly Catherine Hardebeck, Patrick Ryan Potts, Kum Kum Khanna, Sandeep Burma. J Biol Chem 2017
31
20

Cancer immunotherapy: Macrophages steal the show.
M Teresa Villanueva. Nat Rev Drug Discov 2017
4
25

Analysis of Lung Adenocarcinoma Subtypes Based on Immune Signatures Identifies Clinical Implications for Cancer Therapy.
Feng Xu, Jie-Xin Chen, Xiong-Bin Yang, Xin-Bin Hong, Zi-Xiong Li, Ling Lin, Yong-Song Chen. Mol Ther Oncolytics 2020
24
20

US lung cancer trends by histologic type.
Manali I Patel, Iona Cheng, Scarlett Lin Gomez. Cancer 2015
14
20

A high density of tertiary lymphoid structure B cells in lung tumors is associated with increased CD4+ T cell receptor repertoire clonality.
Wei Zhu, Claire Germain, Zheng Liu, Yinong Sebastian, Priyanka Devi, Samantha Knockaert, Philip Brohawn, Kim Lehmann, Diane Damotte, Pierre Validire,[...]. Oncoimmunology 2015
47
20

UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival Analyses.
Darshan S Chandrashekar, Bhuwan Bashel, Sai Akshaya Hodigere Balasubramanya, Chad J Creighton, Israel Ponce-Rodriguez, Balabhadrapatruni V S K Chakravarthi, Sooryanarayana Varambally. Neoplasia 2017
20

PCNA promotes processive DNA end resection by Exo1.
Xiaoqing Chen, Sharad C Paudyal, Re-I Chin, Zhongsheng You. Nucleic Acids Res 2013
47
20


EXO1 overexpression is associated with poor prognosis of hepatocellular carcinoma patients.
Yaoyao Dai, Zuxiong Tang, Zongguo Yang, Lan Zhang, Qing Deng, Xiaofeng Zhang, Yongchun Yu, Xing Liu, Junfeng Zhu. Cell Cycle 2018
15
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.