A citation-based method for searching scientific literature

Ana F Castro, Joana R Loureiro, José Bessa, Isabel Silveira. Genes (Basel) 2020
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Therapeutic Strategies for Duchenne Muscular Dystrophy: An Update.
Chengmei Sun, Luoan Shen, Zheng Zhang, Xin Xie. Genes (Basel) 2020
12
50


LMNA Mutations G232E and R482L Cause Dysregulation of Skeletal Muscle Differentiation, Bioenergetics, and Metabolic Gene Expression Profile.
Elena V Ignatieva, Oksana A Ivanova, Margarita Y Komarova, Natalia V Khromova, Dmitrii E Polev, Anna A Kostareva, Alexey Sergushichev, Renata I Dmitrieva. Genes (Basel) 2020
2
50

CRISPR-Generated Animal Models of Duchenne Muscular Dystrophy.
Kenji Rowel Q Lim, Quynh Nguyen, Kasia Dzierlega, Yiqing Huang, Toshifumi Yokota. Genes (Basel) 2020
6
50

Two New Cases of Hypertrophic Cardiomyopathy and Skeletal Muscle Features Associated with ALPK3 Homozygous and Compound Heterozygous Variants.
John Jorholt, Yulia Formicheva, Tatyana Vershinina, Artem Kiselev, Alexey Muravyev, Elena Demchenko, Petr Fedotov, Anna Zlotina, Anton Rygkov, Elena Vasichkina,[...]. Genes (Basel) 2020
6
50

Targeted Next-Generation Sequencing in a Large Cohort of Genetically Undiagnosed Patients with Neuromuscular Disorders in Spain.
Lidia Gonzalez-Quereda, Maria Jose Rodriguez, Jordi Diaz-Manera, Jorge Alonso-Perez, Eduard Gallardo, Andres Nascimento, Carlos Ortez, Daniel Natera-de Benito, Montse Olive, Laura Gonzalez-Mera,[...]. Genes (Basel) 2020
3
50

An Overview of Alternative Splicing Defects Implicated in Myotonic Dystrophy Type I.
Andrea López-Martínez, Patricia Soblechero-Martín, Laura de-la-Puente-Ovejero, Gisela Nogales-Gadea, Virginia Arechavala-Gomeza. Genes (Basel) 2020
5
50

Four Individuals with a Homozygous Mutation in Exon 1f of the PLEC Gene and Associated Myasthenic Features.
Magdalena Mroczek, Hacer Durmus, Ana Töpf, Yesim Parman, Volker Straub. Genes (Basel) 2020
1
100

A Novel Missense Variant Associated with A Splicing Defect in A Myopathic Form of PGK1 Deficiency in The Spanish Population.
Virginia Garcia-Solaesa, Pablo Serrano-Lorenzo, Maria Antonia Ramos-Arroyo, Alberto Blázquez, Inmaculada Pagola-Lorz, Mercè Artigas-López, Joaquín Arenas, Miguel A Martín, Ivonne Jericó-Pascual. Genes (Basel) 2019
3
50

FLNC Expression Level Influences the Activity of TEAD-YAP/TAZ Signaling.
Anastasia Knyazeva, Aleksandr Khudiakov, Raquel Vaz, Aleksey Muravyev, Ksenia Sukhareva, Thomas Sejersen, Anna Kostareva. Genes (Basel) 2020
3
50

3
50

Preliminary Findings on CTG Expansion Determination in Different Tissues from Patients with Myotonic Dystrophy Type 1.
Alfonsina Ballester-Lopez, Emma Koehorst, Ian Linares-Pardo, Judit Núñez-Manchón, Miriam Almendrote, Giuseppe Lucente, Andrea Arbex, Carles Puente, Alejandro Lucia, Darren G Monckton,[...]. Genes (Basel) 2020
1
100


Predominance of Dystrophinopathy Genotypes in Mexican Male Patients Presenting as Muscular Dystrophy with A Normal Multiplex Polymerase Chain Reaction DMD Gene Result: A Study Including Targeted Next-Generation Sequencing.
Miguel Angel Alcántara-Ortigoza, Miriam Erandi Reyna-Fabián, Ariadna González-Del Angel, Bernardette Estandia-Ortega, Cesárea Bermúdez-López, Gabriela Marisol Cruz-Miranda, Matilde Ruíz-García. Genes (Basel) 2019
4
50

The Need for Establishing a Universal CTG Sizing Method in Myotonic Dystrophy Type 1.
Alfonsina Ballester-Lopez, Ian Linares-Pardo, Emma Koehorst, Judit Núñez-Manchón, Guillem Pintos-Morell, Jaume Coll-Cantí, Miriam Almendrote, Giuseppe Lucente, Andrea Arbex, Jonathan J Magaña,[...]. Genes (Basel) 2020
2
50


A transient ischemic environment induces reversible compaction of chromatin.
Ina Kirmes, Aleksander Szczurek, Kirti Prakash, Iryna Charapitsa, Christina Heiser, Michael Musheev, Florian Schock, Karolina Fornalczyk, Dongyu Ma, Udo Birk,[...]. Genome Biol 2015
37
50

Structural basis of polycomb bodies.
J Smigová, P Juda, J Krejčí, I Raška. Folia Biol (Praha) 2014
3
50

In vivo formaldehyde cross-linking: it is time for black box analysis.
Alexey Gavrilov, Sergey V Razin, Giacomo Cavalli. Brief Funct Genomics 2015
35
50

The Interchromatin Compartment Participates in the Structural and Functional Organization of the Cell Nucleus.
Thomas Cremer, Marion Cremer, Barbara Hübner, Asli Silahtaroglu, Michael Hendzel, Christian Lanctôt, Hilmar Strickfaden, Christoph Cremer. Bioessays 2020
16
50


Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs.
John L Rinn, Michael Kertesz, Jordon K Wang, Sharon L Squazzo, Xiao Xu, Samantha A Brugmann, L Henry Goodnough, Jill A Helms, Peggy J Farnham, Eran Segal,[...]. Cell 2007
50

GRID-seq reveals the global RNA-chromatin interactome.
Xiao Li, Bing Zhou, Liang Chen, Lan-Tao Gou, Hairi Li, Xiang-Dong Fu. Nat Biotechnol 2017
102
50

Diversity and Emerging Roles of Enhancer RNA in Regulation of Gene Expression and Cell Fate.
Preston R Arnold, Andrew D Wells, Xian C Li. Front Cell Dev Biol 2020
35
50

A Short Tandem Repeat-Enriched RNA Assembles a Nuclear Compartment to Control Alternative Splicing and Promote Cell Survival.
Karen Yap, Svetlana Mukhina, Gen Zhang, Jason S C Tan, Hong Sheng Ong, Eugene V Makeyev. Mol Cell 2018
40
50

Evidence for a nuclear compartment of transcription and splicing located at chromosome domain boundaries.
R M Zirbel, U R Mathieu, A Kurz, T Cremer, P Lichter. Chromosome Res 1993
191
50

Modes of phase separation affecting chromatin regulation.
Spiros Palikyras, Argyris Papantonis. Open Biol 2019
17
50

Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component.
Christèle Maison, Delphine Bailly, Antoine H F M Peters, Jean-Pierre Quivy, Danièle Roche, Angela Taddei, Monika Lachner, Thomas Jenuwein, Geneviève Almouzni. Nat Genet 2002
523
50

53BP1 exchanges slowly at the sites of DNA damage and appears to require RNA for its association with chromatin.
Fiona Pryde, Shirin Khalili, Kathryn Robertson, Jim Selfridge, Ann-Marie Ritchie, David W Melton, Denis Jullien, Yasuhisa Adachi. J Cell Sci 2005
92
50

RNA nucleation by MSL2 induces selective X chromosome compartmentalization.
Claudia Isabelle Keller Valsecchi, M Felicia Basilicata, Plamen Georgiev, Aline Gaub, Janine Seyfferth, Tanvi Kulkarni, Amol Panhale, Giuseppe Semplicio, Vinitha Manjunath, Herbert Holz,[...]. Nature 2021
6
50

Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus.
Sofia A Quinodoz, Noah Ollikainen, Barbara Tabak, Ali Palla, Jan Marten Schmidt, Elizabeth Detmar, Mason M Lai, Alexander A Shishkin, Prashant Bhat, Yodai Takei,[...]. Cell 2018
263
50

RNA toxicity in non-coding repeat expansion disorders.
Bart Swinnen, Wim Robberecht, Ludo Van Den Bosch. EMBO J 2020
65
50

RNA Droplets.
Kevin Rhine, Velinda Vidaurre, Sua Myong. Annu Rev Biophys 2020
26
50

Long noncoding RNA NEAT1-dependent SFPQ relocation from promoter region to paraspeckle mediates IL8 expression upon immune stimuli.
Katsutoshi Imamura, Naoto Imamachi, Gen Akizuki, Michiko Kumakura, Atsushi Kawaguchi, Kyosuke Nagata, Akihisa Kato, Yasushi Kawaguchi, Hiroki Sato, Misako Yoneda,[...]. Mol Cell 2014
380
50

Long non-coding RNAs in nuclear bodies.
Joanna Y Ip, Shinichi Nakagawa. Dev Growth Differ 2012
91
50

Studying RNA-DNA interactome by Red-C identifies noncoding RNAs associated with various chromatin types and reveals transcription dynamics.
Alexey A Gavrilov, Anastasiya A Zharikova, Aleksandra A Galitsyna, Artem V Luzhin, Natalia M Rubanova, Arkadiy K Golov, Nadezhda V Petrova, Maria D Logacheva, Omar L Kantidze, Sergey V Ulianov,[...]. Nucleic Acids Res 2020
6
50

Phase separation by the polyhomeotic sterile alpha motif compartmentalizes Polycomb Group proteins and enhances their activity.
Elias Seif, Jin Joo Kang, Charles Sasseville, Olga Senkovich, Alexander Kaltashov, Elodie L Boulier, Ibani Kapur, Chongwoo A Kim, Nicole J Francis. Nat Commun 2020
10
50

Widespread transcription at neuronal activity-regulated enhancers.
Tae-Kyung Kim, Martin Hemberg, Jesse M Gray, Allen M Costa, Daniel M Bear, Jing Wu, David A Harmin, Mike Laptewicz, Kellie Barbara-Haley, Scott Kuersten,[...]. Nature 2010
50

Super-resolution binding activated localization microscopy through reversible change of DNA conformation.
Aleksander Szczurek, Udo Birk, Hans Knecht, Jurek Dobrucki, Sabine Mai, Christoph Cremer. Nucleus 2018
9
50

The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome.
Jesse M Engreitz, Amy Pandya-Jones, Patrick McDonel, Alexander Shishkin, Klara Sirokman, Christine Surka, Sabah Kadri, Jeffrey Xing, Alon Goren, Eric S Lander,[...]. Science 2013
588
50

Unraveling the mechanisms of chromatin fibril packaging.
Alexey A Gavrilov, Yuri Y Shevelyov, Sergey V Ulianov, Ekaterina E Khrameeva, Pavel Kos, Alexander Chertovich, Sergey V Razin. Nucleus 2016
5
50

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.
Ewan Birney, John A Stamatoyannopoulos, Anindya Dutta, Roderic Guigó, Thomas R Gingeras, Elliott H Margulies, Zhiping Weng, Michael Snyder, Emmanouil T Dermitzakis, Robert E Thurman,[...]. Nature 2007
50

Coding RNAs with a non-coding function: maintenance of open chromatin structure.
Maïwen Caudron-Herger, Katharina Müller-Ott, Jan-Philipp Mallm, Caroline Marth, Ute Schmidt, Katalin Fejes-Tóth, Karsten Rippe. Nucleus 2011
31
50

Nuclear Editing of mRNA 3'-UTRs.
Ling-Ling Chen, Gordon G Carmichael. Curr Top Microbiol Immunol 2012
10
50

Core filaments of the nuclear matrix.
D C He, J A Nickerson, S Penman. J Cell Biol 1990
405
50

An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.
Christine M Clemson, John N Hutchinson, Sergio A Sara, Alexander W Ensminger, Archa H Fox, Andrew Chess, Jeanne B Lawrence. Mol Cell 2009
868
50


Nuclear condensates of the Polycomb protein chromobox 2 (CBX2) assemble through phase separation.
Roubina Tatavosian, Samantha Kent, Kyle Brown, Tingting Yao, Huy Nguyen Duc, Thao Ngoc Huynh, Chao Yu Zhen, Brian Ma, Haobin Wang, Xiaojun Ren. J Biol Chem 2019
115
50

Site-specific DICER and DROSHA RNA products control the DNA-damage response.
Sofia Francia, Flavia Michelini, Alka Saxena, Dave Tang, Michiel de Hoon, Viviana Anelli, Marina Mione, Piero Carninci, Fabrizio d'Adda di Fagagna. Nature 2012
322
50

RNA immunoprecipitation for determining RNA-protein associations in vivo.
Chris Gilbert, Jesper Q Svejstrup. Curr Protoc Mol Biol 2006
59
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.