A citation-based method for searching scientific literature

Elizabeth A Stivison, Kati J Young, Lorraine S Symington. Nucleic Acids Res 2020
Times Cited: 6







List of co-cited articles
76 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Break-induced replication and telomerase-independent telomere maintenance require Pol32.
John R Lydeard, Suvi Jain, Miyuki Yamaguchi, James E Haber. Nature 2007
342
83

Tracking break-induced replication shows that it stalls at roadblocks.
Liping Liu, Zhenxin Yan, Beth A Osia, Jerzy Twarowski, Luyang Sun, Juraj Kramara, Rosemary S Lee, Sandeep Kumar, Rajula Elango, Hanzeng Li,[...]. Nature 2021
14
83

Migrating bubble during break-induced replication drives conservative DNA synthesis.
Natalie Saini, Sreejith Ramakrishnan, Rajula Elango, Sandeep Ayyar, Yu Zhang, Angela Deem, Grzegorz Ira, James E Haber, Kirill S Lobachev, Anna Malkova. Nature 2013
216
83

Break-induced replication occurs by conservative DNA synthesis.
Roberto A Donnianni, Lorraine S Symington. Proc Natl Acad Sci U S A 2013
119
83

Mechanisms restraining break-induced replication at two-ended DNA double-strand breaks.
Nhung Pham, Zhenxin Yan, Yang Yu, Mosammat Faria Afreen, Anna Malkova, James E Haber, Grzegorz Ira. EMBO J 2021
10
83

Break-induced replication repair of damaged forks induces genomic duplications in human cells.
Lorenzo Costantino, Sotirios K Sotiriou, Juha K Rantala, Simon Magin, Emil Mladenov, Thomas Helleday, James E Haber, George Iliakis, Olli P Kallioniemi, Thanos D Halazonetis. Science 2014
277
83

PIF1 helicase promotes break-induced replication in mammalian cells.
Shibo Li, Hailong Wang, Sanaa Jehi, Jun Li, Shuo Liu, Zi Wang, Lan Truong, Takuya Chiba, Zefeng Wang, Xiaohua Wu. EMBO J 2021
13
66

Pif1 helicase and Polδ promote recombination-coupled DNA synthesis via bubble migration.
Marenda A Wilson, YoungHo Kwon, Yuanyuan Xu, Woo-Hyun Chung, Peter Chi, Hengyao Niu, Ryan Mayle, Xuefeng Chen, Anna Malkova, Patrick Sung,[...]. Nature 2013
199
66


Chromosome rearrangements via template switching between diverged repeated sequences.
Ranjith P Anand, Olga Tsaponina, Patricia W Greenwell, Cheng-Sheng Lee, Wei Du, Thomas D Petes, James E Haber. Genes Dev 2014
70
66

Break-induced replication is highly inaccurate.
Angela Deem, Andrea Keszthelyi, Tiffany Blackgrove, Alexandra Vayl, Barbara Coffey, Ruchi Mathur, Andrei Chabes, Anna Malkova. PLoS Biol 2011
188
66

Dynamic Processing of Displacement Loops during Recombinational DNA Repair.
Aurèle Piazza, Shanaya Shital Shah, William Douglass Wright, Steven K Gore, Romain Koszul, Wolf-Dietrich Heyer. Mol Cell 2019
44
66

RAD52 Facilitates Mitotic DNA Synthesis Following Replication Stress.
Rahul Bhowmick, Sheroy Minocherhomji, Ian D Hickson. Mol Cell 2016
184
66

Template switching during break-induced replication.
Catherine E Smith, Bertrand Llorente, Lorraine S Symington. Nature 2007
244
66

Defective break-induced replication leads to half-crossovers in Saccharomyces cerevisiae.
Angela Deem, Krista Barker, Kelly Vanhulle, Brandon Downing, Alexandra Vayl, Anna Malkova. Genetics 2008
75
50


Alternative lengthening of human telomeres is a conservative DNA replication process with features of break-induced replication.
Fani-Marlen Roumelioti, Sotirios K Sotiriou, Vasiliki Katsini, Maria Chiourea, Thanos D Halazonetis, Sarantis Gagos. EMBO Rep 2016
84
50

Mechanism and regulation of DNA end resection in eukaryotes.
Lorraine S Symington. Crit Rev Biochem Mol Biol 2016
204
50

Rad51-mediated double-strand break repair and mismatch correction of divergent substrates.
Ranjith Anand, Annette Beach, Kevin Li, James Haber. Nature 2017
63
50

Mechanisms and regulation of mitotic recombination in Saccharomyces cerevisiae.
Lorraine S Symington, Rodney Rothstein, Michael Lisby. Genetics 2014
207
50


Patterns of somatic structural variation in human cancer genomes.
Yilong Li, Nicola D Roberts, Jeremiah A Wala, Ofer Shapira, Steven E Schumacher, Kiran Kumar, Ekta Khurana, Sebastian Waszak, Jan O Korbel, James E Haber,[...]. Nature 2020
151
50

DNA REPAIR. Mus81 and converging forks limit the mutagenicity of replication fork breakage.
Ryan Mayle, Ian M Campbell, Christine R Beck, Yang Yu, Marenda Wilson, Chad A Shaw, Lotte Bjergbaek, James R Lupski, Grzegorz Ira. Science 2015
125
50

Inverted DNA repeats channel repair of distant double-strand breaks into chromatid fusions and chromosomal rearrangements.
Kelly VanHulle, Francene J Lemoine, Vidhya Narayanan, Brandon Downing, Krista Hull, Christy McCullough, Melissa Bellinger, Kirill Lobachev, Thomas D Petes, Anna Malkova. Mol Cell Biol 2007
82
50


The role of break-induced replication in large-scale expansions of (CAG)n/(CTG)n repeats.
Jane C Kim, Samantha T Harris, Teresa Dinter, Kartik A Shah, Sergei M Mirkin. Nat Struct Mol Biol 2017
50
50

Break-induced telomere synthesis underlies alternative telomere maintenance.
Robert L Dilley, Priyanka Verma, Nam Woo Cho, Harrison D Winters, Anne R Wondisford, Roger A Greenberg. Nature 2016
209
50

Break-induced DNA replication.
Ranjith P Anand, Susan T Lovett, James E Haber. Cold Spring Harb Perspect Biol 2013
147
50

Replication stress activates DNA repair synthesis in mitosis.
Sheroy Minocherhomji, Songmin Ying, Victoria A Bjerregaard, Sara Bursomanno, Aiste Aleliunaite, Wei Wu, Hocine W Mankouri, Huahao Shen, Ying Liu, Ian D Hickson. Nature 2015
293
50

Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast.
Grzegorz Ira, Anna Malkova, Giordano Liberi, Marco Foiani, James E Haber. Cell 2003
451
33

Yeast Mph1 helicase dissociates Rad51-made D-loops: implications for crossover control in mitotic recombination.
Rohit Prakash, Dominik Satory, Eloïse Dray, Almas Papusha, Jürgen Scheller, Wilfried Kramer, Lumir Krejci, Hannah Klein, James E Haber, Patrick Sung,[...]. Genes Dev 2009
185
33

Break-induced replication is a source of mutation clusters underlying kataegis.
Cynthia J Sakofsky, Steven A Roberts, Ewa Malc, Piotr A Mieczkowski, Michael A Resnick, Dmitry A Gordenin, Anna Malkova. Cell Rep 2014
106
33

Translesion Polymerases Drive Microhomology-Mediated Break-Induced Replication Leading to Complex Chromosomal Rearrangements.
Cynthia J Sakofsky, Sandeep Ayyar, Angela K Deem, Woo-Hyun Chung, Grzegorz Ira, Anna Malkova. Mol Cell 2015
69
33


RAD51-dependent break-induced replication differs in kinetics and checkpoint responses from RAD51-mediated gene conversion.
Anna Malkova, Maria L Naylor, Miyuki Yamaguchi, Grzegorz Ira, James E Haber. Mol Cell Biol 2005
128
33

DNA strand annealing is promoted by the yeast Rad52 protein.
U H Mortensen, C Bendixen, I Sunjevaric, R Rothstein. Proc Natl Acad Sci U S A 1996
368
33


Template switching during break-induced replication is promoted by the Mph1 helicase in Saccharomyces cerevisiae.
Anamarija Stafa, Roberto A Donnianni, Leonid A Timashev, Alicia F Lam, Lorraine S Symington. Genetics 2014
41
33

Rad52 promotes second-end DNA capture in double-stranded break repair to form complement-stabilized joint molecules.
Amitabh V Nimonkar, R Alejandro Sica, Stephen C Kowalczykowski. Proc Natl Acad Sci U S A 2009
57
33


Break induced replication in eukaryotes: mechanisms, functions, and consequences.
Cynthia J Sakofsky, Anna Malkova. Crit Rev Biochem Mol Biol 2017
79
33

A Rad51-independent pathway promotes single-strand template repair in gene editing.
Danielle N Gallagher, Nhung Pham, Annie M Tsai, Nicolas V Janto, Jihyun Choi, Grzegorz Ira, James E Haber. PLoS Genet 2020
11
33



High-resolution mapping of mitotic DNA synthesis regions and common fragile sites in the human genome through direct sequencing.
Morgane Macheret, Rahul Bhowmick, Katarzyna Sobkowiak, Laura Padayachy, Jonathan Mailler, Ian D Hickson, Thanos D Halazonetis. Cell Res 2020
26
33

Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends.
Zhu Zhu, Woo-Hyun Chung, Eun Yong Shim, Sang Eun Lee, Grzegorz Ira. Cell 2008
737
33



RAD51-dependent break-induced replication in yeast.
Allison P Davis, Lorraine S Symington. Mol Cell Biol 2004
139
33

Cohesin Is limiting for the suppression of DNA damage-induced recombination between homologous chromosomes.
Shay Covo, James W Westmoreland, Dmitry A Gordenin, Michael A Resnick. PLoS Genet 2010
62
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.