A citation-based method for searching scientific literature

Ana Belen Malpartida, Matthew Williamson, Derek P Narendra, Richard Wade-Martins, Brent J Ryan. Trends Biochem Sci 2021
Times Cited: 20







List of co-cited articles
119 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


LRRK2 mutations impair depolarization-induced mitophagy through inhibition of mitochondrial accumulation of RAB10.
Fieke Wauters, Tom Cornelissen, Dorien Imberechts, Shaun Martin, Brianada Koentjoro, Carolyn Sue, Peter Vangheluwe, Wim Vandenberghe. Autophagy 2020
41
15

PARIS (ZNF746) repression of PGC-1α contributes to neurodegeneration in Parkinson's disease.
Joo-Ho Shin, Han Seok Ko, Hochul Kang, Yunjong Lee, Yun-Il Lee, Olga Pletinkova, Juan C Troconso, Valina L Dawson, Ted M Dawson. Cell 2011
601
15

Mechanism of parkin activation by PINK1.
Christina Gladkova, Sarah L Maslen, J Mark Skehel, David Komander. Nature 2018
103
15

Mechanism of phospho-ubiquitin-induced PARKIN activation.
Tobias Wauer, Michal Simicek, Alexander Schubert, David Komander. Nature 2015
232
15

Hereditary early-onset Parkinson's disease caused by mutations in PINK1.
Enza Maria Valente, Patrick M Abou-Sleiman, Viviana Caputo, Miratul M K Muqit, Kirsten Harvey, Suzana Gispert, Zeeshan Ali, Domenico Del Turco, Anna Rita Bentivoglio, Daniel G Healy,[...]. Science 2004
15

The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy.
Michael Lazarou, Danielle A Sliter, Lesley A Kane, Shireen A Sarraf, Chunxin Wang, Jonathon L Burman, Dionisia P Sideris, Adam I Fogel, Richard J Youle. Nature 2015
15

Mutations in the parkin gene cause autosomal recessive juvenile parkinsonism.
T Kitada, S Asakawa, N Hattori, H Matsumine, Y Yamamura, S Minoshima, M Yokochi, Y Mizuno, N Shimizu. Nature 1998
15

Mitophagy and Quality Control Mechanisms in Mitochondrial Maintenance.
Sarah Pickles, Pierre Vigié, Richard J Youle. Curr Biol 2018
545
15

Mechanisms of mitophagy in cellular homeostasis, physiology and pathology.
Konstantinos Palikaras, Eirini Lionaki, Nektarios Tavernarakis. Nat Cell Biol 2018
320
15

Parkin and PINK1 mitigate STING-induced inflammation.
Danielle A Sliter, Jennifer Martinez, Ling Hao, Xi Chen, Nuo Sun, Tara D Fischer, Jonathon L Burman, Yan Li, Zhe Zhang, Derek P Narendra,[...]. Nature 2018
399
15

Microglia clear neuron-released α-synuclein via selective autophagy and prevent neurodegeneration.
Insup Choi, Yuanxi Zhang, Steven P Seegobin, Mathilde Pruvost, Qian Wang, Kerry Purtell, Bin Zhang, Zhenyu Yue. Nat Commun 2020
66
15

Effect of resveratrol on mitochondrial function: implications in parkin-associated familiar Parkinson's disease.
Anna Ferretta, Antonio Gaballo, Paola Tanzarella, Claudia Piccoli, Nazzareno Capitanio, Beatrice Nico, Tiziana Annese, Marco Di Paola, Claudia Dell'aquila, Michele De Mari,[...]. Biochim Biophys Acta 2014
133
10

Functional Impairment in Miro Degradation and Mitophagy Is a Shared Feature in Familial and Sporadic Parkinson's Disease.
Chung-Han Hsieh, Atossa Shaltouki, Ashley E Gonzalez, Alexandre Bettencourt da Cruz, Lena F Burbulla, Erica St Lawrence, Birgitt Schüle, Dimitri Krainc, Theo D Palmer, Xinnan Wang. Cell Stem Cell 2016
219
10


Structural and Functional Impact of Parkinson Disease-Associated Mutations in the E3 Ubiquitin Ligase Parkin.
Fabienne C Fiesel, Thomas R Caulfield, Elisabeth L Moussaud-Lamodière, Kotaro Ogaki, Daniel F A R Dourado, Samuel C Flores, Owen A Ross, Wolfdieter Springer. Hum Mutat 2015
47
10

PINK1 Primes Parkin-Mediated Ubiquitination of PARIS in Dopaminergic Neuronal Survival.
Yunjong Lee, Daniel A Stevens, Sung-Ung Kang, Haisong Jiang, Yun-Il Lee, Han Seok Ko, Leslie A Scarffe, George E Umanah, Hojin Kang, Sangwoo Ham,[...]. Cell Rep 2017
87
10

Mitochondrial Dysfunction in Parkinson's Disease: Focus on Mitochondrial DNA.
Olga Buneeva, Valerii Fedchenko, Arthur Kopylov, Alexei Medvedev. Biomedicines 2020
6
33

Lewy pathology in Parkinson's disease consists of crowded organelles and lipid membranes.
Sarah H Shahmoradian, Amanda J Lewis, Christel Genoud, Jürgen Hench, Tim E Moors, Paula P Navarro, Daniel Castaño-Díez, Gabriel Schweighauser, Alexandra Graff-Meyer, Kenneth N Goldie,[...]. Nat Neurosci 2019
219
10

Parkin loss leads to PARIS-dependent declines in mitochondrial mass and respiration.
Daniel A Stevens, Yunjong Lee, Ho Chul Kang, Byoung Dae Lee, Yun-Il Lee, Aaron Bower, Haisong Jiang, Sung-Ung Kang, Shaida A Andrabi, Valina L Dawson,[...]. Proc Natl Acad Sci U S A 2015
135
10

Reduced mitochondrial DNA copy number is a biomarker of Parkinson's disease.
Angela Pyle, Haidyan Anugrha, Marzena Kurzawa-Akanbi, Alison Yarnall, David Burn, Gavin Hudson. Neurobiol Aging 2016
107
10

Loss of Parkinson's disease-associated protein CHCHD2 affects mitochondrial crista structure and destabilizes cytochrome c.
Hongrui Meng, Chikara Yamashita, Kahori Shiba-Fukushima, Tsuyoshi Inoshita, Manabu Funayama, Shigeto Sato, Tomohisa Hatta, Tohru Natsume, Masataka Umitsu, Junichi Takagi,[...]. Nat Commun 2017
58
10

Nutrient control of glucose homeostasis through a complex of PGC-1alpha and SIRT1.
Joseph T Rodgers, Carlos Lerin, Wilhelm Haas, Steven P Gygi, Bruce M Spiegelman, Pere Puigserver. Nature 2005
10


Ubiquitin is phosphorylated by PINK1 to activate parkin.
Fumika Koyano, Kei Okatsu, Hidetaka Kosako, Yasushi Tamura, Etsu Go, Mayumi Kimura, Yoko Kimura, Hikaru Tsuchiya, Hidehito Yoshihara, Takatsugu Hirokawa,[...]. Nature 2014
791
10

PINK1 phosphorylates ubiquitin to activate Parkin E3 ubiquitin ligase activity.
Lesley A Kane, Michael Lazarou, Adam I Fogel, Yan Li, Koji Yamano, Shireen A Sarraf, Soojay Banerjee, Richard J Youle. J Cell Biol 2014
654
10

Evidence for polymerase gamma, POLG1 variation in reduced mitochondrial DNA copy number in Parkinson's disease.
Ya-Xing Gui, Zhong-Ping Xu, Wen Lv, Jin-Jia Zhao, Xing-Yue Hu. Parkinsonism Relat Disord 2015
24
10

Building and decoding ubiquitin chains for mitophagy.
J Wade Harper, Alban Ordureau, Jin-Mi Heo. Nat Rev Mol Cell Biol 2018
213
10

Mitochondrial DNA Depletion in Respiratory Chain-Deficient Parkinson Disease Neurons.
Anne Grünewald, Karolina A Rygiel, Philippa D Hepplewhite, Christopher M Morris, Martin Picard, Doug M Turnbull. Ann Neurol 2016
109
10

Defective mitochondrial DNA homeostasis in the substantia nigra in Parkinson disease.
Christian Dölle, Irene Flønes, Gonzalo S Nido, Hrvoje Miletic, Nelson Osuagwu, Stine Kristoffersen, Peer K Lilleng, Jan Petter Larsen, Ole-Bjørn Tysnes, Kristoffer Haugarvoll,[...]. Nat Commun 2016
112
10

Parkin is activated by PINK1-dependent phosphorylation of ubiquitin at Ser65.
Agne Kazlauskaite, Chandana Kondapalli, Robert Gourlay, David G Campbell, Maria Stella Ritorto, Kay Hofmann, Dario R Alessi, Axel Knebel, Matthias Trost, Miratul M K Muqit. Biochem J 2014
456
10

LRRK2 impairs PINK1/Parkin-dependent mitophagy via its kinase activity: pathologic insights into Parkinson's disease.
Fiona Bonello, Sidi-Mohamed Hassoun, François Mouton-Liger, Yea Seul Shin, Adeline Muscat, Christelle Tesson, Suzanne Lesage, Philip M Beart, Alexis Brice, Johannes Krupp,[...]. Hum Mol Genet 2019
54
10

Mechanisms controlling mitochondrial biogenesis and respiration through the thermogenic coactivator PGC-1.
Z Wu, P Puigserver, U Andersson, C Zhang, G Adelmant, V Mootha, A Troy, S Cinti, B Lowell, R C Scarpulla,[...]. Cell 1999
10

A new pathway for mitochondrial quality control: mitochondrial-derived vesicles.
Ayumu Sugiura, Gian-Luca McLelland, Edward A Fon, Heidi M McBride. EMBO J 2014
348
10

Mitochondria: in sickness and in health.
Jodi Nunnari, Anu Suomalainen. Cell 2012
10


Parkin is recruited selectively to impaired mitochondria and promotes their autophagy.
Derek Narendra, Atsushi Tanaka, Der-Fen Suen, Richard J Youle. J Cell Biol 2008
10

Deciphering the Molecular Signals of PINK1/Parkin Mitophagy.
Thanh N Nguyen, Benjamin S Padman, Michael Lazarou. Trends Cell Biol 2016
235
10

MTORC1 Regulates both General Autophagy and Mitophagy Induction after Oxidative Phosphorylation Uncoupling.
Alberto Bartolomé, Ana García-Aguilar, Shun-Ichiro Asahara, Yoshiaki Kido, Carlos Guillén, Utpal B Pajvani, Manuel Benito. Mol Cell Biol 2017
53
10

A unified nomenclature for yeast autophagy-related genes.
Daniel J Klionsky, James M Cregg, William A Dunn, Scott D Emr, Yasuyoshi Sakai, Ignacio V Sandoval, Andrei Sibirny, Suresh Subramani, Michael Thumm, Marten Veenhuis,[...]. Dev Cell 2003
797
10

Outstanding Questions in Mitophagy: What We Do and Do Not Know.
Lambert Montava-Garriga, Ian G Ganley. J Mol Biol 2020
53
10

Mitophagy is primarily due to alternative autophagy and requires the MAPK1 and MAPK14 signaling pathways.
Yuko Hirota, Shun-ichi Yamashita, Yusuke Kurihara, Xiulian Jin, Masamune Aihara, Tetsu Saigusa, Dongchon Kang, Tomotake Kanki. Autophagy 2015
96
10

Mitochondrial biogenesis: An update.
Lucia-Doina Popov. J Cell Mol Med 2020
45
10

Targeting mitophagy in Parkinson's disease.
Emily H Clark, Aurelio Vázquez de la Torre, Tamaki Hoshikawa, Thomas Briston. J Biol Chem 2021
5
40

TFEB links autophagy to lysosomal biogenesis.
Carmine Settembre, Chiara Di Malta, Vinicia Assunta Polito, Moises Garcia Arencibia, Francesco Vetrini, Serkan Erdin, Serpil Uckac Erdin, Tuong Huynh, Diego Medina, Pasqualina Colella,[...]. Science 2011
10

Dynamics and diversity in autophagy mechanisms: lessons from yeast.
Hitoshi Nakatogawa, Kuninori Suzuki, Yoshiaki Kamada, Yoshinori Ohsumi. Nat Rev Mol Cell Biol 2009
10


Bcl-2 antiapoptotic proteins inhibit Beclin 1-dependent autophagy.
Sophie Pattingre, Amina Tassa, Xueping Qu, Rita Garuti, Xiao Huan Liang, Noboru Mizushima, Milton Packer, Michael D Schneider, Beth Levine. Cell 2005
10

Integrated DNA methylation and gene expression profiling across multiple brain regions implicate novel genes in Alzheimer's disease.
Stephen A Semick, Rahul A Bharadwaj, Leonardo Collado-Torres, Ran Tao, Joo Heon Shin, Amy Deep-Soboslay, James R Weiss, Daniel R Weinberger, Thomas M Hyde, Joel E Kleinman,[...]. Acta Neuropathol 2019
20
10

The multi-faceted role of mitochondria in the pathology of Parkinson's disease.
Dennison Trinh, Ahmad R Israwi, Lindsay R Arathoon, Jacqueline A Gleave, Joanne E Nash. J Neurochem 2021
7
28

Mitochondria dysfunction in the pathogenesis of Alzheimer's disease: recent advances.
Wenzhang Wang, Fanpeng Zhao, Xiaopin Ma, George Perry, Xiongwei Zhu. Mol Neurodegener 2020
95
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.