A citation-based method for searching scientific literature

Luke McAlary, Yee Lian Chew, Jeremy Stephen Lum, Nicholas John Geraghty, Justin John Yerbury, Neil R Cashman. Front Cell Neurosci 2020
Times Cited: 6







List of co-cited articles
12 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


ALS Genetics: Gains, Losses, and Implications for Future Therapies.
Garam Kim, Olivia Gautier, Eduardo Tassoni-Tsuchida, X Rosa Ma, Aaron D Gitler. Neuron 2020
51
50

Zinc induces depletion and aggregation of endogenous TDP-43.
Aphrodite Caragounis, Katherine Ann Price, Cynthia P W Soon, Gulay Filiz, Colin L Masters, Qiao-Xin Li, Peter J Crouch, Anthony R White. Free Radic Biol Med 2010
39
33

Isomerization of the Asp7 residue results in zinc-induced oligomerization of Alzheimer's disease amyloid beta(1-16) peptide.
Philipp O Tsvetkov, Igor A Popov, Eugene N Nikolaev, Alexander I Archakov, Alexander A Makarov, Sergey A Kozin. Chembiochem 2008
43
33

Molecular basis of UG-rich RNA recognition by the human splicing factor TDP-43.
Peter J Lukavsky, Dalia Daujotyte, James R Tollervey, Jernej Ule, Cristiana Stuani, Emanuele Buratti, Francisco E Baralle, Fred F Damberger, Frédéric H-T Allain. Nat Struct Mol Biol 2013
164
33

Physiological functions and pathobiology of TDP-43 and FUS/TLS proteins.
Antonia Ratti, Emanuele Buratti. J Neurochem 2016
182
33

Zinc binding to RNA recognition motif of TDP-43 induces the formation of amyloid-like aggregates.
Cyrille Garnier, François Devred, Deborah Byrne, Rémy Puppo, Andrei Yu Roman, Soazig Malesinski, Andrey V Golovin, Régine Lebrun, Natalia N Ninkina, Philipp O Tsvetkov. Sci Rep 2017
30
33

Amyotrophic Lateral Sclerosis.
Robert H Brown, Ammar Al-Chalabi. N Engl J Med 2017
592
33

Risk factors for amyotrophic lateral sclerosis.
Caroline Ingre, Per M Roos, Fredrik Piehl, Freya Kamel, Fang Fang. Clin Epidemiol 2015
181
33

ALS Genetics, Mechanisms, and Therapeutics: Where Are We Now?
Rita Mejzini, Loren L Flynn, Ianthe L Pitout, Sue Fletcher, Steve D Wilton, P Anthony Akkari. Front Neurosci 2019
147
33

Mutations in Cu/Zn superoxide dismutase gene are associated with familial amyotrophic lateral sclerosis.
D R Rosen, T Siddique, D Patterson, D A Figlewicz, P Sapp, A Hentati, D Donaldson, J Goto, J P O'Regan, H X Deng. Nature 1993
33

Reactive Astrocytes Promote ALS-like Degeneration and Intracellular Protein Aggregation in Human Motor Neurons by Disrupting Autophagy through TGF-β1.
Pratibha Tripathi, Natalia Rodriguez-Muela, Joseph R Klim, A Sophie de Boer, Sahil Agrawal, Jackson Sandoe, Claudia S Lopes, Karolyn Sassi Ogliari, Luis A Williams, Matthew Shear,[...]. Stem Cell Reports 2017
51
33

Micro-RNAs secreted through astrocyte-derived extracellular vesicles cause neuronal network degeneration in C9orf72 ALS.
André Varcianna, Monika A Myszczynska, Lydia M Castelli, Brendan O'Neill, Yeseul Kim, Jordan Talbot, Sophie Nyberg, Immanuelle Nyamali, Paul R Heath, Matthew J Stopford,[...]. EBioMedicine 2019
61
33

TDP-43 aggregation in neurodegeneration: are stress granules the key?
Colleen M Dewey, Basar Cenik, Chantelle F Sephton, Brett A Johnson, Joachim Herz, Gang Yu. Brain Res 2012
137
16

Improved side-chain torsion potentials for the Amber ff99SB protein force field.
Kresten Lindorff-Larsen, Stefano Piana, Kim Palmo, Paul Maragakis, John L Klepeis, Ron O Dror, David E Shaw. Proteins 2010
16

The role of TDP-43 in the pathogenesis of ALS and FTLD.
Marco Baralle, Emanuele Buratti, Francisco E Baralle. Biochem Soc Trans 2013
48
16


The elusive tau molecular structures: can we translate the recent breakthroughs into new targets for intervention?
Yann Fichou, Youssra K Al-Hilaly, François Devred, Caroline Smet-Nocca, Philipp O Tsvetkov, Joke Verelst, Joris Winderickx, Nick Geukens, Eugeen Vanmechelen, Audrey Perrotin,[...]. Acta Neuropathol Commun 2019
28
16

[Thermodynamics of zinc binding to human S100A2].
F O Tsvetkov, F Devred, A A Makarov. Mol Biol (Mosk) 2010
3
33

Zinc-finger proteins in health and disease.
Matteo Cassandri, Artem Smirnov, Flavia Novelli, Consuelo Pitolli, Massimiliano Agostini, Michal Malewicz, Gerry Melino, Giuseppe Raschellà. Cell Death Discov 2017
183
16

Minimal Zn(2+) binding site of amyloid-β.
Philipp O Tsvetkov, Alexandra A Kulikova, Andrey V Golovin, Yaroslav V Tkachev, Alexander I Archakov, Sergey A Kozin, Alexander A Makarov. Biophys J 2010
63
16

Structural Survey of Zinc Containing Proteins and the Development of the Zinc AMBER Force Field (ZAFF).
Martin B Peters, Yue Yang, Bing Wang, László Füsti-Molnár, Michael N Weaver, Kenneth M Merz. J Chem Theory Comput 2010
225
16

Phosphorylation of Ser8 promotes zinc-induced dimerization of the amyloid-β metal-binding domain.
Alexandra A Kulikova, Philipp O Tsvetkov, Maria I Indeykina, Igor A Popov, Sergey S Zhokhov, Andrey V Golovin, Vladimir I Polshakov, Sergey A Kozin, Evgeny Nudler, Alexander A Makarov. Mol Biosyst 2014
25
16

Parametrization of DFTB3/3OB for magnesium and zinc for chemical and biological applications.
Xiya Lu, Michael Gaus, Marcus Elstner, Qiang Cui. J Phys Chem B 2015
65
16

Zinc-induced dimerization of the amyloid-β metal-binding domain 1-16 is mediated by residues 11-14.
Sergey A Kozin, Yuri V Mezentsev, Alexandra A Kulikova, Maria I Indeykina, Andrey V Golovin, Alexis S Ivanov, Philipp O Tsvetkov, Alexander A Makarov. Mol Biosyst 2011
42
16

High-resolution NMR studies of the zinc-binding site of the Alzheimer's amyloid beta-peptide.
Jens Danielsson, Roberta Pierattelli, Lucia Banci, Astrid Gräslund. FEBS J 2007
166
16

A time-independent free energy estimator for metadynamics.
Pratyush Tiwary, Michele Parrinello. J Phys Chem B 2015
193
16

New QM/MM implementation of the DFTB3 method in the gromacs package.
Tomáš Kubař, Kai Welke, Gerrit Groenhof. J Comput Chem 2015
27
16

DFTB3: Extension of the self-consistent-charge density-functional tight-binding method (SCC-DFTB).
Michael Gaus, Qiang Cui, Marcus Elstner. J Chem Theory Comput 2012
436
16

Copper, iron and zinc in Alzheimer's disease senile plaques.
M A Lovell, J D Robertson, W J Teesdale, J L Campbell, W R Markesbery. J Neurol Sci 1998
16

Cu and Zn coordination to amyloid peptides: From fascinating chemistry to debated pathological relevance.
Elena Atrián-Blasco, Paulina Gonzalez, Alice Santoro, Bruno Alies, Peter Faller, Christelle Hureau. Coord Chem Rev 2018
67
16

Folding of the RNA recognition motif (RRM) domains of the amyotrophic lateral sclerosis (ALS)-linked protein TDP-43 reveals an intermediate state.
Brian C Mackness, Meme T Tran, Shannan P McClain, C Robert Matthews, Jill A Zitzewitz. J Biol Chem 2014
26
16

Zinc induced structural changes in the intrinsically disordered BDNF Met prodomain confer synaptic elimination.
Jing Wang, Agustin Anastasia, Henrietta Bains, Joanna I Giza, David G Clossey, Jingjing Deng, Thomas A Neubert, William J Rice, Francis S Lee, Barbara L Hempstead,[...]. Metallomics 2020
1
100

Crosstalk between nitric oxide and zinc pathways to neuronal cell death involving mitochondrial dysfunction and p38-activated K+ channels.
Ella Bossy-Wetzel, Maria V Talantova, Wilson D Lee, Marion N Schölzke, Anne Harrop, Emily Mathews, Thomas Götz, Jiahuai Han, Mark H Ellisman, Guy A Perkins,[...]. Neuron 2004
295
16

TDP-43 pathology in Alzheimer's disease, dementia with Lewy bodies and ageing.
Kirsty E McAleese, Lauren Walker, Daniel Erskine, Alan J Thomas, Ian G McKeith, Johannes Attems. Brain Pathol 2017
95
16

Zinc coordination spheres in protein structures.
Mikko Laitaoja, Jarkko Valjakka, Janne Jänis. Inorg Chem 2013
110
16

[Proteinopathies--forms of neurodegenerative disorders with protein aggregation-based pathology].
T A Shelkovnikova, A A Kulikova, F O Tsvetkov, O Peters, S O Bachurin, V L Bukhman, N N Ninkina. Mol Biol (Mosk) 2012
12
16

Zinc transporters and the cellular trafficking of zinc.
David J Eide. Biochim Biophys Acta 2006
512
16

Zinc ions promote Alzheimer Abeta aggregation via population shift of polymorphic states.
Yifat Miller, Buyong Ma, Ruth Nussinov. Proc Natl Acad Sci U S A 2010
183
16


The Emerging Role of the RNA-Binding Protein SFPQ in Neuronal Function and Neurodegeneration.
Yee Wa Lim, Dylan James, Jie Huang, Mihwa Lee. Int J Mol Sci 2020
7
16

Functional Status of Neuronal Calcium Sensor-1 Is Modulated by Zinc Binding.
Philipp O Tsvetkov, Andrei Yu Roman, Viktoriia E Baksheeva, Aliya A Nazipova, Marina P Shevelyova, Vasiliy I Vladimirov, Michelle F Buyanova, Dmitry V Zinchenko, Andrey A Zamyatnin, François Devred,[...]. Front Mol Neurosci 2018
12
16

Nucleic acid-binding specificity of human FUS protein.
Xueyin Wang, Jacob C Schwartz, Thomas R Cech. Nucleic Acids Res 2015
65
16

Parametrization and Benchmark of DFTB3 for Organic Molecules.
Michael Gaus, Albrecht Goez, Marcus Elstner. J Chem Theory Comput 2013
375
16

Effect of zinc binding on β-amyloid structure and dynamics: implications for Aβ aggregation.
Nasrollah Rezaei-Ghaleh, Karin Giller, Stefan Becker, Markus Zweckstetter. Biophys J 2011
58
16

Structural basis of the zinc-induced cytoplasmic aggregation of the RNA-binding protein SFPQ.
Jie Huang, Mitchell Ringuet, Andrew E Whitten, Sofia Caria, Yee Wa Lim, Rahul Badhan, Victor Anggono, Mihwa Lee. Nucleic Acids Res 2020
4
25

Zn(2+)-mediated structure formation and compaction of the "natively unfolded" human prothymosin alpha.
V N Uversky, J R Gillespie, I S Millett, A V Khodyakova, R N Vasilenko, A M Vasiliev, I L Rodionov, G D Kozlovskaya, D A Dolgikh, A L Fink,[...]. Biochem Biophys Res Commun 2000
49
16

TDP-43 functions and pathogenic mechanisms implicated in TDP-43 proteinopathies.
Todd J Cohen, Virginia M Y Lee, John Q Trojanowski. Trends Mol Med 2011
123
16

Characterization of biometal profiles in neurological disorders.
Stefanie Pfaender, Andreas M Grabrucker. Metallomics 2014
56
16

The Microbiome and Human Biology.
Rob Knight, Chris Callewaert, Clarisse Marotz, Embriette R Hyde, Justine W Debelius, Daniel McDonald, Mitchell L Sogin. Annu Rev Genomics Hum Genet 2017
134
16

Correlation of Peripheral Immunity With Rapid Amyotrophic Lateral Sclerosis Progression.
Benjamin J Murdock, Tingting Zhou, Samy R Kashlan, Roderick J Little, Stephen A Goutman, Eva L Feldman. JAMA Neurol 2017
64
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.