A citation-based method for searching scientific literature


List of co-cited articles
9 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Identifying transposable element expression dynamics and heterogeneity during development at the single-cell level with a processing pipeline scTE.
Jiangping He, Isaac A Babarinde, Li Sun, Shuyang Xu, Ruhai Chen, Junjie Shi, Yuanjie Wei, Yuhao Li, Gang Ma, Qiang Zhuang,[...]. Nat Commun 2021
3
66

Transposable elements have rewired the core regulatory network of human embryonic stem cells.
Galih Kunarso, Na-Yu Chia, Justin Jeyakani, Catalina Hwang, Xinyi Lu, Yun-Shen Chan, Huck-Hui Ng, Guillaume Bourque. Nat Genet 2010
456
66

Molecular Criteria for Defining the Naive Human Pluripotent State.
Thorold W Theunissen, Marc Friedli, Yupeng He, Evarist Planet, Ryan C O'Neil, Styliani Markoulaki, Julien Pontis, Haoyi Wang, Alexandra Iouranova, Michaël Imbeault,[...]. Cell Stem Cell 2016
228
66

Ten things you should know about transposable elements.
Guillaume Bourque, Kathleen H Burns, Mary Gehring, Vera Gorbunova, Andrei Seluanov, Molly Hammell, Michaël Imbeault, Zsuzsanna Izsvák, Henry L Levin, Todd S Macfarlan,[...]. Genome Biol 2018
193
66

Dynamic transcription of distinct classes of endogenous retroviral elements marks specific populations of early human embryonic cells.
Jonathan Göke, Xinyi Lu, Yun-Shen Chan, Huck-Hui Ng, Lam-Ha Ly, Friedrich Sachs, Iwona Szczerbinska. Cell Stem Cell 2015
141
66

A LINE1-Nucleolin Partnership Regulates Early Development and ESC Identity.
Michelle Percharde, Chih-Jen Lin, Yafei Yin, Juan Guan, Gabriel A Peixoto, Aydan Bulut-Karslioglu, Steffen Biechele, Bo Huang, Xiaohua Shen, Miguel Ramalho-Santos. Cell 2018
144
66

Transposable elements are regulated by context-specific patterns of chromatin marks in mouse embryonic stem cells.
Jiangping He, Xiuling Fu, Meng Zhang, Fangfang He, Wenjuan Li, Mazid Md Abdul, Jianguo Zhou, Li Sun, Chen Chang, Yuhao Li,[...]. Nat Commun 2019
31
66

Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance.
Alexandre Fort, Kosuke Hashimoto, Daisuke Yamada, Md Salimullah, Chaman A Keya, Alka Saxena, Alessandro Bonetti, Irina Voineagu, Nicolas Bertin, Anton Kratz,[...]. Nat Genet 2014
171
66

Embryonic stem cell potency fluctuates with endogenous retrovirus activity.
Todd S Macfarlan, Wesley D Gifford, Shawn Driscoll, Karen Lettieri, Helen M Rowe, Dario Bonanomi, Amy Firth, Oded Singer, Didier Trono, Samuel L Pfaff. Nature 2012
524
66

Functions of noncoding sequences in mammalian genomes.
L I Patrushev, T F Kovalenko. Biochemistry (Mosc) 2014
34
33


Genome-Wide Association Study for Susceptibility to and Recoverability From Mastitis in Danish Holstein Cows.
B G Welderufael, Peter Løvendahl, Dirk-Jan de Koning, Lucas L G Janss, W F Fikse. Front Genet 2018
9
33

Absence of mutations in the deoxycytidine kinase (dCK) gene in patients with relapsed and/or refractory acute myeloid leukemia (AML).
M M van den Heuvel-Eibrink, E A Wiemer, M Kuijpers, R Pieters, P Sonneveld. Leukemia 2001
24
33



Genetic improvement of mastitis through selection on somatic cell count.
G E Shook. Vet Clin North Am Food Anim Pract 1993
72
33


A novel generalized ridge regression method for quantitative genetics.
Xia Shen, Moudud Alam, Freddy Fikse, Lars Rönnegård. Genetics 2013
36
33

Effect of Single Nucleotide Polymorphisms of Toll-Like Receptor 4 (TLR 4) on Reproductive Performance and Immune Function in Dairy Cows.
Takashi Shimizu, Yurie Kawasaki, Yuka Aoki, Fumie Magata, Chiho Kawashima, Akio Miyamoto. Biochem Genet 2017
4
33

Three Novel Players: PTK2B, SYK, and TNFRSF21 Were Identified to Be Involved in the Regulation of Bovine Mastitis Susceptibility via GWAS and Post-transcriptional Analysis.
Fan Yang, Fanghui Chen, Lili Li, Li Yan, Tarig Badri, Chenglong Lv, Daolun Yu, Manling Zhang, Xiaojun Jang, Jie Li,[...]. Front Immunol 2019
6
33

RNA-Dependent Epigenetic Silencing Directs Transcriptional Downregulation Caused by Intronic Repeat Expansions.
Hannes Eimer, Sridevi Sureshkumar, Avilash Singh Yadav, Calvin Kraupner-Taylor, Champa Bandaranayake, Andrei Seleznev, Tamblyn Thomason, Stephen J Fletcher, Stephanie Frances Gordon, Bernard J Carroll,[...]. Cell 2018
11
33

miRNA-185 regulates the VEGFA signaling pathway in dairy cows with retained fetal membranes.
C Y Zheng, X Zou, H J Lin, B C Zhao, M L Zhang, C H Luo, S X Fu. Theriogenology 2018
3
33

Association analysis for udder health based on SNP-panel and sequence data in Danish Holsteins.
Xiaoping Wu, Mogens S Lund, Goutam Sahana, Bernt Guldbrandtsen, Dongxiao Sun, Qin Zhang, Guosheng Su. Genet Sel Evol 2015
24
33

Selenium alters miRNA profile in an intestinal cell line: evidence that miR-185 regulates expression of GPX2 and SEPSH2.
Anabel Maciel-Dominguez, Daniel Swan, Dianne Ford, John Hesketh. Mol Nutr Food Res 2013
39
33

Safety and efficacy of a mesenchymal stem cell intramammary therapy in dairy cows with experimentally induced Staphylococcus aureus clinical mastitis.
O A Peralta, C Carrasco, C Vieytes, M J Tamayo, I Muñoz, S Sepulveda, T Tadich, M Duchens, P Melendez, A Mella,[...]. Sci Rep 2020
6
33

The relationship between the variants of the bovine MBL2 gene and milk production traits, mastitis, serum MBL-C levels and complement activity.
Xinju Wang, Zhihua Ju, Jinming Huang, Minghai Hou, Lei Zhou, Chao Qi, Yan Zhang, Qing Gao, Qing Pan, Guorong Li,[...]. Vet Immunol Immunopathol 2012
19
33


Genetic Selection for Mastitis Resistance.
Kent A Weigel, George E Shook. Vet Clin North Am Food Anim Pract 2018
14
33



Methylation analysis of CXCR1 in mammary gland tissue of cows with mastitis induced by Staphylococcus aureus.
Y J Mao, X R Zhu, R Li, D Chen, S Y Xin, Y H Zhu, X X Liao, X L Wang, H M Zhang, Z P Yang,[...]. Genet Mol Res 2015
3
33

Alternative somatic cell count traits to improve mastitis resistance in Canadian Holsteins.
A Koeck, F Miglior, D F Kelton, F S Schenkel. J Dairy Sci 2012
33
33

miRBase: tools for microRNA genomics.
Sam Griffiths-Jones, Harpreet Kaur Saini, Stijn van Dongen, Anton J Enright. Nucleic Acids Res 2008
33

Health and production traits in bovine are associated with single nucleotide polymorphisms in the NOD2 gene.
W Wang, L Cheng, J Yi, J Gan, H Tang, M Z Fu, H Wang, S J Lai. Genet Mol Res 2015
3
33

6
33

GenABEL: an R library for genome-wide association analysis.
Yurii S Aulchenko, Stephan Ripke, Aaron Isaacs, Cornelia M van Duijn. Bioinformatics 2007
33

Identification and characterization of a new interleukin-8 receptor in bovine species.
Hichem Lahouassa, Pascal Rainard, Alain Caraty, Céline Riollet. Mol Immunol 2008
18
33


Whole-genome expression analysis of mammalian-wide interspersed repeat elements in human cell lines.
Davide Carnevali, Anastasia Conti, Matteo Pellegrini, Giorgio Dieci. DNA Res 2017
10
33

Identification of an antiangiogenic FGF2-binding site in the N terminus of the soluble pattern recognition receptor PTX3.
Maura Camozzi, Marco Rusnati, Antonella Bugatti, Barbara Bottazzi, Alberto Mantovani, Antonio Bastone, Antonio Inforzato, Silvia Vincenti, Luisa Bracci, Domenico Mastroianni,[...]. J Biol Chem 2006
87
33

The human genome browser at UCSC.
W James Kent, Charles W Sugnet, Terrence S Furey, Krishna M Roskin, Tom H Pringle, Alan M Zahler, David Haussler. Genome Res 2002
33

Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection.
Evgeny A Glazov, Kritaya Kongsuwan, Wanchai Assavalapsakul, Paul F Horwood, Neena Mitter, Timothy J Mahony. PLoS One 2009
69
33

Genome-wide association study in Chinese Holstein cows reveal two candidate genes for somatic cell score as an indicator for mastitis susceptibility.
Xiao Wang, Peipei Ma, Jianfeng Liu, Qin Zhang, Yuan Zhang, Xiangdong Ding, Li Jiang, Yachun Wang, Yi Zhang, Dongxiao Sun,[...]. BMC Genet 2015
29
33



Structure, clustering and functional insights of repeats configurations in the upstream promoter region of the human coding genes.
Fabian Tobar-Tosse, Patricia E Veléz, Eliana Ocampo-Toro, Pedro A Moreno. BMC Genomics 2018
4
33

Genetic variation in CXCR1 haplotypes linked to severity of Streptococcus uberis infection in an experimental challenge model.
Lydia Siebert, Susan Headrick, Mark Lewis, Barbara Gillespie, Charlie Young, Leszek Wojakiewicz, Oudessa Kerro-Dego, Maria E Prado, Raul Almeida, Stephen P Oliver,[...]. Vet Immunol Immunopathol 2017
4
33

RNAcentral: a comprehensive database of non-coding RNA sequences.
Anton I Petrov, Simon J E Kay, Ioanna Kalvari, Kevin L Howe, Kristian A Gray, Elspeth A Bruford, Paul J Kersey, Guy Cochrane, Robert D Finn, Alex Bateman,[...]. Nucleic Acids Res 2017
88
33

Bovine mastitis and optimal disease management: Dynamic programming analysis.
Tokuharu Sekiya, Sachi Yamaguchi, Yoh Iwasa. J Theor Biol 2020
1
100

Proinflammatory cytokines.
C A Dinarello. Chest 2000
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.