A citation-based method for searching scientific literature

Lucie Poggi, Guy-Franck Richard. Microbiol Mol Biol Rev 2020
Times Cited: 10







List of co-cited articles
67 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


In-Depth Bioinformatic Analyses of Nidovirales Including Human SARS-CoV-2, SARS-CoV, MERS-CoV Viruses Suggest Important Roles of Non-canonical Nucleic Acid Structures in Their Lifecycles.
Martin Bartas, Václav Brázda, Natália Bohálová, Alessio Cantara, Adriana Volná, Tereza Stachurová, Kateřina Malachová, Eva B Jagelská, Otília Porubiaková, Jiří Červeň,[...]. Front Microbiol 2020
31
40

The Structure and Function of DNA G-Quadruplexes.
Jochen Spiegel, Santosh Adhikari, Shankar Balasubramanian. Trends Chem 2020
204
40

G-Quadruplexes in the Archaea Domain.
Václav Brázda, Yu Luo, Martin Bartas, Patrik Kaura, Otilia Porubiaková, Jiří Šťastný, Petr Pečinka, Daniela Verga, Violette Da Cunha, Tomio S Takahashi,[...]. Biomolecules 2020
17
30

Cruciform structures are a common DNA feature important for regulating biological processes.
Václav Brázda, Rob C Laister, Eva B Jagelská, Cheryl Arrowsmith. BMC Mol Biol 2011
146
30

Structures and stability of simple DNA repeats from bacteria.
Vaclav Brazda, Miroslav Fojta, Richard P Bowater. Biochem J 2020
13
30

On the wrong DNA track: Molecular mechanisms of repeat-mediated genome instability.
Alexandra N Khristich, Sergei M Mirkin. J Biol Chem 2020
66
30

Repeat instability: mechanisms of dynamic mutations.
Christopher E Pearson, Kerrie Nichol Edamura, John D Cleary. Nat Rev Genet 2005
621
30

Whole genome experimental maps of DNA G-quadruplexes in multiple species.
Giovanni Marsico, Vicki S Chambers, Aleksandr B Sahakyan, Patrick McCauley, Jonathan M Boutell, Marco Di Antonio, Shankar Balasubramanian. Nucleic Acids Res 2019
130
30

RNA Helicase DDX1 Converts RNA G-Quadruplex Structures into R-Loops to Promote IgH Class Switch Recombination.
Claudia Ribeiro de Almeida, Somdutta Dhir, Ashish Dhir, Amin E Moghaddam, Quentin Sattentau, Anton Meinhart, Nicholas J Proudfoot. Mol Cell 2018
81
20


G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
761
20

p73, like its p53 homolog, shows preference for inverted repeats forming cruciforms.
Jana Čechová, Jan Coufal, Eva B Jagelská, Miroslav Fojta, Václav Brázda. PLoS One 2018
9
22

Cruciform DNA Sequences in Gene Promoters Can Impact Transcription upon Oxidative Modification of 2'-Deoxyguanosine.
Aaron M Fleming, Judy Zhu, Manuel Jara-Espejo, Cynthia J Burrows. Biochemistry 2020
6
33

Preferential binding of IFI16 protein to cruciform structure and superhelical DNA.
Václav Brázda, Jan Coufal, Jack C C Liao, Cheryl H Arrowsmith. Biochem Biophys Res Commun 2012
50
20

p53 Binds Preferentially to Non-B DNA Structures Formed by the Pyrimidine-Rich Strands of GAA·TTC Trinucleotide Repeats Associated with Friedreich's Ataxia.
Robert Helma, Pavla Bažantová, Marek Petr, Matej Adámik, Daniel Renčiuk, Vlastimil Tichý, Alena Pastuchová, Zuzana Soldánová, Petr Pečinka, Richard P Bowater,[...]. Molecules 2019
4
50

I-motif DNA structures are formed in the nuclei of human cells.
Mahdi Zeraati, David B Langley, Peter Schofield, Aaron L Moye, Romain Rouet, William E Hughes, Tracy M Bryan, Marcel E Dinger, Daniel Christ. Nat Chem 2018
233
20

IFI16 Preferentially Binds to DNA with Quadruplex Structure and Enhances DNA Quadruplex Formation.
Lucia Hároníková, Jan Coufal, Iva Kejnovská, Eva B Jagelská, Miroslav Fojta, Petra Dvořáková, Petr Muller, Borivoj Vojtesek, Václav Brázda. PLoS One 2016
19
20


Structure-forming repeats and their impact on genome stability.
Rebecca E Brown, Catherine H Freudenreich. Curr Opin Genet Dev 2021
7
28

Isolated short CTG/CAG DNA slip-outs are repaired efficiently by hMutSbeta, but clustered slip-outs are poorly repaired.
Gagan B Panigrahi, Meghan M Slean, Jodie P Simard, Opher Gileadi, Christopher E Pearson. Proc Natl Acad Sci U S A 2010
66
20

Tissue- and age-specific DNA replication patterns at the CTG/CAG-expanded human myotonic dystrophy type 1 locus.
John D Cleary, Stéphanie Tomé, Arturo López Castel, Gagan B Panigrahi, Laurent Foiry, Katharine A Hagerman, Hana Sroka, David Chitayat, Geneviève Gourdon, Christopher E Pearson. Nat Struct Mol Biol 2010
55
20

Human MutLγ, the MLH1-MLH3 heterodimer, is an endonuclease that promotes DNA expansion.
Lyudmila Y Kadyrova, Vaibhavi Gujar, Vickers Burdett, Paul L Modrich, Farid A Kadyrov. Proc Natl Acad Sci U S A 2020
26
20

Disease-associated repeat instability and mismatch repair.
Monika H M Schmidt, Christopher E Pearson. DNA Repair (Amst) 2016
123
20

Zinc-finger directed double-strand breaks within CAG repeat tracts promote repeat instability in human cells.
David Mittelman, Christopher Moye, Jason Morton, Kristen Sykoudis, Yunfu Lin, Dana Carroll, John H Wilson. Proc Natl Acad Sci U S A 2009
68
20

Modifiers of CAG/CTG Repeat Instability: Insights from Mammalian Models.
Vanessa C Wheeler, Vincent Dion. J Huntingtons Dis 2021
19
20

Extrahelical (CAG)/(CTG) triplet repeat elements support proliferating cell nuclear antigen loading and MutLα endonuclease activation.
Anna Pluciennik, Vickers Burdett, Celia Baitinger, Ravi R Iyer, Kevin Shi, Paul Modrich. Proc Natl Acad Sci U S A 2013
51
20

Rad51-mediated replication fork reversal is a global response to genotoxic treatments in human cells.
Ralph Zellweger, Damian Dalcher, Karun Mutreja, Matteo Berti, Jonas A Schmid, Raquel Herrador, Alessandro Vindigni, Massimo Lopes. J Cell Biol 2015
375
20

MSH2 ATPase domain mutation affects CTG*CAG repeat instability in transgenic mice.
Stéphanie Tomé, Ian Holt, Winfried Edelmann, Glenn E Morris, Arnold Munnich, Christopher E Pearson, Geneviève Gourdon. PLoS Genet 2009
66
20



Pms2 is a genetic enhancer of trinucleotide CAG.CTG repeat somatic mosaicism: implications for the mechanism of triplet repeat expansion.
Mário Gomes-Pereira, M Teresa Fortune, Laura Ingram, John P McAbney, Darren G Monckton. Hum Mol Genet 2004
132
20



Unstable DNA may be responsible for the incomplete penetrance of the myotonic dystrophy phenotype.
P Shelbourne, R Winqvist, E Kunert, J Davies, J Leisti, H Thiele, H Bachmann, J Buxton, B Williamson, K Johnson. Hum Mol Genet 1992
117
20

Trinucleotide repeats that expand in human disease form hairpin structures in vitro.
A M Gacy, G Goellner, N Juranić, S Macura, C T McMurray. Cell 1995
475
20

Initial sequencing and analysis of the human genome.
E S Lander, L M Linton, B Birren, C Nusbaum, M C Zody, J Baldwin, K Devon, K Dewar, M Doyle, W FitzHugh,[...]. Nature 2001
20

Replication stalling and heteroduplex formation within CAG/CTG trinucleotide repeats by mismatch repair.
David Viterbo, Grégoire Michoud, Valentine Mosbach, Bernard Dujon, Guy-Franck Richard. DNA Repair (Amst) 2016
28
20

Repeat instability during DNA repair: Insights from model systems.
Karen Usdin, Nealia C M House, Catherine H Freudenreich. Crit Rev Biochem Mol Biol 2015
107
20

Reduction in size of the myotonic dystrophy trinucleotide repeat mutation during transmission.
K L O'Hoy, C Tsilfidis, M S Mahadevan, C E Neville, J Barceló, A G Hunter, R G Korneluk. Science 1993
122
20




Comparative genomics and molecular dynamics of DNA repeats in eukaryotes.
Guy-Franck Richard, Alix Kerrest, Bernard Dujon. Microbiol Mol Biol Rev 2008
283
20


Trinucleotide repeats in human genome and exome.
Piotr Kozlowski, Mateusz de Mezer, Wlodzimierz J Krzyzosiak. Nucleic Acids Res 2010
89
20

Thermodynamically stable and genetically unstable G-quadruplexes are depleted in genomes across species.
Emilia Puig Lombardi, Allyson Holmes, Daniela Verga, Marie-Paule Teulade-Fichou, Alain Nicolas, Arturo Londoño-Vallejo. Nucleic Acids Res 2019
37
20

Thioflavin T as a fluorescence light-up probe for G4 formation.
Amandine Renaud de la Faverie, Aurore Guédin, Amina Bedrat, Liliya A Yatsunyk, Jean-Louis Mergny. Nucleic Acids Res 2014
180
20

Analyses of viral genomes for G-quadruplex forming sequences reveal their correlation with the type of infection.
Natália Bohálová, Alessio Cantara, Martin Bartas, Patrik Kaura, Jiří Šťastný, Petr Pečinka, Miroslav Fojta, Jean-Louis Mergny, Václav Brázda. Biochimie 2021
14
20

Viral G-quadruplexes: New frontiers in virus pathogenesis and antiviral therapy.
Emanuela Ruggiero, Sara N Richter. Annu Rep Med Chem 2020
40
20

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.