A citation-based method for searching scientific literature

Matthias Jürgen Schmitt, Carlos Company, Yuliia Dramaretska, Iros Barozzi, Andreas Göhrig, Sonia Kertalli, Melanie Großmann, Heike Naumann, Maria Pilar Sanchez-Bailon, Danielle Hulsman, Rainer Glass, Massimo Squatrito, Michela Serresi, Gaetano Gargiulo. Cancer Discov 2021
Times Cited: 4







List of co-cited articles
14 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


An Integrative Model of Cellular States, Plasticity, and Genetics for Glioblastoma.
Cyril Neftel, Julie Laffy, Mariella G Filbin, Toshiro Hara, Marni E Shore, Gilbert J Rahme, Alyssa R Richman, Dana Silverbush, McKenzie L Shaw, Christine M Hebert,[...]. Cell 2019
399
75

Tumor Evolution of Glioma-Intrinsic Gene Expression Subtypes Associates with Immunological Changes in the Microenvironment.
Qianghu Wang, Baoli Hu, Xin Hu, Hoon Kim, Massimo Squatrito, Lisa Scarpace, Ana C deCarvalho, Sali Lyu, Pengping Li, Yan Li,[...]. Cancer Cell 2017
566
75

AP-1: a double-edged sword in tumorigenesis.
Robert Eferl, Erwin F Wagner. Nat Rev Cancer 2003
50

Protein kinase C α is a central signaling node and therapeutic target for breast cancer stem cells.
Wai Leong Tam, Haihui Lu, Joyce Buikhuisen, Boon Seng Soh, Elgene Lim, Ferenc Reinhardt, Zhenhua Jeremy Wu, Jordan A Krall, Brian Bierie, Wenjun Guo,[...]. Cancer Cell 2013
215
50

In vivo RNAi screen for BMI1 targets identifies TGF-β/BMP-ER stress pathways as key regulators of neural- and malignant glioma-stem cell homeostasis.
Gaetano Gargiulo, Matteo Cesaroni, Michela Serresi, Nienke de Vries, Danielle Hulsman, Sophia W Bruggeman, Cesare Lancini, Maarten van Lohuizen. Cancer Cell 2013
130
50

The epigenetics of epithelial-mesenchymal plasticity in cancer.
Wai Leong Tam, Robert A Weinberg. Nat Med 2013
766
50

Single-Cell Mapping of Human Brain Cancer Reveals Tumor-Specific Instruction of Tissue-Invading Leukocytes.
Ekaterina Friebel, Konstantina Kapolou, Susanne Unger, Nicolás Gonzalo Núñez, Sebastian Utz, Elisabeth Jane Rushing, Luca Regli, Michael Weller, Melanie Greter, Sonia Tugues,[...]. Cell 2020
108
50

Interrogation of the Microenvironmental Landscape in Brain Tumors Reveals Disease-Specific Alterations of Immune Cells.
Florian Klemm, Roeltje R Maas, Robert L Bowman, Mara Kornete, Klara Soukup, Sina Nassiri, Jean-Philippe Brouland, Christine A Iacobuzio-Donahue, Cameron Brennan, Viviane Tabar,[...]. Cell 2020
137
50

Single-cell profiling of myeloid cells in glioblastoma across species and disease stage reveals macrophage competition and specialization.
Ana Rita Pombo Antunes, Isabelle Scheyltjens, Francesca Lodi, Julie Messiaen, Asier Antoranz, Johnny Duerinck, Daliya Kancheva, Liesbet Martens, Karen De Vlaminck, Hannah Van Hove,[...]. Nat Neurosci 2021
32
50

Glioblastomas acquire myeloid-affiliated transcriptional programs via epigenetic immunoediting to elicit immune evasion.
Ester Gangoso, Benjamin Southgate, Leanne Bradley, Stefanie Rus, Felipe Galvez-Cancino, Niamh McGivern, Esra Güç, Chantriolnt-Andreas Kapourani, Adam Byron, Kirsty M Ferguson,[...]. Cell 2021
17
50

The 2016 World Health Organization Classification of Tumors of the Central Nervous System: a summary.
David N Louis, Arie Perry, Guido Reifenberger, Andreas von Deimling, Dominique Figarella-Branger, Webster K Cavenee, Hiroko Ohgaki, Otmar D Wiestler, Paul Kleihues, David W Ellison. Acta Neuropathol 2016
50

Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1.
Roel G W Verhaak, Katherine A Hoadley, Elizabeth Purdom, Victoria Wang, Yuan Qi, Matthew D Wilkerson, C Ryan Miller, Li Ding, Todd Golub, Jill P Mesirov,[...]. Cancer Cell 2010
50

Clonal evolution of glioblastoma under therapy.
Jiguang Wang, Emanuela Cazzato, Erik Ladewig, Veronique Frattini, Daniel I S Rosenbloom, Sakellarios Zairis, Francesco Abate, Zhaoqi Liu, Oliver Elliott, Yong-Jae Shin,[...]. Nat Genet 2016
336
50

Interactions between cancer cells and immune cells drive transitions to mesenchymal-like states in glioblastoma.
Toshiro Hara, Rony Chanoch-Myers, Nathan D Mathewson, Chad Myskiw, Lyla Atta, Lillian Bussema, Stephen W Eichhorn, Alissa C Greenwald, Gabriela S Kinker, Christopher Rodman,[...]. Cancer Cell 2021
19
50

The Tumor Suppressor ARID1A Controls Global Transcription via Pausing of RNA Polymerase II.
Marco Trizzino, Elisa Barbieri, Ana Petracovici, Shuai Wu, Sarah A Welsh, Tori A Owens, Silvia Licciulli, Rugang Zhang, Alessandro Gardini. Cell Rep 2018
30
25

Poised chromatin at the ZEB1 promoter enables breast cancer cell plasticity and enhances tumorigenicity.
Christine L Chaffer, Nemanja D Marjanovic, Tony Lee, George Bell, Celina G Kleer, Ferenc Reinhardt, Ana C D'Alessio, Richard A Young, Robert A Weinberg. Cell 2013
537
25

Synthetic vulnerabilities of mesenchymal subpopulations in pancreatic cancer.
Giannicola Genovese, Alessandro Carugo, James Tepper, Frederick Scott Robinson, Liren Li, Maria Svelto, Luigi Nezi, Denise Corti, Rosalba Minelli, Piergiorgio Pettazzoni,[...]. Nature 2017
59
25

TGF-β orchestrates fibrogenic and developmental EMTs via the RAS effector RREB1.
Jie Su, Sophie M Morgani, Charles J David, Qiong Wang, Ekrem Emrah Er, Yun-Han Huang, Harihar Basnet, Yilong Zou, Weiping Shu, Rajesh K Soni,[...]. Nature 2020
85
25

Ezh2 inhibition in Kras-driven lung cancer amplifies inflammation and associated vulnerabilities.
Michela Serresi, Bjorn Siteur, Danielle Hulsman, Carlos Company, Matthias J Schmitt, Cor Lieftink, Ben Morris, Matteo Cesaroni, Natalie Proost, Roderick L Beijersbergen,[...]. J Exp Med 2018
15
25



A bivalent chromatin structure marks key developmental genes in embryonic stem cells.
Bradley E Bernstein, Tarjei S Mikkelsen, Xiaohui Xie, Michael Kamal, Dana J Huebert, James Cuff, Ben Fry, Alex Meissner, Marius Wernig, Kathrin Plath,[...]. Cell 2006
25

Polycomb Repressive Complex 2 Is a Barrier to KRAS-Driven Inflammation and Epithelial-Mesenchymal Transition in Non-Small-Cell Lung Cancer.
Michela Serresi, Gaetano Gargiulo, Natalie Proost, Bjorn Siteur, Matteo Cesaroni, Martijn Koppens, Huafeng Xie, Kate D Sutherland, Danielle Hulsman, Elisabetta Citterio,[...]. Cancer Cell 2016
67
25

Functions of BET proteins in erythroid gene expression.
Aaron J Stonestrom, Sarah C Hsu, Kristen S Jahn, Peng Huang, Cheryl A Keller, Belinda M Giardine, Stephan Kadauke, Amy E Campbell, Perry Evans, Ross C Hardison,[...]. Blood 2015
58
25

Genomic analysis of diffuse intrinsic pontine gliomas identifies three molecular subgroups and recurrent activating ACVR1 mutations.
Pawel Buczkowicz, Christine Hoeman, Patricia Rakopoulos, Sanja Pajovic, Louis Letourneau, Misko Dzamba, Andrew Morrison, Peter Lewis, Eric Bouffet, Ute Bartels,[...]. Nat Genet 2014
350
25

A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing.
Joyce E Ohm, Kelly M McGarvey, Xiaobing Yu, Linzhao Cheng, Kornel E Schuebel, Leslie Cope, Helai P Mohammad, Wei Chen, Vincent C Daniel, Wayne Yu,[...]. Nat Genet 2007
771
25

Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy.
Cigall Kadoch, Diana C Hargreaves, Courtney Hodges, Laura Elias, Lena Ho, Jeff Ranish, Gerald R Crabtree. Nat Genet 2013
692
25

Defining a Cancer Dependency Map.
Aviad Tsherniak, Francisca Vazquez, Phil G Montgomery, Barbara A Weir, Gregory Kryukov, Glenn S Cowley, Stanley Gill, William F Harrington, Sasha Pantel, John M Krill-Burger,[...]. Cell 2017
663
25

Project DRIVE: A Compendium of Cancer Dependencies and Synthetic Lethal Relationships Uncovered by Large-Scale, Deep RNAi Screening.
E Robert McDonald, Antoine de Weck, Michael R Schlabach, Eric Billy, Konstantinos J Mavrakis, Gregory R Hoffman, Dhiren Belur, Deborah Castelletti, Elizabeth Frias, Kalyani Gampa,[...]. Cell 2017
279
25

Regulation of EMT by TGFβ in cancer.
Carl-Henrik Heldin, Michael Vanlandewijck, Aristidis Moustakas. FEBS Lett 2012
343
25

In vivo shRNA screens in solid tumors.
Gaetano Gargiulo, Michela Serresi, Matteo Cesaroni, Danielle Hulsman, Maarten van Lohuizen. Nat Protoc 2014
27
25

KRAS and YAP1 converge to regulate EMT and tumor survival.
Diane D Shao, Wen Xue, Elsa B Krall, Arjun Bhutkar, Federica Piccioni, Xiaoxing Wang, Anna C Schinzel, Sabina Sood, Joseph Rosenbluh, Jong W Kim,[...]. Cell 2014
457
25

Uncoupling histone H3K4 trimethylation from developmental gene expression via an equilibrium of COMPASS, Polycomb and DNA methylation.
Delphine Douillet, Christie C Sze, Caila Ryan, Andrea Piunti, Avani P Shah, Michal Ugarenko, Stacy A Marshall, Emily J Rendleman, Didi Zha, Kathryn A Helmin,[...]. Nat Genet 2020
28
25

Epithelial-to-mesenchymal transition is dispensable for metastasis but induces chemoresistance in pancreatic cancer.
Xiaofeng Zheng, Julienne L Carstens, Jiha Kim, Matthew Scheible, Judith Kaye, Hikaru Sugimoto, Chia-Chin Wu, Valerie S LeBleu, Raghu Kalluri. Nature 2015
25

The RNA Pol II elongation factor Ell3 marks enhancers in ES cells and primes future gene activation.
Chengqi Lin, Alexander S Garruss, Zhuojuan Luo, Fengli Guo, Ali Shilatifard. Cell 2013
68
25

c-Myc regulates transcriptional pause release.
Peter B Rahl, Charles Y Lin, Amy C Seila, Ryan A Flynn, Scott McCuine, Christopher B Burge, Phillip A Sharp, Richard A Young. Cell 2010
881
25

Phf19 links methylated Lys36 of histone H3 to regulation of Polycomb activity.
Cecilia Ballaré, Martin Lange, Audrone Lapinaite, Gloria Mas Martin, Lluis Morey, Gloria Pascual, Robert Liefke, Bernd Simon, Yang Shi, Or Gozani,[...]. Nat Struct Mol Biol 2012
148
25

Activin upregulation by NF-κB is required to maintain mesenchymal features of cancer stem-like cells in non-small cell lung cancer.
J Jacob Wamsley, Manish Kumar, David F Allison, Sheena H Clift, Caitlyn M Holzknecht, Szymon J Szymura, Stephen A Hoang, Xiaojiang Xu, Christopher A Moskaluk, David R Jones,[...]. Cancer Res 2015
47
25

EMT in cancer.
Thomas Brabletz, Raghu Kalluri, M Angela Nieto, Robert A Weinberg. Nat Rev Cancer 2018
805
25

Sox4 is a master regulator of epithelial-mesenchymal transition by controlling Ezh2 expression and epigenetic reprogramming.
Neha Tiwari, Vijay K Tiwari, Lorenz Waldmeier, Piotr J Balwierz, Phil Arnold, Mikhail Pachkov, Nathalie Meyer-Schaller, Dirk Schübeler, Erik van Nimwegen, Gerhard Christofori. Cancer Cell 2013
303
25

The transcriptional and epigenomic foundations of ground state pluripotency.
Hendrik Marks, Tüzer Kalkan, Roberta Menafra, Sergey Denissov, Kenneth Jones, Helmut Hofemeister, Jennifer Nichols, Andrea Kranz, A Francis Stewart, Austin Smith,[...]. Cell 2012
568
25

ZMYND8 Reads the Dual Histone Mark H3K4me1-H3K14ac to Antagonize the Expression of Metastasis-Linked Genes.
Na Li, Yuanyuan Li, Jie Lv, Xiangdong Zheng, Hong Wen, Hongjie Shen, Guangjing Zhu, Tsai-Yu Chen, Shilpa S Dhar, Pu-Yeh Kan,[...]. Mol Cell 2016
69
25

Polycomb PHF19 binds H3K36me3 and recruits PRC2 and demethylase NO66 to embryonic stem cell genes during differentiation.
Gerard L Brien, Guillermo Gambero, David J O'Connell, Emilia Jerman, Siobhán A Turner, Chris M Egan, Eiseart J Dunne, Maike C Jurgens, Kieran Wynne, Lianhua Piao,[...]. Nat Struct Mol Biol 2012
151
25

The BET Protein BRD2 Cooperates with CTCF to Enforce Transcriptional and Architectural Boundaries.
Sarah C Hsu, Thomas G Gilgenast, Caroline R Bartman, Christopher R Edwards, Aaron J Stonestrom, Peng Huang, Daniel J Emerson, Perry Evans, Michael T Werner, Cheryl A Keller,[...]. Mol Cell 2017
69
25

The Chromatin Reader ZMYND8 Regulates Igh Enhancers to Promote Immunoglobulin Class Switch Recombination.
Verónica Delgado-Benito, Daniel B Rosen, Qiao Wang, Anna Gazumyan, Joy A Pai, Thiago Y Oliveira, Devakumar Sundaravinayagam, Wenzhu Zhang, Matteo Andreani, Lisa Keller,[...]. Mol Cell 2018
13
25

Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer.
Katherine A Hoadley, Christina Yau, Toshinori Hinoue, Denise M Wolf, Alexander J Lazar, Esther Drill, Ronglai Shen, Alison M Taylor, Andrew D Cherniack, Vésteinn Thorsson,[...]. Cell 2018
685
25

A pooled single-cell genetic screen identifies regulatory checkpoints in the continuum of the epithelial-to-mesenchymal transition.
José L McFaline-Figueroa, Andrew J Hill, Xiaojie Qiu, Dana Jackson, Jay Shendure, Cole Trapnell. Nat Genet 2019
47
25

TGF-β Tumor Suppression through a Lethal EMT.
Charles J David, Yun-Han Huang, Mo Chen, Jie Su, Yilong Zou, Nabeel Bardeesy, Christine A Iacobuzio-Donahue, Joan Massagué. Cell 2016
334
25

CRISPR knockout screening outperforms shRNA and CRISPRi in identifying essential genes.
Bastiaan Evers, Katarzyna Jastrzebski, Jeroen P M Heijmans, Wipawadee Grernrum, Roderick L Beijersbergen, Rene Bernards. Nat Biotechnol 2016
188
25

Systematic characterization of BAF mutations provides insights into intracomplex synthetic lethalities in human cancers.
Sandra Schick, André F Rendeiro, Kathrin Runggatscher, Anna Ringler, Bernd Boidol, Melanie Hinkel, Peter Májek, Loan Vulliard, Thomas Penz, Katja Parapatics,[...]. Nat Genet 2019
37
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.