A citation-based method for searching scientific literature

Xichan Hu, Jin-Kwang Kim, Clinton Yu, Hyun-Ik Jun, Jinqiang Liu, Banumathi Sankaran, Lan Huang, Feng Qiao. Cell Rep 2020
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A box H/ACA small nucleolar RNA-like domain at the human telomerase RNA 3' end.
J R Mitchell, J Cheng, K Collins. Mol Cell Biol 1999
383
100

Scalable web services for the PSIPRED Protein Analysis Workbench.
Daniel W A Buchan, Federico Minneci, Tim C O Nugent, Kevin Bryson, David T Jones. Nucleic Acids Res 2013
883
100

41
100


Template boundary definition in Tetrahymena telomerase.
Cary K Lai, Michael C Miller, Kathleen Collins. Genes Dev 2002
84
100

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
100

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
100


TPP1 is a homologue of ciliate TEBP-beta and interacts with POT1 to recruit telomerase.
Huawei Xin, Dan Liu, Ma Wan, Amin Safari, Hyeung Kim, Wen Sun, Matthew S O'Connor, Zhou Songyang. Nature 2007
355
100

Stepwise protein-mediated RNA folding directs assembly of telomerase ribonucleoprotein.
Michael D Stone, Mariana Mihalusova, Catherine M O'connor, Ramadevi Prathapam, Kathleen Collins, Xiaowei Zhuang. Nature 2007
139
100


Cryo-EM structure of substrate-bound human telomerase holoenzyme.
Thi Hoang Duong Nguyen, Jane Tam, Robert A Wu, Basil J Greber, Daniel Toso, Eva Nogales, Kathleen Collins. Nature 2018
87
100

Phosphorylation of TPP1 regulates cell cycle-dependent telomerase recruitment.
Yi Zhang, Liuh-Yow Chen, Xin Han, Wei Xie, Hyeung Kim, Dong Yang, Dan Liu, Zhou Songyang. Proc Natl Acad Sci U S A 2013
47
100

A novel motif in telomerase reverse transcriptase regulates telomere repeat addition rate and processivity.
Mingyi Xie, Joshua D Podlevsky, Xiaodong Qi, Christopher J Bley, Julian J-L Chen. Nucleic Acids Res 2010
47
100

The telomerase database.
Joshua D Podlevsky, Christopher J Bley, Rebecca V Omana, Xiaodong Qi, Julian J-L Chen. Nucleic Acids Res 2008
137
100

Impaired telomere maintenance in Alazami syndrome patients with LARP7 deficiency.
Brody Holohan, Wanil Kim, Tsung-Po Lai, Hirotoshi Hoshiyama, Ning Zhang, Anas M Alazami, Woodring E Wright, M Stephen Meyn, Fowzan S Alkuraya, Jerry W Shay. BMC Genomics 2016
16
100

Tetrahymena telomerase holoenzyme assembly, activation, and inhibition by domains of the p50 central hub.
Kyungah Hong, Heather Upton, Edward J Miracco, Jiansen Jiang, Z Hong Zhou, Juli Feigon, Kathleen Collins. Mol Cell Biol 2013
20
100

Stringent control of the RNA-dependent RNA polymerase translocation revealed by multiple intermediate structures.
Meihua Wang, Rui Li, Bo Shu, Xuping Jing, Han-Qing Ye, Peng Gong. Nat Commun 2020
8
100

Structural Biology of Telomerase.
Yaqiang Wang, Lukas Sušac, Juli Feigon. Cold Spring Harb Perspect Biol 2019
9
100

RNA purification by preparative polyacrylamide gel electrophoresis.
Alexey Petrov, Tinghe Wu, Elisabetta Viani Puglisi, Joseph D Puglisi. Methods Enzymol 2013
29
100

The POT1-TPP1 telomere complex is a telomerase processivity factor.
Feng Wang, Elaine R Podell, Arthur J Zaug, Yuting Yang, Paul Baciu, Thomas R Cech, Ming Lei. Nature 2007
456
100


Direct observation of nucleic acid binding dynamics by the telomerase essential N-terminal domain.
Shankar Shastry, Olga Steinberg-Neifach, Neal Lue, Michael D Stone. Nucleic Acids Res 2018
6
100

The Phyre2 web portal for protein modeling, prediction and analysis.
Lawrence A Kelley, Stefans Mezulis, Christopher M Yates, Mark N Wass, Michael J E Sternberg. Nat Protoc 2015
100

17
100


A structurally conserved human and Tetrahymena telomerase catalytic core.
Yaqiang Wang, Marcus Gallagher-Jones, Lukas Sušac, He Song, Juli Feigon. Proc Natl Acad Sci U S A 2020
3
100

The TEL patch of telomere protein TPP1 mediates telomerase recruitment and processivity.
Jayakrishnan Nandakumar, Caitlin F Bell, Ina Weidenfeld, Arthur J Zaug, Leslie A Leinwand, Thomas R Cech. Nature 2012
200
100


Combining conservation and species-specific differences to determine how human telomerase binds telomeres.
Valerie M Tesmer, Eric M Smith, Oana Danciu, Shilpa Padmanaban, Jayakrishnan Nandakumar. Proc Natl Acad Sci U S A 2019
7
100

Quantifying the local resolution of cryo-EM density maps.
Alp Kucukelbir, Fred J Sigworth, Hemant D Tagare. Nat Methods 2014
978
100

28
100


The architecture of Tetrahymena telomerase holoenzyme.
Jiansen Jiang, Edward J Miracco, Kyungah Hong, Barbara Eckert, Henry Chan, Darian D Cash, Bosun Min, Z Hong Zhou, Kathleen Collins, Juli Feigon. Nature 2013
72
100

Telomerase: an RNP enzyme synthesizes DNA.
Elizabeth H Blackburn, Kathleen Collins. Cold Spring Harb Perspect Biol 2011
188
100

UCSF ChimeraX: Meeting modern challenges in visualization and analysis.
Thomas D Goddard, Conrad C Huang, Elaine C Meng, Eric F Pettersen, Gregory S Couch, John H Morris, Thomas E Ferrin. Protein Sci 2018
910
100


Structure and folding of the Tetrahymena telomerase RNA pseudoknot.
Darian D Cash, Juli Feigon. Nucleic Acids Res 2017
16
100

The La and related RNA-binding proteins (LARPs): structures, functions, and evolving perspectives.
Richard J Maraia, Sandy Mattijssen, Isabel Cruz-Gallardo, Maria R Conte. Wiley Interdiscip Rev RNA 2017
47
100

A telomerase holoenzyme protein enhances telomerase RNA assembly with telomerase reverse transcriptase.
Ramadevi Prathapam, Keren L Witkin, Catherine M O'Connor, Kathleen Collins. Nat Struct Mol Biol 2005
44
100

Telomerase Mechanism of Telomere Synthesis.
R Alex Wu, Heather E Upton, Jacob M Vogan, Kathleen Collins. Annu Rev Biochem 2017
91
100



CTFFIND4: Fast and accurate defocus estimation from electron micrographs.
Alexis Rohou, Nikolaus Grigorieff. J Struct Biol 2015
100

Structure of the Tetrahymena thermophila telomerase RNA helix II template boundary element.
Rebecca J Richards, Carla A Theimer, L David Finger, Juli Feigon. Nucleic Acids Res 2006
23
100

Crystal structure of the essential N-terminal domain of telomerase reverse transcriptase.
Steven A Jacobs, Elaine R Podell, Thomas R Cech. Nat Struct Mol Biol 2006
125
100

Telomerase catalytic subunit homologs from fission yeast and human.
T M Nakamura, G B Morin, K B Chapman, S L Weinrich, W H Andrews, J Lingner, C B Harley, T R Cech. Science 1997
100

Observation of processive telomerase catalysis using high-resolution optical tweezers.
Eric M Patrick, Joseph D Slivka, Bramyn Payne, Matthew J Comstock, Jens C Schmidt. Nat Chem Biol 2020
11
100

COBALT: constraint-based alignment tool for multiple protein sequences.
Jason S Papadopoulos, Richa Agarwala. Bioinformatics 2007
561
100

Telomerase recognizes its template by using an adjacent RNA motif.
Michael C Miller, Kathleen Collins. Proc Natl Acad Sci U S A 2002
61
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.