A citation-based method for searching scientific literature

Shiyin Lin, Tian Meng, Haofeng Huang, Haixia Zhuang, Zhengjie He, Huan Yang, Du Feng. Theranostics 2021
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists.
Da Wei Huang, Brad T Sherman, Qina Tan, Joseph Kir, David Liu, David Bryant, Yongjian Guo, Robert Stephens, Michael W Baseler, H Clifford Lane,[...]. Nucleic Acids Res 2007
50

Global Biobank Engine: enabling genotype-phenotype browsing for biobank summary statistics.
Gregory McInnes, Yosuke Tanigawa, Chris DeBoever, Adam Lavertu, Julia Eve Olivieri, Matthew Aguirre, Manuel A Rivas. Bioinformatics 2019
31
50

Genetic effects on gene expression across human tissues.
Alexis Battle, Christopher D Brown, Barbara E Engelhardt, Stephen B Montgomery. Nature 2017
50

Loss of acinar cell IKKα triggers spontaneous pancreatitis in mice.
Ning Li, Xuefeng Wu, Ryan G Holzer, Jun-Hee Lee, Jelena Todoric, Eek-Joong Park, Hisanobu Ogata, Anna S Gukovskaya, Ilya Gukovsky, Donald P Pizzo,[...]. J Clin Invest 2013
81
50

Endogenous HMGB1 regulates autophagy.
Daolin Tang, Rui Kang, Kristen M Livesey, Chun-Wei Cheh, Adam Farkas, Patricia Loughran, George Hoppe, Marco E Bianchi, Kevin J Tracey, Herbert J Zeh,[...]. J Cell Biol 2010
613
50

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions.
Yanli Wang, Fan Song, Bo Zhang, Lijun Zhang, Jie Xu, Da Kuang, Daofeng Li, Mayank N K Choudhary, Yun Li, Ming Hu,[...]. Genome Biol 2018
190
50

HMGB1 promotes ductular reaction and tumorigenesis in autophagy-deficient livers.
Bilon Khambu, Nazmul Huda, Xiaoyun Chen, Daniel J Antoine, Yong Li, Guoli Dai, Ulrike A Köhler, Wei-Xing Zong, Satoshi Waguri, Sabine Werner,[...]. J Clin Invest 2018
47
50

HBV-HCV Coinfection: Viral Interactions, Management, and Viral Reactivation.
Marianna G Mavilia, George Y Wu. J Clin Transl Hepatol 2018
27
50

HMGB1 Promotes Hepatitis C Virus Replication by Interaction with Stem-Loop 4 in the Viral 5' Untranslated Region.
Rong Yu, Darong Yang, Shaohua Lei, Xiaohong Wang, Xianghe Meng, Binbin Xue, Haizhen Zhu. J Virol 2015
23
50

Impact of Genetic Polymorphisms on Human Immune Cell Gene Expression.
Benjamin J Schmiedel, Divya Singh, Ariel Madrigal, Alan G Valdovino-Gonzalez, Brandie M White, Jose Zapardiel-Gonzalo, Brendan Ha, Gokmen Altay, Jason A Greenbaum, Graham McVicker,[...]. Cell 2018
186
50

High-Mobility Group Box-1 and Liver Disease.
Harriet Gaskell, Xiaodong Ge, Natalia Nieto. Hepatol Commun 2018
30
50

Reference-based phasing using the Haplotype Reference Consortium panel.
Po-Ru Loh, Petr Danecek, Pier Francesco Palamara, Christian Fuchsberger, Yakir A Reshef, Hilary K Finucane, Sebastian Schoenherr, Lukas Forer, Shane McCarthy, Goncalo R Abecasis,[...]. Nat Genet 2016
492
50

Cadherin-6 promotes EMT and cancer metastasis by restraining autophagy.
M Gugnoni, V Sancisi, G Gandolfi, G Manzotti, M Ragazzi, D Giordano, I Tamagnini, M Tigano, A Frasoldati, S Piana,[...]. Oncogene 2017
109
50

Molecular mechanisms of viral hepatitis induced hepatocellular carcinoma.
Simmone D'souza, Keith Ck Lau, Carla S Coffin, Trushar R Patel. World J Gastroenterol 2020
24
50


FINEMAP: efficient variable selection using summary data from genome-wide association studies.
Christian Benner, Chris C A Spencer, Aki S Havulinna, Veikko Salomaa, Samuli Ripatti, Matti Pirinen. Bioinformatics 2016
197
50

PLINK: a tool set for whole-genome association and population-based linkage analyses.
Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, Lori Thomas, Manuel A R Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I W de Bakker, Mark J Daly,[...]. Am J Hum Genet 2007
50

Host Genetic Determinants of Hepatitis B Virus Infection.
Zhenhua Zhang, Changtai Wang, Zhongping Liu, Guizhou Zou, Jun Li, Mengji Lu. Front Genet 2019
16
50

High mobility group protein B1 controls liver cancer initiation through yes-associated protein -dependent aerobic glycolysis.
Ruochan Chen, Shan Zhu, Xue-Gong Fan, Haichao Wang, Michael T Lotze, Herbert J Zeh, Timothy R Billiar, Rui Kang, Daolin Tang. Hepatology 2018
58
50

Obesity-associated variants within FTO form long-range functional connections with IRX3.
Scott Smemo, Juan J Tena, Kyoung-Han Kim, Eric R Gamazon, Noboru J Sakabe, Carlos Gómez-Marín, Ivy Aneas, Flavia L Credidio, Débora R Sobreira, Nora F Wasserman,[...]. Nature 2014
715
50

Hepatitis C.
C Wendy Spearman, Geoffrey M Dusheiko, Margaret Hellard, Mark Sonderup. Lancet 2019
119
50

Trans-ethnic and Ancestry-Specific Blood-Cell Genetics in 746,667 Individuals from 5 Global Populations.
Ming-Huei Chen, Laura M Raffield, Abdou Mousas, Saori Sakaue, Jennifer E Huffman, Arden Moscati, Bhavi Trivedi, Tao Jiang, Parsa Akbari, Dragana Vuckovic,[...]. Cell 2020
56
50

Targeting Inflammation Driven by HMGB1.
Huan Yang, Haichao Wang, Ulf Andersson. Front Immunol 2020
76
50

FTO Obesity Variant Circuitry and Adipocyte Browning in Humans.
Melina Claussnitzer, Simon N Dankel, Kyoung-Han Kim, Gerald Quon, Wouter Meuleman, Christine Haugen, Viktoria Glunk, Isabel S Sousa, Jacqueline L Beaudry, Vijitha Puviindran,[...]. N Engl J Med 2015
672
50

ATF3 negatively regulates cellular antiviral signaling and autophagy in the absence of type I interferons.
Vikas Sood, Kiran Bala Sharma, Vishal Gupta, Dhurjhoti Saha, Parashar Dhapola, Manish Sharma, Utsav Sen, Shigetaka Kitajima, Shantanu Chowdhury, Manjula Kalia,[...]. Sci Rep 2017
16
50

HMGB1-dependent and -independent autophagy.
Xiaofang Sun, Daolin Tang. Autophagy 2014
49
50

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
50

STRING v9.1: protein-protein interaction networks, with increased coverage and integration.
Andrea Franceschini, Damian Szklarczyk, Sune Frankild, Michael Kuhn, Milan Simonovic, Alexander Roth, Jianyi Lin, Pablo Minguez, Peer Bork, Christian von Mering,[...]. Nucleic Acids Res 2013
50


METAL: fast and efficient meta-analysis of genomewide association scans.
Cristen J Willer, Yun Li, Gonçalo R Abecasis. Bioinformatics 2010
50

Functional mapping and annotation of genetic associations with FUMA.
Kyoko Watanabe, Erdogan Taskesen, Arjen van Bochoven, Danielle Posthuma. Nat Commun 2017
748
50

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists.
Da Wei Huang, Brad T Sherman, Richard A Lempicki. Nucleic Acids Res 2009
50

High-mobility group box 1 is dispensable for autophagy, mitochondrial quality control, and organ function in vivo.
Peter Huebener, Geum-Youn Gwak, Jean-Philippe Pradere, Catarina M Quinzii, Richard Friedman, Chyuan-Sheng Lin, Chad M Trent, Ingmar Mederacke, Enpeng Zhao, Dianne H Dapito,[...]. Cell Metab 2014
52
50

Cytoscape 2.8: new features for data integration and network visualization.
Michael E Smoot, Keiichiro Ono, Johannes Ruscheinski, Peng-Liang Wang, Trey Ideker. Bioinformatics 2011
50

Hepatitis B Virus-Encoded MicroRNA Controls Viral Replication.
Xi Yang, Hongfeng Li, Huahui Sun, Hongxia Fan, Yaqi Hu, Min Liu, Xin Li, Hua Tang. J Virol 2017
44
50

Amino acid-induced regulation of hepatocyte growth: possible role of Drosha.
Gaia Fabris, Olivier Dumortier, Didier F Pisani, Nadine Gautier, Emmanuel Van Obberghen. Cell Death Dis 2019
5
50

Defective Phosphatidylglycerol Remodeling Causes Hepatopathy, Linking Mitochondrial Dysfunction to Hepatosteatosis.
Xiaoyang Zhang, Jun Zhang, Haoran Sun, Xueling Liu, Yue Zheng, Dan Xu, Jianing Wang, Dandan Jia, Xianlin Han, Feng Liu,[...]. Cell Mol Gastroenterol Hepatol 2019
5
50

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.
Da Wei Huang, Brad T Sherman, Richard A Lempicki. Nat Protoc 2009
50

limma powers differential expression analyses for RNA-sequencing and microarray studies.
Matthew E Ritchie, Belinda Phipson, Di Wu, Yifang Hu, Charity W Law, Wei Shi, Gordon K Smyth. Nucleic Acids Res 2015
50

A genome-wide siRNA screen reveals multiple mTORC1 independent signaling pathways regulating autophagy under normal nutritional conditions.
Marta M Lipinski, Greg Hoffman, Aylwin Ng, Wen Zhou, Bénédicte F Py, Emily Hsu, Xuxin Liu, Jason Eisenberg, Jun Liu, John Blenis,[...]. Dev Cell 2010
168
50

HMGB1 gene polymorphisms in patients with chronic hepatitis B virus infection.
Chun-Qing Deng, Guo-Hong Deng, Yu-Ming Wang. World J Gastroenterol 2013
12
50

IL-1β/ATF3-mediated induction of Ski2 expression enhances hepatitis B virus x mRNA degradation.
Fumihiro Shiromoto, Hussein H Aly, Haruka Kudo, Koichi Watashi, Asako Murayama, Noriyuki Watanabe, Xin Zheng, Takanobu Kato, Kazuaki Chayama, Masamichi Muramatsu,[...]. Biochem Biophys Res Commun 2018
5
50

The macrophage-specific V-ATPase subunit ATP6V0D2 restricts inflammasome activation and bacterial infection by facilitating autophagosome-lysosome fusion.
Yu Xia, Na Liu, Xiuxiu Xie, Guoyu Bi, Hongping Ba, Lin Li, Jinxia Zhang, Xiaofei Deng, Yao Yao, Zhaohui Tang,[...]. Autophagy 2019
40
50

Hepatocyte ATF3 protects against atherosclerosis by regulating HDL and bile acid metabolism.
Yanyong Xu, Yuanyuan Li, Kavita Jadhav, Xiaoli Pan, Yingdong Zhu, Shuwei Hu, Shaoru Chen, Liuying Chen, Yong Tang, Helen H Wang,[...]. Nat Metab 2021
6
50


Role of phosphatidylinositol 4-phosphate (PI4P) and its binding protein GOLPH3 in hepatitis C virus secretion.
Bryan Bishé, Gulam H Syed, Seth J Field, Aleem Siddiqui. J Biol Chem 2012
72
50

Autophagy and metabolism.
Joshua D Rabinowitz, Eileen White. Science 2010
50

Single-cell RNA sequencing identifies celltype-specific cis-eQTLs and co-expression QTLs.
Monique G P van der Wijst, Harm Brugge, Dylan H de Vries, Patrick Deelen, Morris A Swertz, Lude Franke. Nat Genet 2018
103
50

Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
Erez Lieberman-Aiden, Nynke L van Berkum, Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner,[...]. Science 2009
50

minimac2: faster genotype imputation.
Christian Fuchsberger, Gonçalo R Abecasis, David A Hinds. Bioinformatics 2015
224
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.