A citation-based method for searching scientific literature

Clare S K Lee, Ming Fung Cheung, Jinsen Li, Yongqian Zhao, Wai Hei Lam, Vincy Ho, Remo Rohs, Yuanliang Zhai, Danny Leung, Bik-Kwoon Tye. Nat Commun 2021
Times Cited: 8







List of co-cited articles
64 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Conserved nucleosome positioning defines replication origins.
Matthew L Eaton, Kyriaki Galani, Sukhyun Kang, Stephen P Bell, David M MacAlpine. Genes Dev 2010
255
50

H2A.Z facilitates licensing and activation of early replication origins.
Haizhen Long, Liwei Zhang, Mengjie Lv, Zengqi Wen, Wenhao Zhang, Xiulan Chen, Peitao Zhang, Tongqing Li, Luyuan Chang, Caiwei Jin,[...]. Nature 2020
57
50


Structure of the origin recognition complex bound to DNA replication origin.
Ningning Li, Wai Hei Lam, Yuanliang Zhai, Jiaxuan Cheng, Erchao Cheng, Yongqian Zhao, Ning Gao, Bik-Kwoon Tye. Nature 2018
63
37

Mechanism of head-to-head MCM double-hexamer formation revealed by cryo-EM.
Thomas C R Miller, Julia Locke, Julia F Greiwe, John F X Diffley, Alessandro Costa. Nature 2019
47
37

Unraveling cell type-specific and reprogrammable human replication origin signatures associated with G-quadruplex consensus motifs.
Emilie Besnard, Amélie Babled, Laure Lapasset, Ollivier Milhavet, Hugues Parrinello, Christelle Dantec, Jean-Michel Marin, Jean-Marc Lemaitre. Nat Struct Mol Biol 2012
254
37



The chromatin environment shapes DNA replication origin organization and defines origin classes.
Christelle Cayrou, Benoit Ballester, Isabelle Peiffer, Romain Fenouil, Philippe Coulombe, Jean-Christophe Andrau, Jacques van Helden, Marcel Méchali. Genome Res 2015
94
37

Genome-wide analysis of the spatiotemporal regulation of firing and dormant replication origins in human cells.
Nozomi Sugimoto, Kazumitsu Maehara, Kazumasa Yoshida, Yasuyuki Ohkawa, Masatoshi Fujita. Nucleic Acids Res 2018
35
37

Replication landscape of the human genome.
Nataliya Petryk, Malik Kahli, Yves d'Aubenton-Carafa, Yan Jaszczyszyn, Yimin Shen, Maud Silvain, Claude Thermes, Chun-Long Chen, Olivier Hyrien. Nat Commun 2016
148
37

Excess MCM proteins protect human cells from replicative stress by licensing backup origins of replication.
Arkaitz Ibarra, Etienne Schwob, Juan Méndez. Proc Natl Acad Sci U S A 2008
318
37

Concerted loading of Mcm2-7 double hexamers around DNA during DNA replication origin licensing.
Dirk Remus, Fabienne Beuron, Gökhan Tolun, Jack D Griffith, Edward P Morris, John F X Diffley. Cell 2009
436
37


Replication Licensing Aberrations, Replication Stress, and Genomic Instability.
Michalis Petropoulos, Spyridon Champeris Tsaniras, Stavros Taraviras, Zoi Lygerou. Trends Biochem Sci 2019
41
25

Replication Fork Activation Is Enabled by a Single-Stranded DNA Gate in CMG Helicase.
Michael R Wasserman, Grant D Schauer, Michael E O'Donnell, Shixin Liu. Cell 2019
53
25

Regulated eukaryotic DNA replication origin firing with purified proteins.
Joseph T P Yeeles, Tom D Deegan, Agnieszka Janska, Anne Early, John F X Diffley. Nature 2015
300
25

Replication licensing promotes cyclin D1 expression and G1 progression in untransformed human cells.
Peijun Liu, Damien M Slater, Marc Lenburg, Kathleen Nevis, Jeanette Gowen Cook, Cyrus Vaziri. Cell Cycle 2009
49
25

Involvement of G-quadruplex regions in mammalian replication origin activity.
Paulina Prorok, Marie Artufel, Antoine Aze, Philippe Coulombe, Isabelle Peiffer, Laurent Lacroix, Aurore Guédin, Jean-Louis Mergny, Julia Damaschke, Aloys Schepers,[...]. Nat Commun 2019
62
25

Metazoan DNA replication origins.
Olivier Ganier, Paulina Prorok, Ildem Akerman, Marcel Méchali. Curr Opin Cell Biol 2019
22
25

Structure of the eukaryotic MCM complex at 3.8 Å.
Ningning Li, Yuanliang Zhai, Yixiao Zhang, Wanqiu Li, Maojun Yang, Jianlin Lei, Bik-Kwoon Tye, Ning Gao. Nature 2015
162
25




ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA.
Christian Speck, Zhiqiang Chen, Huilin Li, Bruce Stillman. Nat Struct Mol Biol 2005
147
25

Structural basis of Mcm2-7 replicative helicase loading by ORC-Cdc6 and Cdt1.
Zuanning Yuan, Alberto Riera, Lin Bai, Jingchuan Sun, Saikat Nandi, Christos Spanos, Zhuo Angel Chen, Marta Barbon, Juri Rappsilber, Bruce Stillman,[...]. Nat Struct Mol Biol 2017
86
25

Preparation for DNA replication: the key to a successful S phase.
Juanita C Limas, Jeanette Gowen Cook. FEBS Lett 2019
21
25

Single-molecule studies of origin licensing reveal mechanisms ensuring bidirectional helicase loading.
Simina Ticau, Larry J Friedman, Nikola A Ivica, Jeff Gelles, Stephen P Bell. Cell 2015
122
25

A double-hexameric MCM2-7 complex is loaded onto origin DNA during licensing of eukaryotic DNA replication.
Cecile Evrin, Pippa Clarke, Juergen Zech, Rudi Lurz, Jingchuan Sun, Stefan Uhle, Huilin Li, Bruce Stillman, Christian Speck. Proc Natl Acad Sci U S A 2009
366
25

A Meier-Gorlin syndrome mutation in a conserved C-terminal helix of Orc6 impedes origin recognition complex formation.
Franziska Bleichert, Maxim Balasov, Igor Chesnokov, Eva Nogales, Michael R Botchan, James M Berger. Elife 2013
36
25

Cell type-specific responses of human cells to inhibition of replication licensing.
S Shreeram, Alison Sparks, David P Lane, J Julian Blow. Oncogene 2002
149
25

Deregulated cyclin E induces chromosome instability.
C H Spruck, K A Won, S I Reed. Nature 1999
580
25

Rapid DNA replication origin licensing protects stem cell pluripotency.
Jacob Peter Matson, Raluca Dumitru, Philip Coryell, Ryan M Baxley, Weili Chen, Kirk Twaroski, Beau R Webber, Jakub Tolar, Anja-Katrin Bielinsky, Jeremy E Purvis,[...]. Elife 2017
43
25

A WD-repeat protein stabilizes ORC binding to chromatin.
Zhen Shen, Kizhakke M Sathyan, Yijie Geng, Ruiping Zheng, Arindam Chakraborty, Brian Freeman, Fei Wang, Kannanganattu V Prasanth, Supriya G Prasanth. Mol Cell 2010
88
25


Deregulation of cyclin E in human cells interferes with prereplication complex assembly.
Susanna Ekholm-Reed, Juan Méndez, Donato Tedesco, Anders Zetterberg, Bruce Stillman, Steven I Reed. J Cell Biol 2004
225
25

Transcription initiation activity sets replication origin efficiency in mammalian cells.
Joana Sequeira-Mendes, Ramón Díaz-Uriarte, Anwyn Apedaile, Derek Huntley, Neil Brockdorff, María Gómez. PLoS Genet 2009
169
25

Origin licensing and p53 status regulate Cdk2 activity during G(1).
Kathleen R Nevis, Marila Cordeiro-Stone, Jeanette Gowen Cook. Cell Cycle 2009
55
25


Genome-wide studies highlight indirect links between human replication origins and gene regulation.
Jean-Charles Cadoret, Françoise Meisch, Vahideh Hassan-Zadeh, Isabelle Luyten, Claire Guillet, Laurent Duret, Hadi Quesneville, Marie-Noëlle Prioleau. Proc Natl Acad Sci U S A 2008
208
25

Mechanisms and regulation of DNA replication initiation in eukaryotes.
Matthew W Parker, Michael R Botchan, James M Berger. Crit Rev Biochem Mol Biol 2017
91
25


A predictable conserved DNA base composition signature defines human core DNA replication origins.
Ildem Akerman, Bahar Kasaai, Alina Bazarova, Pau Biak Sang, Isabelle Peiffer, Marie Artufel, Romain Derelle, Gabrielle Smith, Marta Rodriguez-Martinez, Manuela Romano,[...]. Nat Commun 2020
10
25

Order from clutter: selective interactions at mammalian replication origins.
Mirit I Aladjem, Christophe E Redon. Nat Rev Genet 2017
36
25

Temporal association of ORCA/LRWD1 to late-firing origins during G1 dictates heterochromatin replication and organization.
Yating Wang, Abid Khan, Anna B Marks, Owen K Smith, Sumanprava Giri, Yo-Chuen Lin, Rachel Creager, David M MacAlpine, Kannanganattu V Prasanth, Mirit I Aladjem,[...]. Nucleic Acids Res 2017
22
25


Evolution of DNA replication origin specification and gene silencing mechanisms.
Y Hu, A Tareen, Y-J Sheu, W T Ireland, C Speck, H Li, L Joshua-Tor, J B Kinney, B Stillman. Nat Commun 2020
10
25

Chromosome Duplication in Saccharomyces cerevisiae.
Stephen P Bell, Karim Labib. Genetics 2016
190
25

The conserved bromo-adjacent homology domain of yeast Orc1 functions in the selection of DNA replication origins within chromatin.
Philipp Müller, Sookhee Park, Erika Shor, Dana J Huebert, Christopher L Warren, Aseem Z Ansari, Michael Weinreich, Matthew L Eaton, David M MacAlpine, Catherine A Fox. Genes Dev 2010
56
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.