A citation-based method for searching scientific literature

Hideki Kandori. Adv Exp Med Biol 2021
Times Cited: 2







List of co-cited articles
2 articles co-cited >1



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Channelrhodopsin unchained: structure and mechanism of a light-gated cation channel.
Víctor A Lórenz-Fonfría, Joachim Heberle. Biochim Biophys Acta 2014
82
100

Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.
Oliver P Ernst, David T Lodowski, Marcus Elstner, Peter Hegemann, Leonid S Brown, Hideki Kandori. Chem Rev 2014
523
100

Crystal structure of heliorhodopsin.
Wataru Shihoya, Keiichi Inoue, Manish Singh, Masae Konno, Shoko Hososhima, Keitaro Yamashita, Kento Ikeda, Akimitsu Higuchi, Tamaki Izume, Sae Okazaki,[...]. Nature 2019
20
50

Hydrogen Bonding Environments in the Photocycle Process around the Flavin Chromophore of the AppA-BLUF domain.
Tatsuya Iwata, Takashi Nagai, Shota Ito, Shinsuke Osoegawa, Mineo Iseki, Masakatsu Watanabe, Masashi Unno, Shinya Kitagawa, Hideki Kandori. J Am Chem Soc 2018
17
50

The role of protein-bound water molecules in microbial rhodopsins.
Klaus Gerwert, Erik Freier, Steffen Wolf. Biochim Biophys Acta 2014
78
50

Low-temperature FTIR spectroscopy provides evidence for protein-bound water molecules in eubacterial light-driven ion pumps.
Yurika Nomura, Shota Ito, Miwako Teranishi, Hikaru Ono, Keiichi Inoue, Hideki Kandori. Phys Chem Chem Phys 2018
5
50

Microbial Rhodopsins: Diversity, Mechanisms, and Optogenetic Applications.
Elena G Govorunova, Oleg A Sineshchekov, Hai Li, John L Spudich. Annu Rev Biochem 2017
120
50


Microbial rhodopsins: wide distribution, rich diversity and great potential.
Marie Kurihara, Yuki Sudo. Biophys Physicobiol 2015
23
50


A distinct abundant group of microbial rhodopsins discovered using functional metagenomics.
Alina Pushkarev, Keiichi Inoue, Shirley Larom, José Flores-Uribe, Manish Singh, Masae Konno, Sahoko Tomida, Shota Ito, Ryoko Nakamura, Satoshi P Tsunoda,[...]. Nature 2018
74
50

Strongly hydrogen-bonded water molecules in the Schiff base region of rhodopsins.
Yuji Furutani, Mikihiro Shibata, Hideki Kandori. Photochem Photobiol Sci 2005
32
50

Infrared spectroscopic analysis on structural changes around the protonated Schiff base upon retinal isomerization in light-driven sodium pump KR2.
Sahoko Tomida, Shota Ito, Tomoya Mato, Yuji Furutani, Keiichi Inoue, Hideki Kandori. Biochim Biophys Acta Bioenerg 2020
6
50

Resonance Raman spectroscopy of specifically [epsilon-15N]lysine-labeled bacteriorhodopsin.
P V Argade, K J Rothschild, A H Kawamoto, J Herzfeld, W C Herlihy. Proc Natl Acad Sci U S A 1981
30
50

Optogenetic Modulation of Ion Channels by Photoreceptive Proteins.
Hisao Tsukamoto, Yuji Furutani. Adv Exp Med Biol 2021
2
50

FTIR study of the retinal Schiff base and internal water molecules of proteorhodopsin.
Daisuke Ikeda, Yuji Furutani, Hideki Kandori. Biochemistry 2007
60
50


Optogenetic Potentials of Diverse Animal Opsins: Parapinopsin, Peropsin, LWS Bistable Opsin.
Mitsumasa Koyanagi, Tomoka Saito, Seiji Wada, Takashi Nagata, Emi Kawano-Yamashita, Akihisa Terakita. Adv Exp Med Biol 2021
2
50

FTIR spectroscopy of a light-driven compatible sodium ion-proton pumping rhodopsin at 77 K.
Hikaru Ono, Keiichi Inoue, Rei Abe-Yoshizumi, Hideki Kandori. J Phys Chem B 2014
35
50

A G protein-coupled receptor at work: the rhodopsin model.
Klaus Peter Hofmann, Patrick Scheerer, Peter W Hildebrand, Hui-Woog Choe, Jung Hee Park, Martin Heck, Oliver P Ernst. Trends Biochem Sci 2009
264
50

Interaction of tryptophan-182 with the retinal 9-methyl group in the L intermediate of bacteriorhodopsin.
Y Yamazaki, J Sasaki, M Hatanaka, H Kandori, A Maeda, R Needleman, T Shinada, K Yoshihara, L S Brown, J K Lanyi. Biochemistry 1995
62
50


High-resolution structural insights into the heliorhodopsin family.
K Kovalev, D Volkov, R Astashkin, A Alekseev, I Gushchin, J M Haro-Moreno, I Chizhov, S Siletsky, M Mamedov, A Rogachev,[...]. Proc Natl Acad Sci U S A 2020
16
50


Opn5L1 is a retinal receptor that behaves as a reverse and self-regenerating photoreceptor.
Keita Sato, Takahiro Yamashita, Hideyo Ohuchi, Atsuko Takeuchi, Hitoshi Gotoh, Katsuhiko Ono, Misao Mizuno, Yasuhisa Mizutani, Sayuri Tomonari, Kazumi Sakai,[...]. Nat Commun 2018
7
50


Resonance Raman Investigation of the Chromophore Structure of Heliorhodopsins.
Akihiro Otomo, Misao Mizuno, Manish Singh, Wataru Shihoya, Keiichi Inoue, Osamu Nureki, Oded Béjà, Hideki Kandori, Yasuhisa Mizutani. J Phys Chem Lett 2018
16
50


Vibrational modes of the protonated Schiff base in pharaonis phoborhodopsin.
Kazumi Shimono, Yuji Furutani, Naoki Kamo, Hideki Kandori. Biochemistry 2003
25
50

Fourier-transform infrared difference spectroscopy of rhodopsin and its photoproducts at low temperature.
K A Bagley, V Balogh-Nair, A A Croteau, G Dollinger, T G Ebrey, L Eisenstein, M K Hong, K Nakanishi, J Vittitow. Biochemistry 1985
84
50



Mutation Study of Heliorhodopsin 48C12.
Manish Singh, Keiichi Inoue, Alina Pushkarev, Oded Béjà, Hideki Kandori. Biochemistry 2018
14
50

Cone visual pigments.
Yasushi Imamoto, Yoshinori Shichida. Biochim Biophys Acta 2014
35
50

Membrane Protein Analyses Using Alkylated Trihydroxyacetophenone (ATHAP) as a MALDI Matrix.
Yuko Fukuyama, Chihiro Nakajima, Shunsuke Izumi, Koichi Tanaka. Anal Chem 2016
6
50

Proton transfer via a transient linear water-molecule chain in a membrane protein.
Erik Freier, Steffen Wolf, Klaus Gerwert. Proc Natl Acad Sci U S A 2011
125
50

Hydrogen-bonding alterations of the protonated Schiff base and water molecule in the chloride pump of Natronobacterium pharaonis.
Mikihiro Shibata, Norikazu Muneda, Takanori Sasaki, Kazumi Shimono, Naoki Kamo, Makoto Demura, Hideki Kandori. Biochemistry 2005
48
50


Crystal structure of heliorhodopsin 48C12.
Yang Lu, X Edward Zhou, Xiang Gao, Na Wang, Ruixue Xia, Zhenmei Xu, Yu Leng, Yuying Shi, Guangfu Wang, Karsten Melcher,[...]. Cell Res 2020
6
50

Structural change of threonine 89 upon photoisomerization in bacteriorhodopsin as revealed by polarized FTIR spectroscopy.
H Kandori, N Kinoshita, Y Yamazaki, A Maeda, Y Shichida, R Needleman, J K Lanyi, M Bizounok, J Herzfeld, J Raap,[...]. Biochemistry 1999
48
50

Anion binding to mutants of the Schiff base counterion in heliorhodopsin 48C12.
Manish Singh, Kota Katayama, Oded Béjà, Hideki Kandori. Phys Chem Chem Phys 2019
4
50

Advances in understanding the molecular basis of the first steps in color vision.
Lukas Hofmann, Krzysztof Palczewski. Prog Retin Eye Res 2015
22
50

Photochemical Characterization of a New Heliorhodopsin from the Gram-Negative Eubacterium Bellilinea caldifistulae (BcHeR) and Comparison with Heliorhodopsin-48C12.
Atsushi Shibukawa, Keiichi Kojima, Yu Nakajima, Yosuke Nishimura, Susumu Yoshizawa, Yuki Sudo. Biochemistry 2019
6
50

Tight Asp-85--Thr-89 association during the pump switch of bacteriorhodopsin.
H Kandori, Y Yamazaki, Y Shichida, J Raap, J Lugtenburg, M Belenky, J Herzfeld. Proc Natl Acad Sci U S A 2001
65
50

Multi-level convergence of complex traits and the evolution of bioluminescence.
Emily S Lau, Todd H Oakley. Biol Rev Camb Philos Soc 2021
3
50

Photoreceptors Take Charge: Emerging Principles for Light Sensing.
Tilman Kottke, Aihua Xie, Delmar S Larsen, Wouter D Hoff. Annu Rev Biophys 2018
29
50

Hydrogen bond dynamics in the active site of photoactive yellow protein.
Paul A Sigala, Mark A Tsuchida, Daniel Herschlag. Proc Natl Acad Sci U S A 2009
55
50



Signal Percolation within a Bacterial Community.
Joseph W Larkin, Xiaoling Zhai, Kaito Kikuchi, Samuel E Redford, Arthur Prindle, Jintao Liu, Sacha Greenfield, Aleksandra M Walczak, Jordi Garcia-Ojalvo, Andrew Mugler,[...]. Cell Syst 2018
32
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.