A citation-based method for searching scientific literature

Yalan Yang, Xinhao Fan, Junyu Yan, Muya Chen, Min Zhu, Yijie Tang, Siyuan Liu, Zhonglin Tang. Nucleic Acids Res 2021
Times Cited: 11







List of co-cited articles
69 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation.
Jian-Fu Chen, Elizabeth M Mandel, J Michael Thomson, Qiulian Wu, Thomas E Callis, Scott M Hammond, Frank L Conlon, Da-Zhi Wang. Nat Genet 2006
36

Trimmomatic: a flexible trimmer for Illumina sequence data.
Anthony M Bolger, Marc Lohse, Bjoern Usadel. Bioinformatics 2014
36

Circular RNA profiling reveals an abundant circLMO7 that regulates myoblasts differentiation and survival by sponging miR-378a-3p.
Xuefeng Wei, Hui Li, Jiameng Yang, Dan Hao, Dong Dong, Yongzhen Huang, Xianyong Lan, Martin Plath, Chuzhao Lei, Fengpeng Lin,[...]. Cell Death Dis 2017
107
27

Circ-ZNF609 Is a Circular RNA that Can Be Translated and Functions in Myogenesis.
Ivano Legnini, Gaia Di Timoteo, Francesca Rossi, Mariangela Morlando, Francesca Briganti, Olga Sthandier, Alessandro Fatica, Tiziana Santini, Adrian Andronache, Mark Wade,[...]. Mol Cell 2017
27


Fast gapped-read alignment with Bowtie 2.
Ben Langmead, Steven L Salzberg. Nat Methods 2012
27

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
27


The requirement of Mettl3-promoted MyoD mRNA maintenance in proliferative myoblasts for skeletal muscle differentiation.
Kensuke Kudou, Tetsuro Komatsu, Jumpei Nogami, Kazumitsu Maehara, Akihito Harada, Hiroshi Saeki, Eiji Oki, Yoshihiko Maehara, Yasuyuki Ohkawa. Open Biol 2017
33
18

Mammalian WTAP is a regulatory subunit of the RNA N6-methyladenosine methyltransferase.
Xiao-Li Ping, Bao-Fa Sun, Lu Wang, Wen Xiao, Xin Yang, Wen-Jia Wang, Samir Adhikari, Yue Shi, Ying Lv, Yu-Sheng Chen,[...]. Cell Res 2014
868
18

5' UTR m(6)A Promotes Cap-Independent Translation.
Kate D Meyer, Deepak P Patil, Jun Zhou, Alexandra Zinoviev, Maxim A Skabkin, Olivier Elemento, Tatyana V Pestova, Shu-Bing Qian, Samie R Jaffrey. Cell 2015
782
18

MicroRNA-148a promotes myogenic differentiation by targeting the ROCK1 gene.
Jing Zhang, Zheng-zhou Ying, Zhong-lin Tang, Liang-qi Long, Kui Li. J Biol Chem 2012
97
18

A defined N6-methyladenosine (m6A) profile conferred by METTL3 regulates muscle stem cell/myoblast state transitions.
Brandon J Gheller, Jamie E Blum, Ern Hwei Hannah Fong, Olga V Malysheva, Benjamin D Cosgrove, Anna E Thalacker-Mercer. Cell Death Discov 2020
10
20

High-resolution mapping reveals a conserved, widespread, dynamic mRNA methylation program in yeast meiosis.
Schraga Schwartz, Sudeep D Agarwala, Maxwell R Mumbach, Marko Jovanovic, Philipp Mertins, Alexander Shishkin, Yuval Tabach, Tarjei S Mikkelsen, Rahul Satija, Gary Ruvkun,[...]. Cell 2013
352
18


Post-transcriptional gene regulation by mRNA modifications.
Boxuan Simen Zhao, Ian A Roundtree, Chuan He. Nat Rev Mol Cell Biol 2017
701
18

N6-methyladenosine-dependent regulation of messenger RNA stability.
Xiao Wang, Zhike Lu, Adrian Gomez, Gary C Hon, Yanan Yue, Dali Han, Ye Fu, Marc Parisien, Qing Dai, Guifang Jia,[...]. Nature 2014
18

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.
Dan Dominissini, Sharon Moshitch-Moshkovitz, Schraga Schwartz, Mali Salmon-Divon, Lior Ungar, Sivan Osenberg, Karen Cesarkas, Jasmine Jacob-Hirsch, Ninette Amariglio, Martin Kupiec,[...]. Nature 2012
18

A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation.
Jianzhao Liu, Yanan Yue, Dali Han, Xiao Wang, Ye Fu, Liang Zhang, Guifang Jia, Miao Yu, Zhike Lu, Xin Deng,[...]. Nat Chem Biol 2014
18

A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA.
Marcella Cesana, Davide Cacchiarelli, Ivano Legnini, Tiziana Santini, Olga Sthandier, Mauro Chinappi, Anna Tramontano, Irene Bozzoni. Cell 2011
18

Gene expression regulation mediated through reversible m⁶A RNA methylation.
Ye Fu, Dan Dominissini, Gideon Rechavi, Chuan He. Nat Rev Genet 2014
713
18

MicroRNA-21 Regulates PI3K/Akt/mTOR Signaling by Targeting TGFβI during Skeletal Muscle Development in Pigs.
Lijing Bai, Ruyi Liang, Yalan Yang, Xinhua Hou, Zishuai Wang, Shiyun Zhu, Chuduan Wang, Zhonglin Tang, Kui Li. PLoS One 2015
42
18

FTO-dependent demethylation of N6-methyladenosine regulates mRNA splicing and is required for adipogenesis.
Xu Zhao, Ying Yang, Bao-Fa Sun, Yue Shi, Xin Yang, Wen Xiao, Ya-Juan Hao, Xiao-Li Ping, Yu-Sheng Chen, Wen-Jia Wang,[...]. Cell Res 2014
503
18

Longitudinal epitranscriptome profiling reveals the crucial role of N6-methyladenosine methylation in porcine prenatal skeletal muscle development.
Xinxin Zhang, Yilong Yao, Jinghua Han, Yalan Yang, Yun Chen, Zhonglin Tang, Fei Gao. J Genet Genomics 2020
7
28

N6-Methyladenosine modification of lincRNA 1281 is critically required for mESC differentiation potential.
Dandan Yang, Jing Qiao, Guiying Wang, Yuanyuan Lan, Guoping Li, Xudong Guo, Jiajie Xi, Dan Ye, Songcheng Zhu, Wen Chen,[...]. Nucleic Acids Res 2018
109
18


METTL3 inhibits BMSC adipogenic differentiation by targeting the JAK1/STAT5/C/EBPβ pathway via an m6A-YTHDF2-dependent manner.
Yongxi Yao, Zhen Bi, Ruifan Wu, Yuanling Zhao, Youhua Liu, Qing Liu, Yizhen Wang, Xinxia Wang. FASEB J 2019
46
18

ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility.
Guanqun Zheng, John Arne Dahl, Yamei Niu, Peter Fedorcsak, Chun-Min Huang, Charles J Li, Cathrine B Vågbø, Yue Shi, Wen-Ling Wang, Shu-Hui Song,[...]. Mol Cell 2013
18

RNA-methylation-dependent RNA processing controls the speed of the circadian clock.
Jean-Michel Fustin, Masao Doi, Yoshiaki Yamaguchi, Hayashi Hida, Shinichi Nishimura, Minoru Yoshida, Takayuki Isagawa, Masaki Suimye Morioka, Hideaki Kakeya, Ichiro Manabe,[...]. Cell 2013
511
18

N(6)-methyladenosine Modulates Messenger RNA Translation Efficiency.
Xiao Wang, Boxuan Simen Zhao, Ian A Roundtree, Zhike Lu, Dali Han, Honghui Ma, Xiaocheng Weng, Kai Chen, Hailing Shi, Chuan He. Cell 2015
18

METTL3 is essential for postnatal development of brown adipose tissue and energy expenditure in mice.
Yuqin Wang, Ming Gao, Fuxing Zhu, Xinzhi Li, Ying Yang, Qiuxin Yan, Linna Jia, Liwei Xie, Zheng Chen. Nat Commun 2020
15
18

Transcriptome-wide N 6 -methyladenosine methylome profiling of porcine muscle and adipose tissues reveals a potential mechanism for transcriptional regulation and differential methylation pattern.
Xuelian Tao, Jianning Chen, Yanzhi Jiang, Yingying Wei, Yan Chen, Huaming Xu, Li Zhu, Guoqing Tang, Mingzhou Li, Anan Jiang,[...]. BMC Genomics 2017
18
18

HNRNPA2B1 Is a Mediator of m(6)A-Dependent Nuclear RNA Processing Events.
Claudio R Alarcón, Hani Goodarzi, Hyeseung Lee, Xuhang Liu, Saeed Tavazoie, Sohail F Tavazoie. Cell 2015
541
18

N6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO.
Guifang Jia, Ye Fu, Xu Zhao, Qing Dai, Guanqun Zheng, Ying Yang, Chengqi Yi, Tomas Lindahl, Tao Pan, Yun-Gui Yang,[...]. Nat Chem Biol 2011
18

Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.
Kate D Meyer, Yogesh Saletore, Paul Zumbo, Olivier Elemento, Christopher E Mason, Samie R Jaffrey. Cell 2012
18

Comparative analyses by sequencing of transcriptomes during skeletal muscle development between pig breeds differing in muscle growth rate and fatness.
Xiao Zhao, Delin Mo, Anning Li, Wen Gong, Shuqi Xiao, Yue Zhang, Limei Qin, Yuna Niu, Yunxue Guo, Xiaohong Liu,[...]. PLoS One 2011
95
18

Recognition of RNA N6-methyladenosine by IGF2BP proteins enhances mRNA stability and translation.
Huilin Huang, Hengyou Weng, Wenju Sun, Xi Qin, Hailing Shi, Huizhe Wu, Boxuan Simen Zhao, Ana Mesquita, Chang Liu, Celvie L Yuan,[...]. Nat Cell Biol 2018
601
18

Mrf4 determines skeletal muscle identity in Myf5:Myod double-mutant mice.
Lina Kassar-Duchossoy, Barbara Gayraud-Morel, Danielle Gomès, Didier Rocancourt, Margaret Buckingham, Vasily Shinin, Shahragim Tajbakhsh. Nature 2004
413
18

m6A potentiates Sxl alternative pre-mRNA splicing for robust Drosophila sex determination.
Irmgard U Haussmann, Zsuzsanna Bodi, Eugenio Sanchez-Moran, Nigel P Mongan, Nathan Archer, Rupert G Fray, Matthias Soller. Nature 2016
262
18

Anti-tumour immunity controlled through mRNA m6A methylation and YTHDF1 in dendritic cells.
Dali Han, Jun Liu, Chuanyuan Chen, Lihui Dong, Yi Liu, Renbao Chang, Xiaona Huang, Yuanyuan Liu, Jianying Wang, Urszula Dougherty,[...]. Nature 2019
265
18

MTCH2 promotes adipogenesis in intramuscular preadipocytes via an m6A-YTHDF1-dependent mechanism.
Qin Jiang, Baofa Sun, Qing Liu, Min Cai, Ruifan Wu, Fengqin Wang, Yongxi Yao, Yizhen Wang, Xinxia Wang. FASEB J 2019
31
18

FTO is required for myogenesis by positively regulating mTOR-PGC-1α pathway-mediated mitochondria biogenesis.
Xiaobo Wang, Ning Huang, Min Yang, Dandan Wei, Haoran Tai, Xiaojuan Han, Hui Gong, Jiao Zhou, Jianqiong Qin, Xiawei Wei,[...]. Cell Death Dis 2017
50
18

Zfp217 mediates m6A mRNA methylation to orchestrate transcriptional and post-transcriptional regulation to promote adipogenic differentiation.
Tongxing Song, Yang Yang, Hongkui Wei, Xiaowei Xie, Jinxin Lu, Qianhui Zeng, Jie Peng, Yuanfei Zhou, Siwen Jiang, Jian Peng. Nucleic Acids Res 2019
41
18

Adaptation and possible ancient interspecies introgression in pigs identified by whole-genome sequencing.
Huashui Ai, Xiaodong Fang, Bin Yang, Zhiyong Huang, Hao Chen, Likai Mao, Feng Zhang, Lu Zhang, Leilei Cui, Weiming He,[...]. Nat Genet 2015
158
18


Dynamics of muscle fibre growth during postnatal mouse development.
Robert B White, Anne-Sophie Biérinx, Viola F Gnocchi, Peter S Zammit. BMC Dev Biol 2010
294
18

CircFUT10 reduces proliferation and facilitates differentiation of myoblasts by sponging miR-133a.
Hui Li, Jiameng Yang, Xuefeng Wei, Chengchuang Song, Dong Dong, Yongzhen Huang, Xianyong Lan, Martin Plath, Chuzhao Lei, Yun Ma,[...]. J Cell Physiol 2018
79
18

Cellular and molecular regulation of muscle regeneration.
Sophie B P Chargé, Michael A Rudnicki. Physiol Rev 2004
18

Circular RNA: A new star of noncoding RNAs.
Shibin Qu, Xisheng Yang, Xiaolei Li, Jianlin Wang, Yuan Gao, Runze Shang, Wei Sun, Kefeng Dou, Haimin Li. Cancer Lett 2015
929
18

Circular RNA TTN Acts As a miR-432 Sponge to Facilitate Proliferation and Differentiation of Myoblasts via the IGF2/PI3K/AKT Signaling Pathway.
Xiaogang Wang, Xiukai Cao, Dong Dong, Xuemei Shen, Jie Cheng, Rui Jiang, Zhaoxin Yang, Shujun Peng, Yongzhen Huang, Xianyong Lan,[...]. Mol Ther Nucleic Acids 2019
32
18


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.