A citation-based method for searching scientific literature

Marco Di Stefano, Hans-Wilhelm Nützmann, Marc A Marti-Renom, Daniel Jost. Nucleic Acids Res 2021
Times Cited: 3







List of co-cited articles
15 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Plant lamin-like proteins mediate chromatin tethering at the nuclear periphery.
Bo Hu, Nan Wang, Xiuli Bi, Ezgi Süheyla Karaaslan, Anna-Lena Weber, Wangsheng Zhu, Kenneth Wayne Berendzen, Chang Liu. Genome Biol 2019
37
66

Nonrandom domain organization of the Arabidopsis genome at the nuclear periphery.
Xiuli Bi, Ying-Juan Cheng, Bo Hu, Xiaoli Ma, Rui Wu, Jia-Wei Wang, Chang Liu. Genome Res 2017
54
66



3D Chromatin Architecture of Large Plant Genomes Determined by Local A/B Compartments.
Pengfei Dong, Xiaoyu Tu, Po-Yu Chu, Peitao Lü, Ning Zhu, Donald Grierson, Baijuan Du, Pinghua Li, Silin Zhong. Mol Plant 2017
100
66


Active and repressed biosynthetic gene clusters have spatially distinct chromosome states.
Hans-Wilhelm Nützmann, Daniel Doerr, América Ramírez-Colmenero, Jesús Emiliano Sotelo-Fonseca, Eva Wegel, Marco Di Stefano, Steven W Wingett, Peter Fraser, Laurence Hurst, Selene L Fernandez-Valverde,[...]. Proc Natl Acad Sci U S A 2020
15
66

The Novel Nuclear Envelope Protein KAKU4 Modulates Nuclear Morphology in Arabidopsis.
Chieko Goto, Kentaro Tamura, Yoichiro Fukao, Tomoo Shimada, Ikuko Hara-Nishimura. Plant Cell 2014
51
66

Wheat chromatin architecture is organized in genome territories and transcription factories.
Lorenzo Concia, Alaguraj Veluchamy, Juan S Ramirez-Prado, Azahara Martin-Ramirez, Ying Huang, Magali Perez, Severine Domenichini, Natalia Y Rodriguez Granados, Soonkap Kim, Thomas Blein,[...]. Genome Biol 2020
24
66

Tidying-up the plant nuclear space: domains, functions, and dynamics.
Ana Paula Santos, Valérie Gaudin, Iva Mozgová, Frédéric Pontvianne, Daniel Schubert, Ahmet L Tek, Martina Dvořáčková, Chang Liu, Paul Fransz, Stefanie Rosa,[...]. J Exp Bot 2020
7
66

Chromatin position effects assayed by thousands of reporters integrated in parallel.
Waseem Akhtar, Johann de Jong, Alexey V Pindyurin, Ludo Pagie, Wouter Meuleman, Jeroen de Ridder, Anton Berns, Lodewyk F A Wessels, Maarten van Lohuizen, Bas van Steensel. Cell 2013
176
66

Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate.
Paul Fransz, J Hans De Jong, Martin Lysak, Monica Ruffini Castiglione, Ingo Schubert. Proc Natl Acad Sci U S A 2002
300
66

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions.
Lars Guelen, Ludo Pagie, Emilie Brasset, Wouter Meuleman, Marius B Faza, Wendy Talhout, Bert H Eussen, Annelies de Klein, Lodewyk Wessels, Wouter de Laat,[...]. Nature 2008
66

Formation of Chromosomal Domains by Loop Extrusion.
Geoffrey Fudenberg, Maxim Imakaev, Carolyn Lu, Anton Goloborodko, Nezar Abdennur, Leonid A Mirny. Cell Rep 2016
668
66

The chromatin insulator CTCF and the emergence of metazoan diversity.
Peter Heger, Birger Marin, Marek Bartkuhn, Einhard Schierenberg, Thomas Wiehe. Proc Natl Acad Sci U S A 2012
95
66

The carboxyl-terminal region common to lamins A and C contains a DNA binding domain.
Vérène Stierlé, Joël Couprie, Cecilia Ostlund, Isabelle Krimm, Sophie Zinn-Justin, Paul Hossenlopp, Howard J Worman, Jean-Claude Courvalin, Isabelle Duband-Goulet. Biochemistry 2003
132
33


Peripheral framework of carrot cell nucleus contains a novel protein predicted to exhibit a long alpha-helical domain.
K Masuda, Z J Xu, S Takahashi, A Ito, M Ono, K Nomura, M Inoue. Exp Cell Res 1997
100
33

Specific and conserved sequences in D. melanogaster and C. elegans lamins and histone H2A mediate the attachment of lamins to chromosomes.
Anna Mattout, Michal Goldberg, Yonatan Tzur, Ayelet Margalit, Yosef Gruenbaum. J Cell Sci 2007
55
33

SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope.
Ghislain G Cabal, Auguste Genovesio, Susana Rodriguez-Navarro, Christophe Zimmer, Olivier Gadal, Annick Lesne, Henri Buc, Frank Feuerbach-Fournier, Jean-Christophe Olivo-Marin, Eduard C Hurt,[...]. Nature 2006
337
33


DNA sequence-dependent compartmentalization and silencing of chromatin at the nuclear lamina.
Joseph M Zullo, Ignacio A Demarco, Roger Piqué-Regi, Daniel J Gaffney, Charles B Epstein, Chauncey J Spooner, Teresa R Luperchio, Bradley E Bernstein, Jonathan K Pritchard, Karen L Reddy,[...]. Cell 2012
278
33

Exclusion of mRNPs and ribosomal particles from a thin zone beneath the nuclear envelope revealed upon inhibition of transport.
Karin Kylberg, Petra Björk, Nathalie Fomproix, Birgitta Ivarsson, Lars Wieslander, Bertil Daneholt. Exp Cell Res 2010
13
33

Access of torsinA to the inner nuclear membrane is activity dependent and regulated in the endoplasmic reticulum.
Rose E Goodchild, Abigail L Buchwalter, Teresa V Naismith, Kristen Holbrook, Karolien Billion, William T Dauer, Chun-Chi Liang, Mary Lynn Dear, Phyllis I Hanson. J Cell Sci 2015
28
33

Breaching the nuclear envelope in development and disease.
Emily Hatch, Martin Hetzer. J Cell Biol 2014
81
33

Nup82 functions redundantly with Nup136 in a salicylic acid-dependent defense response of Arabidopsis thaliana.
Kentaro Tamura, Yoichiro Fukao, Noriyuki Hatsugai, Fumiaki Katagiri, Ikuko Hara-Nishimura. Nucleus 2017
6
33

Subnuclear segregation of genes and core promoter factors in myogenesis.
Jie Yao, Richard D Fetter, Ping Hu, Eric Betzig, Robert Tjian. Genes Dev 2011
56
33

The Dynamic Nature of the Nuclear Envelope.
Paola De Magistris, Wolfram Antonin. Curr Biol 2018
37
33

Genome-wide maps of nuclear lamina interactions in single human cells.
Jop Kind, Ludo Pagie, Sandra S de Vries, Leila Nahidiazar, Siddharth S Dey, Magda Bienko, Ye Zhan, Bryan Lajoie, Carolyn A de Graaf, Mario Amendola,[...]. Cell 2015
213
33


Global profiling of plant nuclear membrane proteome in Arabidopsis.
Yu Tang, Aobo Huang, Yangnan Gu. Nat Plants 2020
15
33

Subnuclear gene positioning through lamina association affects copper tolerance.
Yuki Sakamoto, Mayuko Sato, Yoshikatsu Sato, Akihito Harada, Takamasa Suzuki, Chieko Goto, Kentaro Tamura, Kiminori Toyooka, Hiroshi Kimura, Yasuyuki Ohkawa,[...]. Nat Commun 2020
7
33

Force exertion in fungal infection.
Martin Bastmeyer, Holger B Deising, Clemens Bechinger. Annu Rev Biophys Biomol Struct 2002
49
33

Nuclear membranes control symbiotic calcium signaling of legumes.
Ward Capoen, Jongho Sun, Derin Wysham, Marisa S Otegui, Muthusubramanian Venkateshwaran, Sibylle Hirsch, Hiroki Miwa, J Allan Downie, Richard J Morris, Jean-Michel Ané,[...]. Proc Natl Acad Sci U S A 2011
98
33

A novel family of plant nuclear envelope-associated proteins.
Vidya Pawar, Axel Poulet, Gwénaëlle Détourné, Christophe Tatout, Emmanuel Vanrobays, David E Evans, Katja Graumann. J Exp Bot 2016
31
33

The structure of the nuclear pore complex.
André Hoelz, Erik W Debler, Günter Blobel. Annu Rev Biochem 2011
284
33


Promoter-Intrinsic and Local Chromatin Features Determine Gene Repression in LADs.
Christ Leemans, Marloes C H van der Zwalm, Laura Brueckner, Federico Comoglio, Tom van Schaik, Ludo Pagie, Joris van Arensbergen, Bas van Steensel. Cell 2019
40
33

Local rewiring of genome-nuclear lamina interactions by transcription.
Laura Brueckner, Peiyao A Zhao, Tom van Schaik, Christ Leemans, Jiao Sima, Daniel Peric-Hupkes, David M Gilbert, Bas van Steensel. EMBO J 2020
14
33

Quality control of inner nuclear membrane proteins by the Asi complex.
Ombretta Foresti, Victoria Rodriguez-Vaello, Charlotta Funaya, Pedro Carvalho. Science 2014
106
33


Role of the nuclear envelope in calcium signalling.
Jean-Pierre Mauger. Biol Cell 2012
19
33

Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence.
Wouter Meuleman, Daan Peric-Hupkes, Jop Kind, Jean-Bernard Beaudry, Ludo Pagie, Manolis Kellis, Marcel Reinders, Lodewyk Wessels, Bas van Steensel. Genome Res 2013
240
33

Active chromatin marks drive spatial sequestration of heterochromatin in C. elegans nuclei.
Daphne S Cabianca, Celia Muñoz-Jiménez, Véronique Kalck, Dimos Gaidatzis, Jan Padeken, Andrew Seeber, Peter Askjaer, Susan M Gasser. Nature 2019
31
33

Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation.
Daan Peric-Hupkes, Wouter Meuleman, Ludo Pagie, Sophia W M Bruggeman, Irina Solovei, Wim Brugman, Stefan Gräf, Paul Flicek, Ron M Kerkhoven, Maarten van Lohuizen,[...]. Mol Cell 2010
619
33

DNA zip codes control an ancient mechanism for gene targeting to the nuclear periphery.
Sara Ahmed, Donna G Brickner, William H Light, Ivelisse Cajigas, Michele McDonough, Alexander B Froyshteter, Tom Volpe, Jason H Brickner. Nat Cell Biol 2010
134
33


Cytoskeletal control of nuclear morphology and chromatin organization.
Nisha M Ramdas, G V Shivashankar. J Mol Biol 2015
90
33


Histones and histone modifications in perinuclear chromatin anchoring: from yeast to man.
Jennifer C Harr, Adriana Gonzalez-Sandoval, Susan M Gasser. EMBO Rep 2016
72
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.