A citation-based method for searching scientific literature

Luca Tottone, Olga Lancho, Jui-Wan Loh, Amartya Singh, Shunsuke Kimura, Juliette Roels, Anna Kuchmiy, Steven Strubbe, Matthew A Lawlor, Victoria da Silva-Diz, Shirley Luo, Stéphanie Gachet, Carlos A García-Prieto, Rico Hagelaar, Manel Esteller, Jules P P Meijerink, Jean Soulier, Tom Taghon, Pieter Van Vlierberghe, Charles G Mullighan, Hossein Khiabanian, Pedro P Rocha, Daniel Herranz. Blood Cancer Discov 2021
Times Cited: 2







List of co-cited articles
5 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


APOBEC signature mutation generates an oncogenic enhancer that drives LMO1 expression in T-ALL.
Z Li, B J Abraham, A Berezovskaya, N Farah, Y Liu, T Leon, A Fielding, S H Tan, T Sanda, A S Weintraub,[...]. Leukemia 2017
32
100

Core transcriptional regulatory circuit controlled by the TAL1 complex in human T cell acute lymphoblastic leukemia.
Takaomi Sanda, Lee N Lawton, M Inmaculada Barrasa, Zi Peng Fan, Holger Kohlhammer, Alejandro Gutierrez, Wenxue Ma, Jessica Tatarek, Yebin Ahn, Michelle A Kelliher,[...]. Cancer Cell 2012
179
100

The genetics and mechanisms of T cell acute lymphoblastic leukaemia.
Laura Belver, Adolfo Ferrando. Nat Rev Cancer 2016
182
100

Activating mutations of NOTCH1 in human T cell acute lymphoblastic leukemia.
Andrew P Weng, Adolfo A Ferrando, Woojoong Lee, John P Morris, Lewis B Silverman, Cheryll Sanchez-Irizarry, Stephen C Blacklow, A Thomas Look, Jon C Aster. Science 2004
100

Oncogene regulation. An oncogenic super-enhancer formed through somatic mutation of a noncoding intergenic element.
Marc R Mansour, Brian J Abraham, Lars Anders, Alla Berezovskaya, Alejandro Gutierrez, Adam D Durbin, Julia Etchin, Lee Lawton, Stephen E Sallan, Lewis B Silverman,[...]. Science 2014
413
100

Lymphocyte-Specific Chromatin Accessibility Pre-determines Glucocorticoid Resistance in Acute Lymphoblastic Leukemia.
Duohui Jing, Yizhou Huang, Xiaoyun Liu, Keith C S Sia, Julia C Zhang, Xiaolu Tai, Meng Wang, Cara E Toscan, Hannah McCalmont, Kathryn Evans,[...]. Cancer Cell 2018
31
50


A Myc enhancer cluster regulates normal and leukaemic haematopoietic stem cell hierarchies.
Carsten Bahr, Lisa von Paleske, Veli V Uslu, Silvia Remeseiro, Naoya Takayama, Stanley W Ng, Alex Murison, Katja Langenfeld, Massimo Petretich, Roberta Scognamiglio,[...]. Nature 2018
124
50

ARID5B as a critical downstream target of the TAL1 complex that activates the oncogenic transcriptional program and promotes T-cell leukemogenesis.
Wei Zhong Leong, Shi Hao Tan, Phuong Cao Thi Ngoc, Stella Amanda, Alice Wei Yee Yam, Wei-Siang Liau, Zhiyuan Gong, Lee N Lawton, Daniel G Tenen, Takaomi Sanda. Genes Dev 2017
28
50

Cell type-specific actions of Bcl11b in early T-lineage and group 2 innate lymphoid cells.
Hiroyuki Hosokawa, Maile Romero-Wolf, Qi Yang, Yasutaka Motomura, Ditsa Levanon, Yoram Groner, Kazuyo Moro, Tomoaki Tanaka, Ellen V Rothenberg. J Exp Med 2020
24
50


Diversity and Emerging Roles of Enhancer RNA in Regulation of Gene Expression and Cell Fate.
Preston R Arnold, Andrew D Wells, Xian C Li. Front Cell Dev Biol 2020
42
50

Spatial partitioning of the regulatory landscape of the X-inactivation centre.
Elphège P Nora, Bryan R Lajoie, Edda G Schulz, Luca Giorgetti, Ikuhiro Okamoto, Nicolas Servant, Tristan Piolot, Nynke L van Berkum, Johannes Meisig, John Sedat,[...]. Nature 2012
50

Joint single-cell DNA accessibility and protein epitope profiling reveals environmental regulation of epigenomic heterogeneity.
Xingqi Chen, Ulrike M Litzenburger, Yuning Wei, Alicia N Schep, Edward L LaGory, Hani Choudhry, Amato J Giaccia, William J Greenleaf, Howard Y Chang. Nat Commun 2018
26
50

Discovery of proteins associated with a predefined genomic locus via dCas9-APEX-mediated proximity labeling.
Samuel A Myers, Jason Wright, Ryan Peckner, Brian T Kalish, Feng Zhang, Steven A Carr. Nat Methods 2018
81
50

Non-coding Transcription Instructs Chromatin Folding and Compartmentalization to Dictate Enhancer-Promoter Communication and T Cell Fate.
Takeshi Isoda, Amanda J Moore, Zhaoren He, Vivek Chandra, Masatoshi Aida, Matthew Denholtz, Jan Piet van Hamburg, Kathleen M Fisch, Aaron N Chang, Shawn P Fahl,[...]. Cell 2017
120
50

The role of enhancers in cancer.
Inderpreet Sur, Jussi Taipale. Nat Rev Cancer 2016
167
50


Site- and allele-specific polycomb dysregulation in T-cell leukaemia.
Jean-Marc Navarro, Aurore Touzart, Lydie C Pradel, Marie Loosveld, Myriam Koubi, Romain Fenouil, Sandrine Le Noir, Muhammad Ahmad Maqbool, Ester Morgado, Claude Gregoire,[...]. Nat Commun 2015
34
50

RNA Binding to CBP Stimulates Histone Acetylation and Transcription.
Daniel A Bose, Greg Donahue, Danny Reinberg, Ramin Shiekhattar, Roberto Bonasio, Shelley L Berger. Cell 2017
166
50

Evolution of the Epigenetic Landscape in Childhood B Acute Lymphoblastic Leukemia and Its Role in Drug Resistance.
Shella Saint Fleur-Lominy, Nikki A Evensen, Teena Bhatla, Gunjan Sethia, Sonali Narang, Jun H Choi, Xiaotu Ma, Jun J Yang, Stephen Kelly, Elizabeth Raetz,[...]. Cancer Res 2020
3
50

Glucocorticoid use in acute lymphoblastic leukaemia.
Hiroto Inaba, Ching-Hon Pui. Lancet Oncol 2010
188
50

The enhancer RNA ARIEL activates the oncogenic transcriptional program in T-cell acute lymphoblastic leukemia.
Shi Hao Tan, Wei Zhong Leong, Phuong Cao Thi Ngoc, Tze King Tan, Fatima Carla Bertulfo, Mei Chee Lim, Omer An, Zhenhua Li, Allen Eng Juh Yeoh, Melissa J Fullwood,[...]. Blood 2019
23
50

Three-dimensional chromatin landscapes in T cell acute lymphoblastic leukemia.
Andreas Kloetgen, Palaniraja Thandapani, Panagiotis Ntziachristos, Yohana Ghebrechristos, Sofia Nomikou, Charalampos Lazaris, Xufeng Chen, Hai Hu, Sofia Bakogianni, Jingjing Wang,[...]. Nat Genet 2020
30
50


In Situ Capture of Chromatin Interactions by Biotinylated dCas9.
Xin Liu, Yuannyu Zhang, Yong Chen, Mushan Li, Feng Zhou, Kailong Li, Hui Cao, Min Ni, Yuxuan Liu, Zhimin Gu,[...]. Cell 2017
146
50

The Leukemogenic TCF3-HLF Complex Rewires Enhancers Driving Cellular Identity and Self-Renewal Conferring EP300 Vulnerability.
Yun Huang, Brice Mouttet, Hans-Jörg Warnatz, Thomas Risch, Fabian Rietmann, Fabian Frommelt, Quy A Ngo, Maria Pamela Dobay, Blerim Marovca, Silvia Jenni,[...]. Cancer Cell 2019
12
50

Immunogenetics. Chromatin state dynamics during blood formation.
David Lara-Astiaso, Assaf Weiner, Erika Lorenzo-Vivas, Irina Zaretsky, Diego Adhemar Jaitin, Eyal David, Hadas Keren-Shaul, Alexander Mildner, Deborah Winter, Steffen Jung,[...]. Science 2014
477
50

Combinatorial ETS1-dependent control of oncogenic NOTCH1 enhancers in T-cell leukemia.
Anna C McCarter, Giusy Della Gatta, Ashley Melnick, Erin Kim, Cher Sha, Qing Wang, Jahnavi K Nalamolu, Yiran Liu, Theresa M Keeley, Ran Yan,[...]. Blood Cancer Discov 2020
3
50

Histone replacement marks the boundaries of cis-regulatory domains.
Yoshiko Mito, Jorja G Henikoff, Steven Henikoff. Science 2007
208
50

Developmental gene networks: a triathlon on the course to T cell identity.
Mary A Yui, Ellen V Rothenberg. Nat Rev Immunol 2014
182
50

Asynchronous combinatorial action of four regulatory factors activates Bcl11b for T cell commitment.
Hao Yuan Kueh, Mary A Yui, Kenneth K H Ng, Shirley S Pease, Jingli A Zhang, Sagar S Damle, George Freedman, Sharmayne Siu, Irwin D Bernstein, Michael B Elowitz,[...]. Nat Immunol 2016
78
50

Purification of proteins associated with specific genomic Loci.
Jérôme Déjardin, Robert E Kingston. Cell 2009
349
50

Distinct and temporary-restricted epigenetic mechanisms regulate human αβ and γδ T cell development.
Juliette Roels, Anna Kuchmiy, Matthias De Decker, Steven Strubbe, Marieke Lavaert, Kai Ling Liang, Georges Leclercq, Bart Vandekerckhove, Filip Van Nieuwerburgh, Pieter Van Vlierberghe,[...]. Nat Immunol 2020
16
50


Role of SWI/SNF in acute leukemia maintenance and enhancer-mediated Myc regulation.
Junwei Shi, Warren A Whyte, Cinthya J Zepeda-Mendoza, Joseph P Milazzo, Chen Shen, Jae-Seok Roe, Jessica L Minder, Fatih Mercan, Eric Wang, Melanie A Eckersley-Maslin,[...]. Genes Dev 2013
273
50

NOTCH1-RBPJ complexes drive target gene expression through dynamic interactions with superenhancers.
Hongfang Wang, Chongzhi Zang, Len Taing, Kelly L Arnett, Yinling Joey Wong, Warren S Pear, Stephen C Blacklow, X Shirley Liu, Jon C Aster. Proc Natl Acad Sci U S A 2014
143
50

Pioneer transcription factors, chromatin dynamics, and cell fate control.
Kenneth S Zaret, Susan E Mango. Curr Opin Genet Dev 2016
196
50

Cooperative Enhancer Activation by TLX1 and STAT5 Drives Development of NUP214-ABL1/TLX1-Positive T Cell Acute Lymphoblastic Leukemia.
Marlies Vanden Bempt, Sofie Demeyer, Michaël Broux, Jolien De Bie, Simon Bornschein, Nicole Mentens, Roel Vandepoel, Ellen Geerdens, Enrico Radaelli, Beat C Bornhauser,[...]. Cancer Cell 2018
23
50

A NOTCH1-driven MYC enhancer promotes T cell development, transformation and acute lymphoblastic leukemia.
Daniel Herranz, Alberto Ambesi-Impiombato, Teresa Palomero, Stephanie A Schnell, Laura Belver, Agnieszka A Wendorff, Luyao Xu, Mireia Castillo-Martin, David Llobet-Navás, Carlos Cordon-Cardo,[...]. Nat Med 2014
233
50

Development of 2 Bromodomain and Extraterminal Inhibitors With Distinct Pharmacokinetic and Pharmacodynamic Profiles for the Treatment of Advanced Malignancies.
Gerald Falchook, Seth Rosen, Patricia LoRusso, Justin Watts, Shilpa Gupta, Catherine C Coombs, Moshe Talpaz, Razelle Kurzrock, Monica Mita, Ryan Cassaday,[...]. Clin Cancer Res 2020
20
50

Cancer-specific CTCF binding facilitates oncogenic transcriptional dysregulation.
Celestia Fang, Zhenjia Wang, Cuijuan Han, Stephanie L Safgren, Kathryn A Helmin, Emmalee R Adelman, Valentina Serafin, Giuseppe Basso, Kyle P Eagen, Alexandre Gaspar-Maia,[...]. Genome Biol 2020
11
50

Noncoding Variants Connect Enhancer Dysregulation with Nuclear Receptor Signaling in Hematopoietic Malignancies.
Kailong Li, Yuannyu Zhang, Xin Liu, Yuxuan Liu, Zhimin Gu, Hui Cao, Kathryn E Dickerson, Mingyi Chen, Weina Chen, Zhen Shao,[...]. Cancer Discov 2020
10
50

Activation of proto-oncogenes by disruption of chromosome neighborhoods.
Denes Hnisz, Abraham S Weintraub, Daniel S Day, Anne-Laure Valton, Rasmus O Bak, Charles H Li, Johanna Goldmann, Bryan R Lajoie, Zi Peng Fan, Alla A Sigova,[...]. Science 2016
469
50

3D Chromosome Regulatory Landscape of Human Pluripotent Cells.
Xiong Ji, Daniel B Dadon, Benjamin E Powell, Zi Peng Fan, Diego Borges-Rivera, Sigal Shachar, Abraham S Weintraub, Denes Hnisz, Gianluca Pegoraro, Tong Ihn Lee,[...]. Cell Stem Cell 2016
216
50

Activating RNAs associate with Mediator to enhance chromatin architecture and transcription.
Fan Lai, Ulf A Orom, Matteo Cesaroni, Malte Beringer, Dylan J Taatjes, Gerd A Blobel, Ramin Shiekhattar. Nature 2013
570
50

Chromatin accessibility and the regulatory epigenome.
Sandy L Klemm, Zohar Shipony, William J Greenleaf. Nat Rev Genet 2019
320
50

New dimension of glucocorticoids in cancer treatment.
Kai-Ti Lin, Lu-Hai Wang. Steroids 2016
100
50

Whole-genome noncoding sequence analysis in T-cell acute lymphoblastic leukemia identifies oncogene enhancer mutations.
Shaoyan Hu, Maoxiang Qian, Hui Zhang, Yu Guo, Jin Yang, Xujie Zhao, Hailong He, Jun Lu, Jian Pan, Meimei Chang,[...]. Blood 2017
19
50

Role of non-coding sequence variants in cancer.
Ekta Khurana, Yao Fu, Dimple Chakravarty, Francesca Demichelis, Mark A Rubin, Mark Gerstein. Nat Rev Genet 2016
251
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.