A citation-based method for searching scientific literature

Shibo Li, Hailong Wang, Sanaa Jehi, Jun Li, Shuo Liu, Zi Wang, Lan Truong, Takuya Chiba, Zefeng Wang, Xiaohua Wu. EMBO J 2021
Times Cited: 13







List of co-cited articles
153 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Migrating bubble during break-induced replication drives conservative DNA synthesis.
Natalie Saini, Sreejith Ramakrishnan, Rajula Elango, Sandeep Ayyar, Yu Zhang, Angela Deem, Grzegorz Ira, James E Haber, Kirill S Lobachev, Anna Malkova. Nature 2013
216
53

Break-induced replication repair of damaged forks induces genomic duplications in human cells.
Lorenzo Costantino, Sotirios K Sotiriou, Juha K Rantala, Simon Magin, Emil Mladenov, Thomas Helleday, James E Haber, George Iliakis, Olli P Kallioniemi, Thanos D Halazonetis. Science 2014
277
53

Break-induced replication and telomerase-independent telomere maintenance require Pol32.
John R Lydeard, Suvi Jain, Miyuki Yamaguchi, James E Haber. Nature 2007
342
46

RAD52 Facilitates Mitotic DNA Synthesis Following Replication Stress.
Rahul Bhowmick, Sheroy Minocherhomji, Ian D Hickson. Mol Cell 2016
184
46

Break-induced replication occurs by conservative DNA synthesis.
Roberto A Donnianni, Lorraine S Symington. Proc Natl Acad Sci U S A 2013
119
46

Pif1 helicase and Polδ promote recombination-coupled DNA synthesis via bubble migration.
Marenda A Wilson, YoungHo Kwon, Yuanyuan Xu, Woo-Hyun Chung, Peter Chi, Hengyao Niu, Ryan Mayle, Xuefeng Chen, Anna Malkova, Patrick Sung,[...]. Nature 2013
199
38


Break-induced replication is highly inaccurate.
Angela Deem, Andrea Keszthelyi, Tiffany Blackgrove, Alexandra Vayl, Barbara Coffey, Ruchi Mathur, Andrei Chabes, Anna Malkova. PLoS Biol 2011
188
38

Break-induced telomere synthesis underlies alternative telomere maintenance.
Robert L Dilley, Priyanka Verma, Nam Woo Cho, Harrison D Winters, Anne R Wondisford, Roger A Greenberg. Nature 2016
209
30

Mammalian RAD52 Functions in Break-Induced Replication Repair of Collapsed DNA Replication Forks.
Sotirios K Sotiriou, Irene Kamileri, Natalia Lugli, Konstantinos Evangelou, Caterina Da-Ré, Florian Huber, Laura Padayachy, Sebastien Tardy, Noemie L Nicati, Samia Barriot,[...]. Mol Cell 2016
159
30

DNA REPAIR. Mus81 and converging forks limit the mutagenicity of replication fork breakage.
Ryan Mayle, Ian M Campbell, Christine R Beck, Yang Yu, Marenda Wilson, Chad A Shaw, Lotte Bjergbaek, James R Lupski, Grzegorz Ira. Science 2015
125
30

Replication stress activates DNA repair synthesis in mitosis.
Sheroy Minocherhomji, Songmin Ying, Victoria A Bjerregaard, Sara Bursomanno, Aiste Aleliunaite, Wei Wu, Hocine W Mankouri, Huahao Shen, Ying Liu, Ian D Hickson. Nature 2015
293
30

Alternative lengthening of human telomeres is a conservative DNA replication process with features of break-induced replication.
Fani-Marlen Roumelioti, Sotirios K Sotiriou, Vasiliki Katsini, Maria Chiourea, Thanos D Halazonetis, Sarantis Gagos. EMBO Rep 2016
84
30

Template switching during break-induced replication.
Catherine E Smith, Bertrand Llorente, Lorraine S Symington. Nature 2007
244
30

Tracking break-induced replication shows that it stalls at roadblocks.
Liping Liu, Zhenxin Yan, Beth A Osia, Jerzy Twarowski, Luyang Sun, Juraj Kramara, Rosemary S Lee, Sandeep Kumar, Rajula Elango, Hanzeng Li,[...]. Nature 2021
14
30

Interstitial telomere sequences disrupt break-induced replication and drive formation of ectopic telomeres.
Elizabeth A Stivison, Kati J Young, Lorraine S Symington. Nucleic Acids Res 2020
6
66

High-resolution mapping of mitotic DNA synthesis regions and common fragile sites in the human genome through direct sequencing.
Morgane Macheret, Rahul Bhowmick, Katarzyna Sobkowiak, Laura Padayachy, Jonathan Mailler, Ian D Hickson, Thanos D Halazonetis. Cell Res 2020
26
30

Mechanisms restraining break-induced replication at two-ended DNA double-strand breaks.
Nhung Pham, Zhenxin Yan, Yang Yu, Mosammat Faria Afreen, Anna Malkova, James E Haber, Grzegorz Ira. EMBO J 2021
10
40

RTEL1 suppresses G-quadruplex-associated R-loops at difficult-to-replicate loci in the human genome.
Wei Wu, Rahul Bhowmick, Ivan Vogel, Özgün Özer, Fiorella Ghisays, Roshan S Thakur, Esther Sanchez de Leon, Philipp H Richter, Liqun Ren, John H Petrini,[...]. Nat Struct Mol Biol 2020
29
30


The role of break-induced replication in large-scale expansions of (CAG)n/(CTG)n repeats.
Jane C Kim, Samantha T Harris, Teresa Dinter, Kartik A Shah, Sergei M Mirkin. Nat Struct Mol Biol 2017
50
23

The concerted roles of FANCM and Rad52 in the protection of common fragile sites.
Hailong Wang, Shibo Li, Joshua Oaks, Jianping Ren, Lei Li, Xiaohua Wu. Nat Commun 2018
31
23


Break-induced replication: what is it and what is it for?
Bertrand Llorente, Catherine E Smith, Lorraine S Symington. Cell Cycle 2008
215
23

Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast.
Grzegorz Ira, Anna Malkova, Giordano Liberi, Marco Foiani, James E Haber. Cell 2003
451
23

Mechanism and regulation of DNA end resection in eukaryotes.
Lorraine S Symington. Crit Rev Biochem Mol Biol 2016
204
23

Chromosome rearrangements via template switching between diverged repeated sequences.
Ranjith P Anand, Olga Tsaponina, Patricia W Greenwell, Cheng-Sheng Lee, Wei Du, Thomas D Petes, James E Haber. Genes Dev 2014
70
23

Dynamic Processing of Displacement Loops during Recombinational DNA Repair.
Aurèle Piazza, Shanaya Shital Shah, William Douglass Wright, Steven K Gore, Romain Koszul, Wolf-Dietrich Heyer. Mol Cell 2019
44
23

Mechanisms and regulation of mitotic recombination in Saccharomyces cerevisiae.
Lorraine S Symington, Rodney Rothstein, Michael Lisby. Genetics 2014
207
23

Patterns of somatic structural variation in human cancer genomes.
Yilong Li, Nicola D Roberts, Jeremiah A Wala, Ofer Shapira, Steven E Schumacher, Kiran Kumar, Ekta Khurana, Sebastian Waszak, Jan O Korbel, James E Haber,[...]. Nature 2020
151
23

Replication-Coupled DNA Repair.
David Cortez. Mol Cell 2019
73
23


Repair of DNA Breaks by Break-Induced Replication.
Z W Kockler, B Osia, R Lee, K Musmaker, A Malkova. Annu Rev Biochem 2021
8
37

Homologous recombination and the repair of DNA double-strand breaks.
William Douglass Wright, Shanaya Shital Shah, Wolf-Dietrich Heyer. J Biol Chem 2018
222
23

The Fanconi Anemia Pathway in Cancer.
Joshi Niraj, Anniina Färkkilä, Alan D D'Andrea. Annu Rev Cancer Biol 2019
128
23

Differential regulation of short- and long-tract gene conversion between sister chromatids by Rad51C.
Ganesh Nagaraju, Shobu Odate, Anyong Xie, Ralph Scully. Mol Cell Biol 2006
49
15

RAD51-dependent break-induced replication in yeast.
Allison P Davis, Lorraine S Symington. Mol Cell Biol 2004
139
15

Gene conversion tracts from double-strand break repair in mammalian cells.
B Elliott, C Richardson, J Winderbaum, J A Nickoloff, M Jasin. Mol Cell Biol 1998
238
15

BRCA1 and CtIP suppress long-tract gene conversion between sister chromatids.
Gurushankar Chandramouly, Amy Kwok, Bin Huang, Nicholas A Willis, Anyong Xie, Ralph Scully. Nat Commun 2013
45
15

Exploiting oncogene-induced replicative stress for the selective killing of Myc-driven tumors.
Matilde Murga, Stefano Campaner, Andres J Lopez-Contreras, Luis I Toledo, Rebeca Soria, Maria F Montaña, Luana D' Artista, Thomas Schleker, Carmen Guerra, Elena Garcia,[...]. Nat Struct Mol Biol 2011
251
15

Break-induced DNA replication.
Ranjith P Anand, Susan T Lovett, James E Haber. Cold Spring Harb Perspect Biol 2013
147
15


Break-induced replication is a source of mutation clusters underlying kataegis.
Cynthia J Sakofsky, Steven A Roberts, Ewa Malc, Piotr A Mieczkowski, Michael A Resnick, Dmitry A Gordenin, Anna Malkova. Cell Rep 2014
106
15

CtIP maintains stability at common fragile sites and inverted repeats by end resection-independent endonuclease activity.
Hailong Wang, Yongjiang Li, Lan N Truong, Linda Z Shi, Patty Yi-Hwa Hwang, Jing He, Johnny Do, Michael Jeffrey Cho, Hongzhi Li, Alejandro Negrete,[...]. Mol Cell 2014
102
15

Break-induced replication: functions and molecular mechanism.
Anna Malkova, Grzegorz Ira. Curr Opin Genet Dev 2013
116
15

Oncogenic stress sensitizes murine cancers to hypomorphic suppression of ATR.
David W Schoppy, Ryan L Ragland, Oren Gilad, Nishita Shastri, Ashley A Peters, Matilde Murga, Oscar Fernandez-Capetillo, J Alan Diehl, Eric J Brown. J Clin Invest 2012
121
15

G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
707
15


Repair of strand breaks by homologous recombination.
Maria Jasin, Rodney Rothstein. Cold Spring Harb Perspect Biol 2013
465
15

RAD51-dependent break-induced replication differs in kinetics and checkpoint responses from RAD51-mediated gene conversion.
Anna Malkova, Maria L Naylor, Miyuki Yamaguchi, Grzegorz Ira, James E Haber. Mol Cell Biol 2005
128
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.