A citation-based method for searching scientific literature

Karolin Heinze, Matthias Rengsberger, Mieczyslaw Gajda, Lars Jansen, Linea Osmers, Leticia Oliveira-Ferrer, Barbara Schmalfeldt, Matthias Dürst, Norman Häfner, Ingo B Runnebaum. Clin Epigenetics 2021
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Association of promoter methylation of RUNX3 gene with the development of esophageal cancer: a meta analysis.
Yi Wang, Xiuguang Qin, Jieqing Wu, Bo Qi, Yipeng Tao, Wenju Wang, Fulei Liu, Hanchen Li, Baosheng Zhao. PLoS One 2014
17
100

The role of the Runx transcription factors in thymocyte differentiation and in homeostasis of naive T cells.
Takeshi Egawa, Robert E Tillman, Yoshinori Naoe, Ichiro Taniuchi, Dan R Littman. J Exp Med 2007
209
100

RUNX family: Regulation and diversification of roles through interacting proteins.
Linda Shyue Huey Chuang, Kosei Ito, Yoshiaki Ito. Int J Cancer 2013
117
100

Identification and validation of genes with expression patterns inverse to multiple metastasis suppressor genes in breast cancer cell lines.
Natascia Marino, Joshua W Collins, Changyu Shen, Natasha J Caplen, Anand S Merchant, Yesim Gökmen-Polar, Chirayu P Goswami, Takashi Hoshino, Yongzhen Qian, George W Sledge,[...]. Clin Exp Metastasis 2014
18
100

Trimmomatic: a flexible trimmer for Illumina sequence data.
Anthony M Bolger, Marc Lohse, Bjoern Usadel. Bioinformatics 2014
100

Role of RUNX3 in suppressing metastasis and angiogenesis of human prostate cancer.
Feifei Chen, Meng Wang, Jin Bai, Qinghua Liu, Yaguang Xi, Wang Li, Junnian Zheng. PLoS One 2014
32
100

Probing structure-function relationships in missense variants in the carboxy-terminal region of BRCA1.
Renato S Carvalho, Renata B V Abreu, Aneliya Velkova, Sylvia Marsillac, Renato S Rodarte, Guilherme Suarez-Kurtz, Edwin S Iversen, Alvaro N A Monteiro, Marcelo A Carvalho. PLoS One 2014
4
100


REVIGO summarizes and visualizes long lists of gene ontology terms.
Fran Supek, Matko Bošnjak, Nives Škunca, Tomislav Šmuc. PLoS One 2011
100

Cancer Statistics, 2017.
Rebecca L Siegel, Kimberly D Miller, Ahmedin Jemal. CA Cancer J Clin 2017
100

STRING v11: protein-protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets.
Damian Szklarczyk, Annika L Gable, David Lyon, Alexander Junge, Stefan Wyder, Jaime Huerta-Cepas, Milan Simonovic, Nadezhda T Doncheva, John H Morris, Peer Bork,[...]. Nucleic Acids Res 2019
100

The temporal dynamics of chromosome instability in ovarian cancer cell lines and primary patient samples.
Signe Penner-Goeke, Zelda Lichtensztejn, Megan Neufeld, Jennifer L Ali, Alon D Altman, Mark W Nachtigal, Kirk J McManus. PLoS Genet 2017
22
100

The quest for the 1p36 tumor suppressor.
Anindya Bagchi, Alea A Mills. Cancer Res 2008
150
100

Ensembl 2019.
Fiona Cunningham, Premanand Achuthan, Wasiu Akanni, James Allen, M Ridwan Amode, Irina M Armean, Ruth Bennett, Jyothish Bhai, Konstantinos Billis, Sanjay Boddu,[...]. Nucleic Acids Res 2019
387
100

Evolving Therapeutic Strategies to Exploit Chromosome Instability in Cancer.
Laura L Thompson, Lucile M-P Jeusset, Chloe C Lepage, Kirk J McManus. Cancers (Basel) 2017
28
100

RUNX3 protein is overexpressed in human basal cell carcinomas.
M Salto-Tellez, B K Peh, K Ito, S H Tan, P Y Chong, H C Han, K Tada, W Y Ong, R Soong, D C Voon,[...]. Oncogene 2006
63
100

A collagen-remodeling gene signature regulated by TGF-β signaling is associated with metastasis and poor survival in serous ovarian cancer.
Dong-Joo Cheon, Yunguang Tong, Myung-Shin Sim, Judy Dering, Dror Berel, Xiaojiang Cui, Jenny Lester, Jessica A Beach, Mourad Tighiouart, Ann E Walts,[...]. Clin Cancer Res 2014
192
100

RUNX3 gene methylation in epithelial ovarian cancer tissues and ovarian cancer cell lines.
Shiqian Zhang, Lingxia Wei, Aifeng Zhang, Linlin Zhang, Hao Yu. OMICS 2009
17
100


PDE5 expression in human thyroid tumors and effects of PDE5 inhibitors on growth and migration of cancer cells.
Marialuisa Sponziello, Antonella Verrienti, Francesca Rosignolo, Roberta Francesca De Rose, Valeria Pecce, Valentina Maggisano, Cosimo Durante, Stefania Bulotta, Giuseppe Damante, Laura Giacomelli,[...]. Endocrine 2015
36
100

Runx3 interacts with DNA repair protein Ku70.
Yasuo Tanaka, Jun Imamura, Fumihiko Kanai, Tohru Ichimura, Toshiaki Isobe, Manabu Koike, Yotaro Kudo, Keisuke Tateishi, Tsuneo Ikenoue, Hideaki Ijichi,[...]. Exp Cell Res 2007
12
100

RUNX3 Epigenetic Inactivation Is Associated With Estrogen Receptor Positive Breast Cancer.
Hui Liu, Zhantao Yan, Qianqian Yin, Kai Cao, Yu Wei, Jaime Rodriguez-Canales, Dongshen Ma, Yongping Wu. J Histochem Cytochem 2018
6
100

Ovarian cancer cell line panel (OCCP): clinical importance of in vitro morphological subtypes.
Corine M Beaufort, Jean C A Helmijr, Anna M Piskorz, Marlous Hoogstraat, Kirsten Ruigrok-Ritstier, Nicolle Besselink, Muhammed Murtaza, Wilfred F J van IJcken, Anouk A J Heine, Marcel Smid,[...]. PLoS One 2014
198
100

RUNX3 contributes to carboplatin resistance in epithelial ovarian cancer cells.
Samir H Barghout, Nubia Zepeda, Krista Vincent, Abul K Azad, Zhihua Xu, Christine Yang, Helen Steed, Lynne-Marie Postovit, YangXin Fu. Gynecol Oncol 2015
21
100

Molecular pathology of RUNX3 in human carcinogenesis.
Manish Mani Subramaniam, Jason Yongsheng Chan, Khay Guan Yeoh, Timothy Quek, Kosei Ito, Manuel Salto-Tellez. Biochim Biophys Acta 2009
95
100

E2F1 promotes the recruitment of DNA repair factors to sites of DNA double-strand breaks.
Jie Chen, Feng Zhu, Regina L Weaks, Anup K Biswas, Ruifeng Guo, Yanjie Li, David G Johnson. Cell Cycle 2011
54
100

Abnormal liver differentiation and excessive angiogenesis in mice lacking Runx3.
Jong-Min Lee, Dong-Joon Lee, Suk-Chul Bae, Han-Sung Jung. Histochem Cell Biol 2013
8
100

Runx3 transcription factor regulates ovarian functions and ovulation in female mice.
Fumiya Ojima, Yuka Saito, Yukiko Tsuchiya, Daichi Kayo, Syusuke Taniuchi, Maho Ogoshi, Hiroshi Fukamachi, Sakae Takeuchi, Sumio Takahashi. J Reprod Dev 2016
4
100

Non-random Mis-segregation of Human Chromosomes.
Joseph Thomas Worrall, Naoka Tamura, Alice Mazzagatti, Nadeem Shaikh, Tineke van Lingen, Bjorn Bakker, Diana Carolina Johanna Spierings, Elina Vladimirou, Floris Foijer, Sarah Elizabeth McClelland. Cell Rep 2018
28
100


RUNX3 has an oncogenic role in head and neck cancer.
Takaaki Tsunematsu, Yasusei Kudo, Shinji Iizuka, Ikuko Ogawa, Tsuyoshi Fujita, Hidemi Kurihara, Yoshimitsu Abiko, Takashi Takata. PLoS One 2009
61
100

Characterizing the prevalence of chromosome instability in interval colorectal cancer.
A L Cisyk, S Penner-Goeke, Z Lichtensztejn, Z Nugent, R H Wightman, H Singh, K J McManus. Neoplasia 2015
19
100

Studying the Role of AMPK in Angiogenesis.
Katrin Spengler, Silke Große, Nderim Kryeziu, Anne Knierim, Regine Heller. Methods Mol Biol 2018
3
100

MultiQC: summarize analysis results for multiple tools and samples in a single report.
Philip Ewels, Måns Magnusson, Sverker Lundin, Max Käller. Bioinformatics 2016
989
100

WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIs.
Yuxing Liao, Jing Wang, Eric J Jaehnig, Zhiao Shi, Bing Zhang. Nucleic Acids Res 2019
489
100

HISAT: a fast spliced aligner with low memory requirements.
Daehwan Kim, Ben Langmead, Steven L Salzberg. Nat Methods 2015
100

Functional Analyses of RUNX3 and CaMKIINα in Ovarian Cancer Cell Lines Reveal Tumor-Suppressive Functions for CaMKIINα and Dichotomous Roles for RUNX3 Transcript Variants.
Karolin Heinze, Daniel Kritsch, Alexander S Mosig, Matthias Dürst, Norman Häfner, Ingo B Runnebaum. Int J Mol Sci 2018
5
100

Tribbles 2 mediates cisplatin sensitivity and DNA damage response in epithelial ovarian cancer.
Daniel Kritsch, Franziska Hoffmann, Daniel Steinbach, Lars Jansen, Stella Mary Photini, Mieczyslaw Gajda, Alexander S Mosig, Jürgen Sonnemann, Sven Peters, Margarita Melnikova,[...]. Int J Cancer 2017
19
100

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists.
Da Wei Huang, Brad T Sherman, Richard A Lempicki. Nucleic Acids Res 2009
100

RUNX3 inhibits the expression of vascular endothelial growth factor and reduces the angiogenesis, growth, and metastasis of human gastric cancer.
Zhihai Peng, Daoyan Wei, Liwei Wang, Huamei Tang, Jun Zhang, Xiangdong Le, Zhiliang Jia, Qiang Li, Keping Xie. Clin Cancer Res 2006
61
100

Rethinking ovarian cancer: recommendations for improving outcomes.
Sebastian Vaughan, Jermaine I Coward, Robert C Bast, Andy Berchuck, Jonathan S Berek, James D Brenton, George Coukos, Christopher C Crum, Ronny Drapkin, Dariush Etemadmoghadam,[...]. Nat Rev Cancer 2011
792
100

Context-dependent activation of Wnt signaling by tumor suppressor RUNX3 in gastric cancer cells.
Xiaoli Ju, Tomo-O Ishikawa, Kazuhito Naka, Kosei Ito, Yoshiaki Ito, Masanobu Oshima. Cancer Sci 2014
25
100

Structure and regulated expression of mammalian RUNX genes.
Ditsa Levanon, Yoram Groner. Oncogene 2004
197
100


Methylation of RUNX3 in various types of human cancers and premalignant stages of gastric carcinoma.
Tai Young Kim, Hyeon Joo Lee, Kyu Sang Hwang, Minjin Lee, Jae Won Kim, Yung-Jue Bang, Gyeong Hoon Kang. Lab Invest 2004
174
100


ReportingTools: an automated result processing and presentation toolkit for high-throughput genomic analyses.
Melanie A Huntley, Jessica L Larson, Christina Chaivorapol, Gabriel Becker, Michael Lawrence, Jason A Hackney, Joshua S Kaminker. Bioinformatics 2013
16
100

Type-specific cell line models for type-specific ovarian cancer research.
Michael S Anglesio, Kimberly C Wiegand, Nataliya Melnyk, Christine Chow, Clara Salamanca, Leah M Prentice, Janine Senz, Winnie Yang, Monique A Spillman, Dawn R Cochrane,[...]. PLoS One 2013
155
100

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data.
Evguenia Kopylova, Laurent Noé, Hélène Touzet. Bioinformatics 2012
841
100

New hypothesis on pathogenesis of ovarian cancer lead to future tailored approaches.
P Rescigno, I Cerillo, R Ruocco, C Condello, S De Placido, M Pensabene. Biomed Res Int 2013
16
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.