A citation-based method for searching scientific literature

Riya Bhattacharya, Kamal Dev, Anuradha Sourirajan. J Virol Methods 2021
Times Cited: 4







List of co-cited articles
3 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved α-ketoamide inhibitors.
Linlin Zhang, Daizong Lin, Xinyuanyuan Sun, Ute Curth, Christian Drosten, Lucie Sauerhering, Stephan Becker, Katharina Rox, Rolf Hilgenfeld. Science 2020
50

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor.
Markus Hoffmann, Hannah Kleine-Weber, Simon Schroeder, Nadine Krüger, Tanja Herrler, Sandra Erichsen, Tobias S Schiergens, Georg Herrler, Nai-Huei Wu, Andreas Nitsche,[...]. Cell 2020
50

Andrographolide and its fluorescent derivative inhibit the main proteases of 2019-nCoV and SARS-CoV through covalent linkage.
Tzu-Hau Shi, Yi-Long Huang, Chiao-Che Chen, Wen-Chieh Pi, Yu-Ling Hsu, Lee-Chiang Lo, Wei-Yi Chen, Shu-Ling Fu, Chao-Hsiung Lin. Biochem Biophys Res Commun 2020
20
50

A soluble flavonoid-glycoside, alphaG-rutin, is absorbed as glycosides in the isolated gastric and intestinal mucosa.
Megumi Matsumoto, Noriko Matsukawa, Hitoshi Mineo, Hideyuki Chiji, Hiroshi Hara. Biosci Biotechnol Biochem 2004
16
25

Rutin, a Quercetin Glycoside, Restores Chemosensitivity in Human Breast Cancer Cells.
Marcello Iriti, Robert Kubina, Andrea Cochis, Rita Sorrentino, Elena M Varoni, Agata Kabała-Dzik, Barbara Azzimonti, Arkadiusz Dziedzic, Lia Rimondini, Robert D Wojtyczka. Phytother Res 2017
57
25

Quercetin and its derivative Q2 modulate chromatin dynamics in adipogenesis and Q2 prevents obesity and metabolic disorders in rats.
Immacolata Cristina Nettore, Carmine Rocca, Giuseppina Mancino, Luigi Albano, Daniela Amelio, Fedora Grande, Francesco Puoci, Teresa Pasqua, Silvio Desiderio, Rosa Mazza,[...]. J Nutr Biochem 2019
15
25

SARS-CoV-2 Main Protease: A Molecular Dynamics Study.
Dimas Suárez, Natalia Díaz. J Chem Inf Model 2020
41
25


Redox- and Ligand Binding-Dependent Conformational Ensembles in the Human Apoptosis-Inducing Factor Regulate Its Pro-Life and Cell Death Functions.
Raquel Villanueva, Silvia Romero-Tamayo, Ruben Laplaza, Juan Martínez-Olivan, Adrián Velázquez-Campoy, Javier Sancho, Patricia Ferreira, Milagros Medina. Antioxid Redox Signal 2019
7
25

Cytotoxicity of flavonoids toward cultured normal human cells.
Mitsuyoshi Matsuo, Naoko Sasaki, Kotaro Saga, Takao Kaneko. Biol Pharm Bull 2005
127
25

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
25

In silico studies evidenced the role of structurally diverse plant secondary metabolites in reducing SARS-CoV-2 pathogenesis.
Hariprasad Puttaswamy, Hittanahallikoppal Gajendramurthy Gowtham, Monu Dinesh Ojha, Ajay Yadav, Gourav Choudhir, Vasantharaja Raguraman, Bhani Kongkham, Koushalya Selvaraju, Shazia Shareef, Priyanka Gehlot,[...]. Sci Rep 2020
16
25

Intrinsically disordered chromatin protein NUPR1 binds to the C-terminal region of Polycomb RING1B.
Patricia Santofimia-Castaño, Bruno Rizzuti, Ángel L Pey, Philippe Soubeyran, Miguel Vidal, Raúl Urrutia, Juan L Iovanna, José L Neira. Proc Natl Acad Sci U S A 2017
25
25

CASTp 3.0: computed atlas of surface topography of proteins.
Wei Tian, Chang Chen, Xue Lei, Jieling Zhao, Jie Liang. Nucleic Acids Res 2018
392
25

Identification of novel drug scaffolds for inhibition of SARS-CoV 3-Chymotrypsin-like protease using virtual and high-throughput screenings.
Hyun Lee, Anuradha Mittal, Kavankumar Patel, Joseph L Gatuz, Lena Truong, Jaime Torres, Debbie C Mulhearn, Michael E Johnson. Bioorg Med Chem 2014
29
25

Dual inhibition of SARS-CoV-2 spike and main protease through a repurposed drug, rutin.
Anchala Kumari, Vikrant Singh Rajput, Priya Nagpal, Himanshi Kukrety, Sonam Grover, Abhinav Grover. J Biomol Struct Dyn 2020
7
25

Identifying potential novel drugs against Helicobacter pylori by targeting the essential response regulator HsrA.
Andrés González, Sandra Salillas, Adrián Velázquez-Campoy, Vladimir Espinosa Angarica, María F Fillat, Javier Sancho, Ángel Lanas. Sci Rep 2019
17
25


A Comprehensive Summary of the Knowledge on COVID-19 Treatment.
Yu Peng, Hongxun Tao, Senthil Kumaran Satyanarayanan, Kunlin Jin, Huanxing Su. Aging Dis 2021
8
25

Computational Determination of Potential Multiprotein Targeting Natural Compounds for Rational Drug Design Against SARS-COV-2.
Ziyad Tariq Muhseen, Alaa R Hameed, Halah M H Al-Hasani, Sajjad Ahmad, Guanglin Li. Molecules 2021
8
25

Characteristics of flavonoids as potent MERS-CoV 3C-like protease inhibitors.
Seri Jo, Hyojin Kim, Suwon Kim, Dong Hae Shin, Mi-Sun Kim. Chem Biol Drug Des 2019
93
25

Determinants of the pKa values of ionizable residues in an intrinsically disordered protein.
José L Neira, Bruno Rizzuti, Juan L Iovanna. Arch Biochem Biophys 2016
27
25


Allosteric inhibitors of the NS3 protease from the hepatitis C virus.
Olga Abian, Sonia Vega, Javier Sancho, Adrian Velazquez-Campoy. PLoS One 2013
20
25

Current Updates on Naturally Occurring Compounds Recognizing SARS-CoV-2 Druggable Targets.
Isabella Romeo, Francesco Mesiti, Antonio Lupia, Stefano Alcaro. Molecules 2021
9
25

Drug binding dynamics of the dimeric SARS-CoV-2 main protease, determined by molecular dynamics simulation.
Teruhisa S Komatsu, Noriaki Okimoto, Yohei M Koyama, Yoshinori Hirano, Gentaro Morimoto, Yousuke Ohno, Makoto Taiji. Sci Rep 2020
17
25



Binding interaction of quercetin-3-beta-galactoside and its synthetic derivatives with SARS-CoV 3CL(pro): structure-activity relationship studies reveal salient pharmacophore features.
Lili Chen, Jian Li, Cheng Luo, Hong Liu, Weijun Xu, Gang Chen, Oi Wah Liew, Weiliang Zhu, Chum Mok Puah, Xu Shen,[...]. Bioorg Med Chem 2006
123
25

Treatment of severe acute respiratory syndrome (SARS), Middle East respiratory syndrome (MERS), and coronavirus disease 2019 (COVID-19): a systematic review of in vitro, in vivo, and clinical trials.
Young Joo Han, Keum Hwa Lee, Sojung Yoon, Seoung Wan Nam, Seohyun Ryu, Dawon Seong, Jae Seok Kim, Jun Young Lee, Jae Won Yang, Jinhee Lee,[...]. Theranostics 2021
9
25

Identification of a Drug Targeting an Intrinsically Disordered Protein Involved in Pancreatic Adenocarcinoma.
José L Neira, Jennifer Bintz, María Arruebo, Bruno Rizzuti, Thomas Bonacci, Sonia Vega, Angel Lanas, Adrián Velázquez-Campoy, Juan L Iovanna, Olga Abián. Sci Rep 2017
64
25

Crowdsourcing drug discovery for pandemics.
John Chodera, Alpha A Lee, Nir London, Frank von Delft. Nat Chem 2020
42
25

Improved side-chain torsion potentials for the Amber ff99SB protein force field.
Kresten Lindorff-Larsen, Stefano Piana, Kim Palmo, Paul Maragakis, John L Klepeis, Ron O Dror, David E Shaw. Proteins 2010
25

Crystal structure of human prostaglandin F synthase (AKR1C3).
Junichi Komoto, Taro Yamada, Kikuko Watanabe, Fusao Takusagawa. Biochemistry 2004
75
25

New insights for the use of quercetin analogs in cancer treatment.
Domenico Iacopetta, Fedora Grande, Anna Caruso, Roberta Alessandra Mordocco, Maria Rosaria Plutino, Luca Scrivano, Jessica Ceramella, Noemi Muià, Carmela Saturnino, Francesco Puoci,[...]. Future Med Chem 2017
27
25

Development and testing of a general amber force field.
Junmei Wang, Romain M Wolf, James W Caldwell, Peter A Kollman, David A Case. J Comput Chem 2004
25

Inhibition of Pig Phosphoenolpyruvate Carboxykinase Isoenzymes by 3-Mercaptopicolinic Acid and Novel Inhibitors.
Jorge Hidalgo, Pedro Latorre, José Alberto Carrodeguas, Adrián Velázquez-Campoy, Javier Sancho, Pascual López-Buesa. PLoS One 2016
6
25

WHO Declares COVID-19 a Pandemic.
Domenico Cucinotta, Maurizio Vanelli. Acta Biomed 2020
25

Ligand-based design identifies a potent NUPR1 inhibitor exerting anticancer activity via necroptosis.
Patricia Santofimia-Castaño, Yi Xia, Wenjun Lan, Zhengwei Zhou, Can Huang, Ling Peng, Philippe Soubeyran, Adrián Velázquez-Campoy, Olga Abián, Bruno Rizzuti,[...]. J Clin Invest 2019
39
25

Discovery of Potential Flavonoid Inhibitors Against COVID-19 3CL Proteinase Based on Virtual Screening Strategy.
Zhongren Xu, Lixiang Yang, Xinghao Zhang, Qiling Zhang, Zhibin Yang, Yuanhao Liu, Shuang Wei, Wukun Liu. Front Mol Biosci 2020
19
25




Molecular docking, validation, dynamics simulations, and pharmacokinetic prediction of natural compounds against the SARS-CoV-2 main-protease.
Shivanika C, Deepak Kumar S, Venkataraghavan Ragunathan, Pawan Tiwari, Sumitha A, Brindha Devi P. J Biomol Struct Dyn 2020
22
25


Demographic Characteristics of Persons Vaccinated During the First Month of the COVID-19 Vaccination Program - United States, December 14, 2020-January 14, 2021.
Elizabeth M Painter, Emily N Ussery, Anita Patel, Michelle M Hughes, Elizabeth R Zell, Danielle L Moulia, Lynn Gibbs Scharf, Michael Lynch, Matthew D Ritchey, Robin L Toblin,[...]. MMWR Morb Mortal Wkly Rep 2021
46
25


Flavonoid-mediated inhibition of SARS coronavirus 3C-like protease expressed in Pichia pastoris.
Thi Thanh Hanh Nguyen, Hye-Jin Woo, Hee-Kyoung Kang, Van Dao Nguyen, Young-Min Kim, Do-Won Kim, Sul-Ah Ahn, Yongmei Xia, Doman Kim. Biotechnol Lett 2012
103
25

Effects of rutin and quercetin on monooxygenase activities in experimental influenza virus infection.
Varban M Savov, Angel S Galabov, Lyubka P Tantcheva, Milka M Mileva, Elitsa L Pavlova, Emilia S Stoeva, Ana A Braykova. Exp Toxicol Pathol 2006
30
25

Structural stability of SARS-CoV-2 3CLpro and identification of quercetin as an inhibitor by experimental screening.
Olga Abian, David Ortega-Alarcon, Ana Jimenez-Alesanco, Laura Ceballos-Laita, Sonia Vega, Hugh T Reyburn, Bruno Rizzuti, Adrian Velazquez-Campoy. Int J Biol Macromol 2020
70
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.