A citation-based method for searching scientific literature


List of co-cited articles
16 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


ATP Controls the Aggregation of Aβ16-22 Peptides.
Saikat Pal, Sandip Paul. J Phys Chem B 2020
23
100

VMD: visual molecular dynamics.
W Humphrey, A Dalke, K Schulten. J Mol Graph 1996
100

PACKMOL: a package for building initial configurations for molecular dynamics simulations.
L Martínez, R Andrade, E G Birgin, J M Martínez. J Comput Chem 2009
100


Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis.
Phuong H Nguyen, Ayyalusamy Ramamoorthy, Bikash R Sahoo, Jie Zheng, Peter Faller, John E Straub, Laura Dominguez, Joan-Emma Shea, Nikolay V Dokholyan, Alfonso De Simone,[...]. Chem Rev 2021
131
100


ff14SB: Improving the Accuracy of Protein Side Chain and Backbone Parameters from ff99SB.
James A Maier, Carmenza Martinez, Koushik Kasavajhala, Lauren Wickstrom, Kevin E Hauser, Carlos Simmerling. J Chem Theory Comput 2015
100




Different Force Fields Give Rise to Different Amyloid Aggregation Pathways in Molecular Dynamics Simulations.
Suman Samantray, Feng Yin, Batuhan Kav, Birgit Strodel. J Chem Inf Model 2020
34
100




Trimethylamine N-oxide Counteracts Urea Denaturation by Inhibiting Protein-Urea Preferential Interaction.
Pritam Ganguly, Pablo Boserman, Nico F A van der Vegt, Joan-Emma Shea. J Am Chem Soc 2018
62
100


Protein folding and misfolding.
Christopher M Dobson. Nature 2003
50


A Hot-Segment-Based Approach for the Design of Cross-Amyloid Interaction Surface Mimics as Inhibitors of Amyloid Self-Assembly.
Erika Andreetto, Eleni Malideli, Li-Mei Yan, Michael Kracklauer, Karine Farbiarz, Marianna Tatarek-Nossol, Gerhard Rammes, Elke Prade, Tatjana Neumüller, Andrea Caporale,[...]. Angew Chem Int Ed Engl 2015
40
50


Cryo-EM structure of islet amyloid polypeptide fibrils reveals similarities with amyloid-β fibrils.
Christine Röder, Tatsiana Kupreichyk, Lothar Gremer, Luisa U Schäfer, Karunakar R Pothula, Raimond B G Ravelli, Dieter Willbold, Wolfgang Hoyer, Gunnar F Schröder. Nat Struct Mol Biol 2020
61
50



Validation of a novel molecular dynamics simulation approach for lipophilic drug incorporation into polymer micelles.
Aliya O Kasimova, Giovanni M Pavan, Andrea Danani, Karine Mondon, Andrea Cristiani, Leonardo Scapozza, Robert Gurny, Michael Möller. J Phys Chem B 2012
49
50

Conformationally restricted short peptides inhibit human islet amyloid polypeptide (hIAPP) fibrillization.
Aseem Mishra, Anurag Misra, T Sri Vaishnavi, Chaitanya Thota, Madhvi Gupta, Suryanarayanarao Ramakumar, Virander Singh Chauhan. Chem Commun (Camb) 2013
38
50

The Inhibitory Effect of Hydroxylated Carbon Nanotubes on the Aggregation of Human Islet Amyloid Polypeptide Revealed by a Combined Computational and Experimental Study.
Yuxiang Mo, Sayanti Brahmachari, Jiangtao Lei, Sharon Gilead, Yiming Tang, Ehud Gazit, Guanghong Wei. ACS Chem Neurosci 2018
27
50

Selection of D-amino-acid peptides that bind to Alzheimer's disease amyloid peptide abeta1-42 by mirror image phage display.
Katja Wiesehan, Katrin Buder, Reinhold P Linke, Stephan Patt, Matthias Stoldt, Eberhard Unger, Bettina Schmitt, Enrico Bucci, Dieter Willbold. Chembiochem 2003
116
50

Tanshinones inhibit hIAPP aggregation, disaggregate preformed hIAPP fibrils, and protect cultured cells.
Baiping Ren, Yonglan Liu, Yanxian Zhang, Mingzhen Zhang, Yan Sun, Guizhao Liang, Jianxiong Xu, Jie Zheng. J Mater Chem B 2018
38
50

Computational insights into the inhibition and destabilization of morin on the oligomer of full-length human islet amyloid polypeptide.
Qianqian Wang, Shuangyan Zhou, Wei Wei, Xiaojun Yao, Huanxiang Liu, Zhide Hu. Phys Chem Chem Phys 2015
16
50


Introduction and Fundamentals of Human Islet Amyloid Polypeptide Inhibitors.
Yijing Tang, Dong Zhang, Yanxian Zhang, Yonglan Liu, Xiong Gong, Yung Chang, Baiping Ren, Jie Zheng. ACS Appl Bio Mater 2020
5
50

Rationally designed, nontoxic, nonamyloidogenic analogues of human islet amyloid polypeptide with improved solubility.
Hui Wang, Andisheh Abedini, Bela Ruzsicska, Daniel P Raleigh. Biochemistry 2014
29
50


Oral treatment with the d-enantiomeric peptide D3 improves the pathology and behavior of Alzheimer's Disease transgenic mice.
Susanne Aileen Funke, Thomas van Groen, Inga Kadish, Dirk Bartnik, Luitgard Nagel-Steger, Oleksandr Brener, Torsten Sehl, Renu Batra-Safferling, Christine Moriscot, Guy Schoehn,[...]. ACS Chem Neurosci 2010
83
50



Modeling the interface between islet amyloid polypeptide and insulin-based aggregation inhibitors: correlation to aggregation kinetics and membrane damage.
Hector Figueroa, Durgaprasad Peddi, Joshua M Osborne, Brenan M Wilson, Ranadheer Reddy Pesaru, Balakrishna Kurva, Swathi Ramaraju, Maria C Milletti, Deborah L Heyl. J Chem Inf Model 2012
8
50


Genistein: A Dual Inhibitor of Both Amyloid β and Human Islet Amylin Peptides.
Baiping Ren, Yonglan Liu, Yanxian Zhang, Yongqing Cai, Xiong Gong, Yung Chang, Lijian Xu, Jie Zheng. ACS Chem Neurosci 2018
58
50


MMPBSA.py: An Efficient Program for End-State Free Energy Calculations.
Bill R Miller, T Dwight McGee, Jason M Swails, Nadine Homeyer, Holger Gohlke, Adrian E Roitberg. J Chem Theory Comput 2012
50


Design of a mimic of nonamyloidogenic and bioactive human islet amyloid polypeptide (IAPP) as nanomolar affinity inhibitor of IAPP cytotoxic fibrillogenesis.
Li-Mei Yan, Marianna Tatarek-Nossol, Aleksandra Velkova, Athanasios Kazantzis, Aphrodite Kapurniotu. Proc Natl Acad Sci U S A 2006
179
50

Graphene oxide inhibits hIAPP amyloid fibrillation and toxicity in insulin-producing NIT-1 cells.
Praveen Nedumpully-Govindan, Esteban N Gurzov, Pengyu Chen, Emily H Pilkington, William J Stanley, Sara A Litwak, Thomas P Davis, Pu Chun Ke, Feng Ding. Phys Chem Chem Phys 2016
46
50

Peptide conformation and supramolecular organization in amylin fibrils: constraints from solid-state NMR.
Sorin Luca, Wai-Ming Yau, Richard Leapman, Robert Tycko. Biochemistry 2007
446
50

Crystal Structures of IAPP Amyloidogenic Segments Reveal a Novel Packing Motif of Out-of-Register Beta Sheets.
Angela B Soriaga, Smriti Sangwan, Ramsay Macdonald, Michael R Sawaya, David Eisenberg. J Phys Chem B 2016
47
50


Probing amyloid fibril formation of the NFGAIL peptide by computer simulations.
Adrien Melquiond, Jean-Christophe Gelly, Normand Mousseau, Philippe Derreumaux. J Chem Phys 2007
31
50


Human islet amyloid polypeptide monomers form ordered beta-hairpins: a possible direct amyloidogenic precursor.
Nicholas F Dupuis, Chun Wu, Joan-Emma Shea, Michael T Bowers. J Am Chem Soc 2009
165
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.