A citation-based method for searching scientific literature


List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Temperature effect on CRISPR-Cas9 mediated genome editing.
Guanghai Xiang, Xingying Zhang, Chenrui An, Chen Cheng, Haoyi Wang. J Genet Genomics 2017
34
100

REPuter: the manifold applications of repeat analysis on a genomic scale.
S Kurtz, J V Choudhuri, E Ohlebusch, C Schleiermacher, J Stoye, R Giegerich. Nucleic Acids Res 2001
778
100

Efficient Replication of the Plastid Genome Requires an Organellar Thymidine Kinase.
Monique Le Ret, Susan Belcher, Stéfanie Graindorge, Clémentine Wallet, Sandrine Koechler, Mathieu Erhardt, Rosalind Williams-Carrier, Alice Barkan, José M Gualberto. Plant Physiol 2018
5
100

Arabidopsis thaliana organelles mimic the T7 phage DNA replisome with specific interactions between Twinkle protein and DNA polymerases Pol1A and Pol1B.
Stewart A Morley, Antolín Peralta-Castro, Luis G Brieba, Justin Miller, Kai Li Ong, Perry G Ridge, Amanda Oliphant, Stephen Aldous, Brent L Nielsen. BMC Plant Biol 2019
9
100

The tobacco genome sequence and its comparison with those of tomato and potato.
Nicolas Sierro, James N D Battey, Sonia Ouadi, Nicolas Bakaher, Lucien Bovet, Adrian Willig, Simon Goepfert, Manuel C Peitsch, Nikolai V Ivanov. Nat Commun 2014
237
100

Targeted mutagenesis of Arabidopsis thaliana using engineered TAL effector nucleases.
Michelle Christian, Yiping Qi, Yong Zhang, Daniel F Voytas. G3 (Bethesda) 2013
69
100


Functional analysis of two maize cDNAs encoding T7-like RNA polymerases.
C C Chang, J Sheen, M Bligny, Y Niwa, S Lerbs-Mache, D B Stern. Plant Cell 1999
81
100

Whole plastid transcriptomes reveal abundant RNA editing sites and differential editing status in Phalaenopsis aphrodite subsp. formosana.
Ting-Chieh Chen, Yu-Chang Liu, Xuewen Wang, Chi-Hsuan Wu, Chih-Hao Huang, Ching-Chun Chang. Bot Stud 2017
20
100

Whirly proteins maintain plastid genome stability in Arabidopsis.
Alexandre Maréchal, Jean-Sébastien Parent, Félix Véronneau-Lafortune, Alexandre Joyeux, B Franz Lang, Normand Brisson. Proc Natl Acad Sci U S A 2009
130
100


Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting.
Tomas Cermak, Erin L Doyle, Michelle Christian, Li Wang, Yong Zhang, Clarice Schmidt, Joshua A Baller, Nikunj V Somia, Adam J Bogdanove, Daniel F Voytas. Nucleic Acids Res 2011
100

Plant organellar DNA polymerases repair double-stranded breaks by microhomology-mediated end-joining.
Paola L García-Medel, Noe Baruch-Torres, Antolín Peralta-Castro, Carlos H Trasviña-Arenas, Alfredo Torres-Larios, Luis G Brieba. Nucleic Acids Res 2019
19
100

CRISPR/Cas Genome Editing and Precision Plant Breeding in Agriculture.
Kunling Chen, Yanpeng Wang, Rui Zhang, Huawei Zhang, Caixia Gao. Annu Rev Plant Biol 2019
282
100

Chloroplast and mitochondrial DNA editing in plants.
Beum-Chang Kang, Su-Ji Bae, Seonghyun Lee, Jeong Sun Lee, Annie Kim, Hyunji Lee, Gayoung Baek, Huiyun Seo, Jihun Kim, Jin-Soo Kim. Nat Plants 2021
4
100


Functional analysis of plastid DNA replication origins in tobacco by targeted inactivation.
Stefan K Mühlbauer, Andreas Lössl, Lilia Tzekova, Zhurong Zou, Hans-Ulrich Koop. Plant J 2002
25
100

TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction.
Erin L Doyle, Nicholas J Booher, Daniel S Standage, Daniel F Voytas, Volker P Brendel, John K Vandyk, Adam J Bogdanove. Nucleic Acids Res 2012
402
100

TALEN outperforms Cas9 in editing heterochromatin target sites.
Surbhi Jain, Saurabh Shukla, Che Yang, Meng Zhang, Zia Fatma, Manasi Lingamaneni, Shireen Abesteh, Stephan Thomas Lane, Xiong Xiong, Yuchuan Wang,[...]. Nat Commun 2021
7
100

Targeted base editing in the plastid genome of Arabidopsis thaliana.
Issei Nakazato, Miki Okuno, Hiroshi Yamamoto, Yoshiko Tamura, Takehiko Itoh, Toshiharu Shikanai, Hideki Takanashi, Nobuhiro Tsutsumi, Shin-Ichi Arimura. Nat Plants 2021
6
100

Impaired function of the phage-type RNA polymerase RpoTp in transcription of chloroplast genes is compensated by a second phage-type RNA polymerase.
Monika Swiatecka-Hagenbruch, Carola Emanuel, Boris Hedtke, Karsten Liere, Thomas Börner. Nucleic Acids Res 2008
47
100

RecA maintains the integrity of chloroplast DNA molecules in Arabidopsis.
Beth A Rowan, Delene J Oldenburg, Arnold J Bendich. J Exp Bot 2010
70
100

Transactivation of protein expression by rice HSP101 in planta and using Hsp101 as a selection marker for transformation.
Ching-Chun Chang, Pin-Sheng Huang, Huei-Ru Lin, Chun-Hsien Lu. Plant Cell Physiol 2007
17
100

Phage-type RNA polymerase RPOTmp transcribes the rrn operon from the PC promoter at early developmental stages in Arabidopsis.
Florence Courtois, Livia Merendino, Emilie Demarsy, Régis Mache, Silva Lerbs-Mache. Plant Physiol 2007
43
100

Transcription activator-like effector nucleases enable efficient plant genome engineering.
Yong Zhang, Feng Zhang, Xiaohong Li, Joshua A Baller, Yiping Qi, Colby G Starker, Adam J Bogdanove, Daniel F Voytas. Plant Physiol 2013
224
100

Divergent roles for the two PolI-like organelle DNA polymerases of Arabidopsis.
Jean-Sébastien Parent, Etienne Lepage, Normand Brisson. Plant Physiol 2011
67
100


Targeted gene disruption of ATP synthases 6-1 and 6-2 in the mitochondrial genome of Arabidopsis thaliana by mitoTALENs.
Shin-Ichi Arimura, Hiroki Ayabe, Hajime Sugaya, Miki Okuno, Yoshiko Tamura, Yu Tsuruta, Yuta Watari, Shungo Yanase, Takaki Yamauchi, Takehiko Itoh,[...]. Plant J 2020
14
100

The chloroplast genome of Phalaenopsis aphrodite (Orchidaceae): comparative analysis of evolutionary rate with that of grasses and its phylogenetic implications.
Ching-Chun Chang, Hsien-Chia Lin, I-Pin Lin, Teh-Yuan Chow, Hong-Hwa Chen, Wen-Huei Chen, Chia-Hsiung Cheng, Chung-Yen Lin, Shu-Mei Liu, Chien-Chang Chang,[...]. Mol Biol Evol 2006
178
100

GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes.
Jian-Jun Jin, Wen-Bin Yu, Jun-Bo Yang, Yu Song, Claude W dePamphilis, Ting-Shuang Yi, De-Zhu Li. Genome Biol 2020
316
100


The comparative chloroplast genomic analysis of photosynthetic orchids and developing DNA markers to distinguish Phalaenopsis orchids.
Cheng-Fong Jheng, Tien-Chih Chen, Jhong-Yi Lin, Ting-Chieh Chen, Wen-Luan Wu, Ching-Chun Chang. Plant Sci 2012
42
100


DNA Gyrase Is the Target for the Quinolone Drug Ciprofloxacin in Arabidopsis thaliana.
Katherine M Evans-Roberts, Lesley A Mitchenall, Melisa K Wall, Julie Leroux, Joshua S Mylne, Anthony Maxwell. J Biol Chem 2016
32
100


Cas9/gRNA-mediated genome editing of yeast mitochondria and Chlamydomonas chloroplasts.
Byung-Chun Yoo, Narendra S Yadav, Emil M Orozco, Hajime Sakai. PeerJ 2020
13
100

Extrachromosomal elements in tobacco plastids.
J M Staub, P Maliga. Proc Natl Acad Sci U S A 1994
36
100


Plant Organelle Genome Replication.
Stewart A Morley, Niaz Ahmad, Brent L Nielsen. Plants (Basel) 2019
11
100


Spontaneous Chloroplast Mutants Mostly Occur by Replication Slippage and Show a Biased Pattern in the Plastome of Oenothera.
Amid Massouh, Julia Schubert, Liliya Yaneva-Roder, Elena S Ulbricht-Jones, Arkadiusz Zupok, Marc T J Johnson, Stephen I Wright, Tommaso Pellizzer, Johanna Sobanski, Ralph Bock,[...]. Plant Cell 2016
28
100

Chloroplast RNA polymerases: Role in chloroplast biogenesis.
Thomas Börner, Anastasia Yu Aleynikova, Yan O Zubo, Victor V Kusnetsov. Biochim Biophys Acta 2015
113
100

Recombination and the maintenance of plant organelle genome stability.
Alexandre Maréchal, Normand Brisson. New Phytol 2010
217
100

Targeted disruption of the plastid RNA polymerase genes rpoA, B and C1: molecular biology, biochemistry and ultrastructure.
G De Santis-MacIossek, W Kofer, A Bock, S Schoch, R M Maier, G Wanner, W Rüdiger, H U Koop, R G Herrmann. Plant J 1999
110
100

Crystal structures of DNA-Whirly complexes and their role in Arabidopsis organelle genome repair.
Laurent Cappadocia, Alexandre Maréchal, Jean-Sébastien Parent, Etienne Lepage, Jurgen Sygusch, Normand Brisson. Plant Cell 2010
84
100

Curing cytoplasmic male sterility via TALEN-mediated mitochondrial genome editing.
Tomohiko Kazama, Miki Okuno, Yuta Watari, Shungo Yanase, Chie Koizuka, Yu Tsuruta, Hajime Sugaya, Atsushi Toyoda, Takehiko Itoh, Nobuhiro Tsutsumi,[...]. Nat Plants 2019
39
100


DNA maintenance in plastids and mitochondria of plants.
Delene J Oldenburg, Arnold J Bendich. Front Plant Sci 2015
62
100



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.