A citation-based method for searching scientific literature

Hyunbin Kim, Jeongmin Ju, Hae Nim Lee, Hyeyeon Chun, Jihye Seong. Sensors (Basel) 2021
Times Cited: 5







List of co-cited articles
5 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Structure-guided evolution of cyan fluorescent proteins towards a quantum yield of 93%.
Joachim Goedhart, David von Stetten, Marjolaine Noirclerc-Savoye, Mickaël Lelimousin, Linda Joosen, Mark A Hink, Laura van Weeren, Theodorus W J Gadella, Antoine Royant. Nat Commun 2012
434
40

pH-Lemon, a Fluorescent Protein-Based pH Reporter for Acidic Compartments.
Sandra Burgstaller, Helmut Bischof, Thomas Gensch, Sarah Stryeck, Benjamin Gottschalk, Jeta Ramadani-Muja, Emrah Eroglu, Rene Rost, Sabine Balfanz, Arnd Baumann,[...]. ACS Sens 2019
51
40

A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications.
Takeharu Nagai, Keiji Ibata, Eun Sun Park, Mie Kubota, Katsuhiko Mikoshiba, Atsushi Miyawaki. Nat Biotechnol 2002
40

Fluorescent proteins and their applications in imaging living cells and tissues.
Dmitriy M Chudakov, Mikhail V Matz, Sergey Lukyanov, Konstantin A Lukyanov. Physiol Rev 2010
762
40

Monitoring hippocampal glycine with the computationally designed optical sensor GlyFS.
William H Zhang, Michel K Herde, Joshua A Mitchell, Jason H Whitfield, Andreas B Wulff, Vanessa Vongsouthi, Inmaculada Sanchez-Romero, Polina E Gulakova, Daniel Minge, Björn Breithausen,[...]. Nat Chem Biol 2018
37
40

Autophagy and Neurodegeneration: Pathogenic Mechanisms and Therapeutic Opportunities.
Fiona M Menzies, Angeleen Fleming, Andrea Caricasole, Carla F Bento, Stephen P Andrews, Avraham Ashkenazi, Jens Füllgrabe, Anne Jackson, Maria Jimenez Sanchez, Cansu Karabiyik,[...]. Neuron 2017
578
20

Trehalose Alters Subcellular Trafficking and the Metabolism of the Alzheimer-associated Amyloid Precursor Protein.
Nguyen T Tien, Ilker Karaca, Irfan Y Tamboli, Jochen Walter. J Biol Chem 2016
37
20

Visualizing and Modulating Mitophagy for Therapeutic Studies of Neurodegeneration.
Hiroyuki Katayama, Hiroshi Hama, Koji Nagasawa, Hiroshi Kurokawa, Mayu Sugiyama, Ryoko Ando, Masaaki Funata, Nobuyo Yoshida, Misaki Homma, Takanori Nishimura,[...]. Cell 2020
39
20

mTOR: a pharmacologic target for autophagy regulation.
Young Chul Kim, Kun-Liang Guan. J Clin Invest 2015
887
20

Regulation of autophagy by the Rab GTPase network.
X Ao, L Zou, Y Wu. Cell Death Differ 2014
217
20

Autophagy: more than a nonselective pathway.
Fulvio Reggiori, Masaaki Komatsu, Kim Finley, Anne Simonsen. Int J Cell Biol 2012
98
20

A role for the NAD-dependent deacetylase Sirt1 in the regulation of autophagy.
In Hye Lee, Liu Cao, Raul Mostoslavsky, David B Lombard, Jie Liu, Nicholas E Bruns, Maria Tsokos, Frederick W Alt, Toren Finkel. Proc Natl Acad Sci U S A 2008
994
20

Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells.
N Mizushima, A Yamamoto, M Hatano, Y Kobayashi, Y Kabeya, K Suzuki, T Tokuhisa, Y Ohsumi, T Yoshimori. J Cell Biol 2001
20

Improving the photostability of bright monomeric orange and red fluorescent proteins.
Nathan C Shaner, Michael Z Lin, Michael R McKeown, Paul A Steinbach, Kristin L Hazelwood, Michael W Davidson, Roger Y Tsien. Nat Methods 2008
650
20

Mechanisms of protein toxicity in neurodegenerative diseases.
Chang Geon Chung, Hyosang Lee, Sung Bae Lee. Cell Mol Life Sci 2018
59
20

LC3-Associated Endocytosis Facilitates β-Amyloid Clearance and Mitigates Neurodegeneration in Murine Alzheimer's Disease.
Bradlee L Heckmann, Brett J W Teubner, Bart Tummers, Emilio Boada-Romero, Lacie Harris, Mao Yang, Clifford S Guy, Stanislav S Zakharenko, Douglas R Green. Cell 2019
176
20

Microglia clear neuron-released α-synuclein via selective autophagy and prevent neurodegeneration.
Insup Choi, Yuanxi Zhang, Steven P Seegobin, Mathilde Pruvost, Qian Wang, Kerry Purtell, Bin Zhang, Zhenyu Yue. Nat Commun 2020
131
20

Lewy body-like α-synuclein aggregates resist degradation and impair macroautophagy.
Selcuk A Tanik, Christine E Schultheiss, Laura A Volpicelli-Daley, Kurt R Brunden, Virginia M Y Lee. J Biol Chem 2013
206
20


Engineering an improved light-induced dimer (iLID) for controlling the localization and activity of signaling proteins.
Gurkan Guntas, Ryan A Hallett, Seth P Zimmerman, Tishan Williams, Hayretin Yumerefendi, James E Bear, Brian Kuhlman. Proc Natl Acad Sci U S A 2015
308
20

Nuclear LC3-positive puncta in stressed cells do not represent autophagosomes.
Erin M Buckingham, John E Carpenter, Wallen Jackson, Charles Grose. Biotechniques 2014
10
20


Autophagy induction and autophagosome clearance in neurons: relationship to autophagic pathology in Alzheimer's disease.
Barry Boland, Asok Kumar, Sooyeon Lee, Frances M Platt, Jerzy Wegiel, W Haung Yu, Ralph A Nixon. J Neurosci 2008
777
20

Structural and spectral response of green fluorescent protein variants to changes in pH.
M A Elsliger, R M Wachter, G T Hanson, K Kallio, S J Remington. Biochemistry 1999
240
20

SNARE-mediated membrane fusion in autophagy.
Yongyao Wang, Linsen Li, Chen Hou, Ying Lai, Jiangang Long, Jiankang Liu, Qing Zhong, Jiajie Diao. Semin Cell Dev Biol 2016
65
20

Bright monomeric red fluorescent protein with an extended fluorescence lifetime.
Ekaterina M Merzlyak, Joachim Goedhart, Dmitry Shcherbo, Mariya E Bulina, Aleksandr S Shcheglov, Arkady F Fradkov, Anna Gaintzeva, Konstantin A Lukyanov, Sergey Lukyanov, Theodorus W J Gadella,[...]. Nat Methods 2007
409
20

Concatenation of cyan and yellow fluorescent proteins for efficient resonance energy transfer.
Satoshi Shimozono, Haruko Hosoi, Hideaki Mizuno, Takashi Fukano, Tahei Tahara, Atsushi Miyawaki. Biochemistry 2006
46
20

Lysosome activation clears aggregates and enhances quiescent neural stem cell activation during aging.
Dena S Leeman, Katja Hebestreit, Tyson Ruetz, Ashley E Webb, Andrew McKay, Elizabeth A Pollina, Ben W Dulken, Xiaoai Zhao, Robin W Yeo, Theodore T Ho,[...]. Science 2018
205
20

Autophagy-dependent removal of α-synuclein: a novel mechanism of GM1 ganglioside neuroprotection against Parkinson's disease.
Yu-Lin Guo, Wen-Jun Duan, Dan-Hua Lu, Xiao-Hui Ma, Xiao-Xiao Li, Zhao Li, Wei Bi, Hiroshi Kurihara, Hai-Zhi Liu, Yi-Fang Li,[...]. Acta Pharmacol Sin 2021
15
20

Assaying of autophagic protein degradation.
Chantal Bauvy, Alfred J Meijer, Patrice Codogno. Methods Enzymol 2009
66
20

Monitoring autophagic flux by an improved tandem fluorescent-tagged LC3 (mTagRFP-mWasabi-LC3) reveals that high-dose rapamycin impairs autophagic flux in cancer cells.
Cuihong Zhou, Wu Zhong, Jun Zhou, Fugeng Sheng, Ziyuan Fang, Yue Wei, Yingyu Chen, Xiaoyan Deng, Bin Xia, Jian Lin. Autophagy 2012
162
20

Chloroquine inhibits autophagic flux by decreasing autophagosome-lysosome fusion.
Mario Mauthe, Idil Orhon, Cecilia Rocchi, Xingdong Zhou, Morten Luhr, Kerst-Jan Hijlkema, Robert P Coppes, Nikolai Engedal, Muriel Mari, Fulvio Reggiori. Autophagy 2018
765
20

Rosella: a fluorescent pH-biosensor for reporting vacuolar turnover of cytosol and organelles in yeast.
Carlos J Rosado, Dalibor Mijaljica, Irene Hatzinisiriou, Mark Prescott, Rodney J Devenish. Autophagy 2008
95
20

MAPT/Tau accumulation represses autophagy flux by disrupting IST1-regulated ESCRT-III complex formation: a vicious cycle in Alzheimer neurodegeneration.
Qiong Feng, Yu Luo, Xiang-Nan Zhang, Xi-Fei Yang, Xiao-Yue Hong, Dong-Shen Sun, Xia-Chun Li, Yu Hu, Xiao-Guang Li, Jun-Fei Zhang,[...]. Autophagy 2020
54
20

Wild type alpha-synuclein is degraded by chaperone-mediated autophagy and macroautophagy in neuronal cells.
Tereza Vogiatzi, Maria Xilouri, Kostas Vekrellis, Leonidas Stefanis. J Biol Chem 2008
447
20

How shall I eat thee?
Daniel J Klionsky, Ana Maria Cuervo, William A Dunn, Beth Levine, Ida van der Klei, Per O Seglen. Autophagy 2007
113
20

Monitoring the Changes of pH in Lysosomes during Autophagy and Apoptosis by Plasmon Enhanced Raman Imaging.
Shan-Shan Li, Miao Zhang, Jian-Hua Wang, Fan Yang, Bin Kang, Jing-Juan Xu, Hong-Yuan Chen. Anal Chem 2019
32
20

Calpain is required for macroautophagy in mammalian cells.
Francesca Demarchi, Cosetta Bertoli, Tamara Copetti, Isei Tanida, Claudio Brancolini, Eeva-Liisa Eskelinen, Claudio Schneider. J Cell Biol 2006
138
20


Photoswitchable cyan fluorescent protein for protein tracking.
Dmitriy M Chudakov, Vladislav V Verkhusha, Dmitry B Staroverov, Ekaterina A Souslova, Sergey Lukyanov, Konstantin A Lukyanov. Nat Biotechnol 2004
241
20

Regulation of autophagy by phosphatidylinositol 3-phosphate.
Chloe Burman, Nicholas T Ktistakis. FEBS Lett 2010
141
20

The use of pHluorins for optical measurements of presynaptic activity.
S Sankaranarayanan, D De Angelis, J E Rothman, T A Ryan. Biophys J 2000
381
20

Pimozide reduces toxic forms of tau in TauC3 mice via 5' adenosine monophosphate-activated protein kinase-mediated autophagy.
Young Doo Kim, Eun Il Jeong, Jihoon Nah, Seung-Min Yoo, Won Jae Lee, Youbin Kim, Seowon Moon, Se-Hoon Hong, Yong-Keun Jung. J Neurochem 2017
19
20


AMPK and autophagy get connected.
D Grahame Hardie. EMBO J 2011
148
20


Mechanisms of mitophagy in cellular homeostasis, physiology and pathology.
Konstantinos Palikaras, Eirini Lionaki, Nektarios Tavernarakis. Nat Cell Biol 2018
462
20


Regulation of selective autophagy: the p62/SQSTM1 paradigm.
Trond Lamark, Steingrim Svenning, Terje Johansen. Essays Biochem 2017
269
20

pHlameleons: a family of FRET-based protein sensors for quantitative pH imaging.
Alessandro Esposito, Matthias Gralle, Maria Angela C Dani, Dirk Lange, Fred S Wouters. Biochemistry 2008
53
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.