A citation-based method for searching scientific literature

Sylvan Manuel Caspar, Timo Schneider, Patricia Stoll, Janine Meienberg, Gabor Matyas. Pharmacogenomics 2021
Times Cited: 6







List of co-cited articles
34 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Clinical Pharmacogenetics Implementation Consortium (CPIC) guideline for CYP2D6 genotype and use of ondansetron and tropisetron.
G C Bell, K E Caudle, M Whirl-Carrillo, R J Gordon, K Hikino, C A Prows, A Gaedigk, Jag Agundez, S Sadhasivam, T E Klein,[...]. Clin Pharmacol Ther 2017
105
50

NanoReviser: An Error-Correction Tool for Nanopore Sequencing Based on a Deep Learning Algorithm.
Luotong Wang, Li Qu, Longshu Yang, Yiying Wang, Huaiqiu Zhu. Front Genet 2020
10
33

Direct RNA sequencing.
Fatih Ozsolak, Adam R Platt, Dan R Jones, Jeffrey G Reifenberger, Lauryn E Sass, Peter McInerney, John F Thompson, Jayson Bowers, Mirna Jarosz, Patrice M Milos. Nature 2009
269
33

The Versatility of SMRT Sequencing.
Matthew S Hestand, Adam Ameur. Genes (Basel) 2019
9
33

Advances and challenges in epigenomic single-cell sequencing applications.
Martin Philpott, Adam P Cribbs, Tom Brown, Tom Brown, Udo Oppermann. Curr Opin Chem Biol 2020
10
33

Genome of the Single Human Chromosome 18 as a "Gold Standard" for Its Transcriptome.
Ekaterina Ilgisonis, Nikita Vavilov, Elena Ponomarenko, Andrey Lisitsa, Ekaterina Poverennaya, Victor Zgoda, Sergey Radko, Alexander Archakov. Front Genet 2021
5
40

Machine Intelligence in Single-Cell Data Analysis: Advances and New Challenges.
Jiajia Liu, Zhiwei Fan, Weiling Zhao, Xiaobo Zhou. Front Genet 2021
11
33

4-Methylcytosine DNA modification is critical for global epigenetic regulation and virulence in the human pathogen Leptospira interrogans.
Robert A Gaultney, Antony T Vincent, Céline Lorioux, Jean-Yves Coppée, Odile Sismeiro, Hugo Varet, Rachel Legendre, Charlotte A Cockram, Frédéric J Veyrier, Mathieu Picardeau. Nucleic Acids Res 2020
9
33


Detecting and phasing minor single-nucleotide variants from long-read sequencing data.
Zhixing Feng, Jose C Clemente, Brandon Wong, Eric E Schadt. Nat Commun 2021
9
33

A Sight on Single-Cell Transcriptomics in Plants Through the Prism of Cell-Based Computational Modeling Approaches: Benefits and Challenges for Data Analysis.
Aleksandr Bobrovskikh, Alexey Doroshkov, Stefano Mazzoleni, Fabrizio Cartenì, Francesco Giannino, Ulyana Zubairova. Front Genet 2021
3
66

Harnessing Current Knowledge of DNA N6-Methyladenosine From Model Plants for Non-model Crops.
Sadaruddin Chachar, Jingrong Liu, Pingxian Zhang, Adeel Riaz, Changfei Guan, Shuyuan Liu. Front Genet 2021
9
33

Multi-omics data integration considerations and study design for biological systems and disease.
Stefan Graw, Kevin Chappell, Charity L Washam, Allen Gies, Jordan Bird, Michael S Robeson, Stephanie D Byrum. Mol Omics 2021
29
33

Single-cell multimodal omics: the power of many.
Chenxu Zhu, Sebastian Preissl, Bing Ren. Nat Methods 2020
123
33

Elucidation of Biological Networks across Complex Diseases Using Single-Cell Omics.
Yang Li, Anjun Ma, Ewy A Mathé, Lang Li, Bingqiang Liu, Qin Ma. Trends Genet 2020
10
33

Evolution of Drug-Resistant Mycobacterium tuberculosis Strains and Their Adaptation to the Human Lung Environment.
Anna Allué-Guardia, Juan I García, Jordi B Torrelles. Front Microbiol 2021
26
33

Nanopore sequencing and assembly of a human genome with ultra-long reads.
Miten Jain, Sergey Koren, Karen H Miga, Josh Quick, Arthur C Rand, Thomas A Sasani, John R Tyson, Andrew D Beggs, Alexander T Dilthey, Ian T Fiddes,[...]. Nat Biotechnol 2018
780
33

Recent Advances in Integrative Multi-Omics Research in Breast and Ovarian Cancer.
Christen A Khella, Gaurav A Mehta, Rushabh N Mehta, Michael L Gatza. J Pers Med 2021
7
33



Opportunities and challenges in long-read sequencing data analysis.
Shanika L Amarasinghe, Shian Su, Xueyi Dong, Luke Zappia, Matthew E Ritchie, Quentin Gouil. Genome Biol 2020
334
33

Streamlining data-intensive biology with workflow systems.
Taylor Reiter, Phillip T Brooks, Luiz Irber, Shannon E K Joslin, Charles M Reid, Camille Scott, C Titus Brown, N Tessa Pierce-Ward. Gigascience 2021
14
33

TALC: Transcript-level Aware Long-read Correction.
Lucile Broseus, Aubin Thomas, Andrew J Oldfield, Dany Severac, Emeric Dubois, William Ritchie. Bioinformatics 2020
9
33


Initial sequencing and analysis of the human genome.
E S Lander, L M Linton, B Birren, C Nusbaum, M C Zody, J Baldwin, K Devon, K Dewar, M Doyle, W FitzHugh,[...]. Nature 2001
33

Clinical Pharmacogenetics Implementation Consortium (CPIC) Guideline for Dihydropyrimidine Dehydrogenase Genotype and Fluoropyrimidine Dosing: 2017 Update.
Ursula Amstutz, Linda M Henricks, Steven M Offer, Julia Barbarino, Jan H M Schellens, Jesse J Swen, Teri E Klein, Howard L McLeod, Kelly E Caudle, Robert B Diasio,[...]. Clin Pharmacol Ther 2018
249
33


The Pharmacogene Variation (PharmVar) Consortium: Incorporation of the Human Cytochrome P450 (CYP) Allele Nomenclature Database.
Andrea Gaedigk, Magnus Ingelman-Sundberg, Neil A Miller, J Steven Leeder, Michelle Whirl-Carrillo, Teri E Klein. Clin Pharmacol Ther 2018
209
33

Clinical Pharmacogenetics Implementation Consortium (CPIC) Guidelines for CYP2C19 and Voriconazole Therapy.
B Moriyama, A Owusu Obeng, J Barbarino, S R Penzak, S A Henning, S A Scott, Jag Agúndez, J R Wingard, H L McLeod, T E Klein,[...]. Clin Pharmacol Ther 2017
168
33

Clinical Pharmacogenetics Implementation Consortium (CPIC) Guideline for CYP2D6 and Tamoxifen Therapy.
Matthew P Goetz, Katrin Sangkuhl, Henk-Jan Guchelaar, Matthias Schwab, Michael Province, Michelle Whirl-Carrillo, W Fraser Symmans, Howard L McLeod, Mark J Ratain, Hitoshi Zembutsu,[...]. Clin Pharmacol Ther 2018
156
33

Clinical Pharmacogenetics Implementation Consortium Guideline (CPIC) for CYP2C9 and Nonsteroidal Anti-Inflammatory Drugs.
Katherine N Theken, Craig R Lee, Li Gong, Kelly E Caudle, Christine M Formea, Andrea Gaedigk, Teri E Klein, José A G Agúndez, Tilo Grosser. Clin Pharmacol Ther 2020
99
33

Clinical Pharmacogenetics Implementation Consortium (CPIC) Guideline for CYP2C19 and Proton Pump Inhibitor Dosing.
John J Lima, Cameron D Thomas, Julia Barbarino, Zeruesenay Desta, Sara L Van Driest, Nihal El Rouby, Julie A Johnson, Larisa H Cavallari, Valentina Shakhnovich, David L Thacker,[...]. Clin Pharmacol Ther 2021
68
33

Clinical Pharmacogenetics Implementation Consortium guidelines for cytochrome P450 2D6 genotype and codeine therapy: 2014 update.
K R Crews, A Gaedigk, H M Dunnenberger, J S Leeder, T E Klein, K E Caudle, C E Haidar, D D Shen, J T Callaghan, S Sadhasivam,[...]. Clin Pharmacol Ther 2014
411
33

Pharmacogenomics knowledge for personalized medicine.
M Whirl-Carrillo, E M McDonagh, J M Hebert, L Gong, K Sangkuhl, C F Thorn, R B Altman, T E Klein. Clin Pharmacol Ther 2012
33

Population Genomic- and Phylogenomic-Enabled Advances to Increase Insight Into Pathogen Biology and Epidemiology.
Remco Stam, Pierre Gladieux, Boris A Vinatzer, Erica M Goss, Neha Potnis, Thierry Candresse, Marin Talbot Brewer. Phytopathology 2021
3
33

Pinpointing Cell Identity in Time and Space.
Anca F Savulescu, Caron Jacobs, Yutaka Negishi, Laurianne Davignon, Musa M Mhlanga. Front Mol Biosci 2020
9
16

Integrating single-cell and spatial transcriptomics to elucidate intercellular tissue dynamics.
Sophia K Longo, Margaret G Guo, Andrew L Ji, Paul A Khavari. Nat Rev Genet 2021
127
16

New avenues for systematically inferring cell-cell communication: through single-cell transcriptomics data.
Xin Shao, Xiaoyan Lu, Jie Liao, Huajun Chen, Xiaohui Fan. Protein Cell 2020
34
16

Methylation analysis of Klebsiella pneumoniae from Portuguese hospitals.
Anton Spadar, João Perdigão, Jody Phelan, James Charleston, Ana Modesto, Rita Elias, Paola Florez de Sessions, Martin L Hibberd, Susana Campino, Aida Duarte,[...]. Sci Rep 2021
6
16

Chromatin accessibility dynamics in a model of human forebrain development.
Alexandro E Trevino, Nasa Sinnott-Armstrong, Jimena Andersen, Se-Jin Yoon, Nina Huber, Jonathan K Pritchard, Howard Y Chang, William J Greenleaf, Sergiu P Pașca. Science 2020
82
16

Genome-wide CpG density and DNA methylation analysis method (MeDIP, RRBS, and WGBS) comparisons.
Daniel Beck, Millissia Ben Maamar, Michael K Skinner. Epigenetics 2022
11
16



RNA-sequencing from single nuclei.
Rashel V Grindberg, Joyclyn L Yee-Greenbaum, Michael J McConnell, Mark Novotny, Andy L O'Shaughnessy, Georgina M Lambert, Marcos J Araúzo-Bravo, Jun Lee, Max Fishman, Gillian E Robbins,[...]. Proc Natl Acad Sci U S A 2013
182
16

PBSIM2: a simulator for long-read sequencers with a novel generative model of quality scores.
Yukiteru Ono, Kiyoshi Asai, Michiaki Hamada. Bioinformatics 2021
16
16

Long-read cDNA sequencing identifies functional pseudogenes in the human transcriptome.
Robin-Lee Troskie, Yohaann Jafrani, Tim R Mercer, Adam D Ewing, Geoffrey J Faulkner, Seth W Cheetham. Genome Biol 2021
10
16


Illuminating the dark side of the human transcriptome with long read transcript sequencing.
Richard I Kuo, Yuanyuan Cheng, Runxuan Zhang, John W S Brown, Jacqueline Smith, Alan L Archibald, David W Burt. BMC Genomics 2020
28
16

Single-Cell Sequencing, an Advanced Technology in Lung Cancer Research.
Hao Wang, Die Meng, Haoyue Guo, Chenglong Sun, Peixin Chen, Minlin Jiang, Yi Xu, Jia Yu, Qiyu Fang, Jun Zhu,[...]. Onco Targets Ther 2021
3
33

Investigation of Burkholderia cepacia Complex Methylomes via Single-Molecule, Real-Time Sequencing and Mutant Analysis.
Olga Mannweiler, Marta Pinto-Carbó, Martina Lardi, Kirsty Agnoli, Leo Eberl. J Bacteriol 2021
3
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.