A citation-based method for searching scientific literature

Paul J Wrighton, Arkadi Shwartz, Jin-Mi Heo, Eleanor D Quenzer, Kyle A LaBella, J Wade Harper, Wolfram Goessling. J Cell Sci 2021
Times Cited: 8







List of co-cited articles
60 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Basal Mitophagy Occurs Independently of PINK1 in Mouse Tissues of High Metabolic Demand.
Thomas G McWilliams, Alan R Prescott, Lambert Montava-Garriga, Graeme Ball, François Singh, Erica Barini, Miratul M K Muqit, Simon P Brooks, Ian G Ganley. Cell Metab 2018
243
62

Basal mitophagy is widespread in Drosophila but minimally affected by loss of Pink1 or parkin.
Juliette J Lee, Alvaro Sanchez-Martinez, Aitor Martinez Zarate, Cristiane Benincá, Ugo Mayor, Michael J Clague, Alexander J Whitworth. J Cell Biol 2018
140
62

mito-QC illuminates mitophagy and mitochondrial architecture in vivo.
Thomas G McWilliams, Alan R Prescott, George F G Allen, Jevgenia Tamjar, Michael J Munson, Calum Thomson, Miratul M K Muqit, Ian G Ganley. J Cell Biol 2016
206
50

Loss of iron triggers PINK1/Parkin-independent mitophagy.
George F G Allen, Rachel Toth, John James, Ian G Ganley. EMBO Rep 2013
263
50

Parkin and PINK1 mitigate STING-induced inflammation.
Danielle A Sliter, Jennifer Martinez, Ling Hao, Xi Chen, Nuo Sun, Tara D Fischer, Jonathon L Burman, Yan Li, Zhe Zhang, Derek P Narendra,[...]. Nature 2018
420
50

Mt-Keima detects PINK1-PRKN mitophagy in vivo with greater sensitivity than mito-QC.
Yi-Ting Liu, Danielle A Sliter, Mario K Shammas, Xiaoping Huang, Chunxin Wang, Hannah Calvelli, Dragan S Maric, Derek P Narendra. Autophagy 2021
6
50

A comparative map of macroautophagy and mitophagy in the vertebrate eye.
Thomas G McWilliams, Alan R Prescott, Beatriz Villarejo-Zori, Graeme Ball, Patricia Boya, Ian G Ganley. Autophagy 2019
22
37

Phosphorylation of Parkin at serine 65 is essential for its activation in vivo.
Thomas G McWilliams, Erica Barini, Risto Pohjolan-Pirhonen, Simon P Brooks, François Singh, Sophie Burel, Kristin Balk, Atul Kumar, Lambert Montava-Garriga, Alan R Prescott,[...]. Open Biol 2018
43
37

Ubiquitin is phosphorylated by PINK1 to activate parkin.
Fumika Koyano, Kei Okatsu, Hidetaka Kosako, Yasushi Tamura, Etsu Go, Mayumi Kimura, Yoko Kimura, Hikaru Tsuchiya, Hidehito Yoshihara, Takatsugu Hirokawa,[...]. Nature 2014
812
37

The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy.
Michael Lazarou, Danielle A Sliter, Lesley A Kane, Shireen A Sarraf, Chunxin Wang, Jonathon L Burman, Dionisia P Sideris, Adam I Fogel, Richard J Youle. Nature 2015
37

Essential role for Nix in autophagic maturation of erythroid cells.
Hector Sandoval, Perumal Thiagarajan, Swapan K Dasgupta, Armin Schumacher, Josef T Prchal, Min Chen, Jin Wang. Nature 2008
751
37

Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cells.
Lei Liu, Du Feng, Guo Chen, Ming Chen, Qiaoxia Zheng, Pingping Song, Qi Ma, Chongzhuo Zhu, Rui Wang, Wanjun Qi,[...]. Nat Cell Biol 2012
788
37

Measuring In Vivo Mitophagy.
Nuo Sun, Jeanho Yun, Jie Liu, Daniela Malide, Chengyu Liu, Ilsa I Rovira, Kira M Holmström, Maria M Fergusson, Young Hyun Yoo, Christian A Combs,[...]. Mol Cell 2015
325
25

Semi-automated quantitation of mitophagy in cells and tissues.
Lambert Montava-Garriga, François Singh, Graeme Ball, Ian G Ganley. Mech Ageing Dev 2020
8
25

HIF1α-dependent mitophagy facilitates cardiomyoblast differentiation.
Jin-Feng Zhao, Catherine E Rodger, George F G Allen, Simone Weidlich, Ian G Ganley. Cell Stress 2020
5
40

Dual role of USP30 in controlling basal pexophagy and mitophagy.
Elena Marcassa, Andreas Kallinos, Jane Jardine, Emma V Rusilowicz-Jones, Aitor Martinez, Sandra Kuehl, Markus Islinger, Michael J Clague, Sylvie Urbé. EMBO Rep 2018
62
25

The PINK1-Parkin pathway promotes both mitophagy and selective respiratory chain turnover in vivo.
Evelyn S Vincow, Gennifer Merrihew, Ruth E Thomas, Nicholas J Shulman, Richard P Beyer, Michael J MacCoss, Leo J Pallanck. Proc Natl Acad Sci U S A 2013
284
25

Autophagy accounts for approximately one-third of mitochondrial protein turnover and is protein selective.
Evelyn S Vincow, Ruth E Thomas, Gennifer E Merrihew, Nicholas J Shulman, Theo K Bammler, James W MacDonald, Michael J MacCoss, Leo J Pallanck. Autophagy 2019
19
25

Visualizing and Modulating Mitophagy for Therapeutic Studies of Neurodegeneration.
Hiroyuki Katayama, Hiroshi Hama, Koji Nagasawa, Hiroshi Kurokawa, Mayu Sugiyama, Ryoko Ando, Masaaki Funata, Nobuyo Yoshida, Misaki Homma, Takanori Nishimura,[...]. Cell 2020
30
25

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
25

Coordination of mitophagy and mitochondrial biogenesis during ageing in C. elegans.
Konstantinos Palikaras, Eirini Lionaki, Nektarios Tavernarakis. Nature 2015
353
25

Parkin is recruited selectively to impaired mitochondria and promotes their autophagy.
Derek Narendra, Atsushi Tanaka, Der-Fen Suen, Richard J Youle. J Cell Biol 2008
25

The role of autophagy during the early neonatal starvation period.
Akiko Kuma, Masahiko Hatano, Makoto Matsui, Akitsugu Yamamoto, Haruaki Nakaya, Tamotsu Yoshimori, Yoshinori Ohsumi, Takeshi Tokuhisa, Noboru Mizushima. Nature 2004
25

Outstanding Questions in Mitophagy: What We Do and Do Not Know.
Lambert Montava-Garriga, Ian G Ganley. J Mol Biol 2020
58
25

Proteasome and p97 mediate mitophagy and degradation of mitofusins induced by Parkin.
Atsushi Tanaka, Megan M Cleland, Shan Xu, Derek P Narendra, Der-Fen Suen, Mariusz Karbowski, Richard J Youle. J Cell Biol 2010
882
25

Organelle degradation in the lens by PLAAT phospholipases.
Hideaki Morishita, Tomoya Eguchi, Satoshi Tsukamoto, Yuriko Sakamaki, Satoru Takahashi, Chieko Saito, Ikuko Koyama-Honda, Noboru Mizushima. Nature 2021
10
25

A short linear motif in BNIP3L (NIX) mediates mitochondrial clearance in reticulocytes.
Ji Zhang, Melanie R Loyd, Mindy S Randall, M Brett Waddell, Richard W Kriwacki, Paul A Ney. Autophagy 2012
51
25

PINK1 phosphorylates ubiquitin to activate Parkin E3 ubiquitin ligase activity.
Lesley A Kane, Michael Lazarou, Adam I Fogel, Yan Li, Koji Yamano, Shireen A Sarraf, Soojay Banerjee, Richard J Youle. J Cell Biol 2014
679
25

Parkin protein deficiency exacerbates cardiac injury and reduces survival following myocardial infarction.
Dieter A Kubli, Xiaoxue Zhang, Youngil Lee, Rita A Hanna, Melissa N Quinsay, Christine K Nguyen, Rebecca Jimenez, Susanna Petrosyan, Anne N Murphy, Asa B Gustafsson. J Biol Chem 2013
276
25

Nix is a selective autophagy receptor for mitochondrial clearance.
Ivana Novak, Vladimir Kirkin, David G McEwan, Ji Zhang, Philipp Wild, Alexis Rozenknop, Vladimir Rogov, Frank Löhr, Doris Popovic, Angelo Occhipinti,[...]. EMBO Rep 2010
781
25

Mitochondrial clearance is regulated by Atg7-dependent and -independent mechanisms during reticulocyte maturation.
Ji Zhang, Mindy S Randall, Melanie R Loyd, Frank C Dorsey, Mondira Kundu, John L Cleveland, Paul A Ney. Blood 2009
166
25

A sensitive and quantitative technique for detecting autophagic events based on lysosomal delivery.
Hiroyuki Katayama, Takako Kogure, Noboru Mizushima, Tamotsu Yoshimori, Atsushi Miyawaki. Chem Biol 2011
317
25

Spatiotemporal Control of ULK1 Activation by NDP52 and TBK1 during Selective Autophagy.
Jose Norberto S Vargas, Chunxin Wang, Eric Bunker, Ling Hao, Dragan Maric, Giampietro Schiavo, Felix Randow, Richard J Youle. Mol Cell 2019
161
25

Comment on "mt-Keima detects PINK1-PRKN mitophagy in vivo with greater sensitivity than mito-QC".
Yi-Ting Liu, Danielle A Sliter, Mario K Shammas, Xiaoping Huang, Chunxin Wang, Hannah Calvelli, Dragan S Maric, Derek P Narendra. Autophagy 2021
2
100


Urolithin A induces mitophagy and prolongs lifespan in C. elegans and increases muscle function in rodents.
Dongryeol Ryu, Laurent Mouchiroud, Pénélope A Andreux, Elena Katsyuba, Norman Moullan, Amandine A Nicolet-Dit-Félix, Evan G Williams, Pooja Jha, Giuseppe Lo Sasso, Damien Huzard,[...]. Nat Med 2016
349
25

Parkin regulates mitophagy and mitochondrial function to protect against alcohol-induced liver injury and steatosis in mice.
Jessica A Williams, Hong-Min Ni, Yifeng Ding, Wen-Xing Ding. Am J Physiol Gastrointest Liver Physiol 2015
93
25

Quantitative proteomics reveal a feedforward mechanism for mitochondrial PARKIN translocation and ubiquitin chain synthesis.
Alban Ordureau, Shireen A Sarraf, David M Duda, Jin-Mi Heo, Mark P Jedrychowski, Vladislav O Sviderskiy, Jennifer L Olszewski, James T Koerber, Tiao Xie, Sean A Beausoleil,[...]. Mol Cell 2014
357
25

An alternative mitophagy pathway mediated by Rab9 protects the heart against ischemia.
Toshiro Saito, Jihoon Nah, Shin-Ichi Oka, Risa Mukai, Yoshiya Monden, Yasuhiro Maejima, Yoshiyuki Ikeda, Sebastiano Sciarretta, Tong Liu, Hong Li,[...]. J Clin Invest 2019
91
25

Mitochondrial Stasis Reveals p62-Mediated Ubiquitination in Parkin-Independent Mitophagy and Mitigates Nonalcoholic Fatty Liver Disease.
Tatsuya Yamada, Daisuke Murata, Yoshihiro Adachi, Kie Itoh, Shoichiro Kameoka, Atsushi Igarashi, Takashi Kato, Yoichi Araki, Richard L Huganir, Ted M Dawson,[...]. Cell Metab 2018
90
25

Mechanisms of mitophagy.
Richard J Youle, Derek P Narendra. Nat Rev Mol Cell Biol 2011
25

The ATG conjugation systems are important for degradation of the inner autophagosomal membrane.
Kotaro Tsuboyama, Ikuko Koyama-Honda, Yuriko Sakamaki, Masato Koike, Hideaki Morishita, Noboru Mizushima. Science 2016
253
25

NIX is required for programmed mitochondrial clearance during reticulocyte maturation.
Rachel L Schweers, Ji Zhang, Mindy S Randall, Melanie R Loyd, Weimin Li, Frank C Dorsey, Mondira Kundu, Joseph T Opferman, John L Cleveland, Jeffery L Miller,[...]. Proc Natl Acad Sci U S A 2007
584
25

Mitophagy inhibits amyloid-β and tau pathology and reverses cognitive deficits in models of Alzheimer's disease.
Evandro F Fang, Yujun Hou, Konstantinos Palikaras, Bryan A Adriaanse, Jesse S Kerr, Beimeng Yang, Sofie Lautrup, Md Mahdi Hasan-Olive, Domenica Caponio, Xiuli Dan,[...]. Nat Neurosci 2019
413
25

PINK1 stabilized by mitochondrial depolarization recruits Parkin to damaged mitochondria and activates latent Parkin for mitophagy.
Noriyuki Matsuda, Shigeto Sato, Kahori Shiba, Kei Okatsu, Keiko Saisho, Clement A Gautier, Yu-Shin Sou, Shinji Saiki, Sumihiro Kawajiri, Fumiaki Sato,[...]. J Cell Biol 2010
25

Hsp90-Cdc37 chaperone complex regulates Ulk1- and Atg13-mediated mitophagy.
Joung Hyuck Joo, Frank C Dorsey, Aashish Joshi, Kristin M Hennessy-Walters, Kristie L Rose, Kelly McCastlain, Ji Zhang, Rekha Iyengar, Chang Hwa Jung, Der-Fen Suen,[...]. Mol Cell 2011
144
25


Programmed mitophagy is essential for the glycolytic switch during cell differentiation.
Lorena Esteban-Martínez, Elena Sierra-Filardi, Rebecca S McGreal, María Salazar-Roa, Guillermo Mariño, Esther Seco, Sylvère Durand, David Enot, Osvaldo Graña, Marcos Malumbres,[...]. EMBO J 2017
145
25

Discovery of Atg5/Atg7-independent alternative macroautophagy.
Yuya Nishida, Satoko Arakawa, Kenji Fujitani, Hirofumi Yamaguchi, Takeshi Mizuta, Toku Kanaseki, Masaaki Komatsu, Kinya Otsu, Yoshihide Tsujimoto, Shigeomi Shimizu. Nature 2009
763
25

Mitophagy Is Essential for Maintaining Cardiac Function During High Fat Diet-Induced Diabetic Cardiomyopathy.
Mingming Tong, Toshiro Saito, Peiyong Zhai, Shin-Ichi Oka, Wataru Mizushima, Michinari Nakamura, Shohei Ikeda, Akihiro Shirakabe, Junichi Sadoshima. Circ Res 2019
112
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.