A citation-based method for searching scientific literature

Flore Sinturel, Pascal Gos, Volodymyr Petrenko, Claudia Hagedorn, Florian Kreppel, Kai-Florian Storch, Darko Knutti, Andre Liani, Charles Weitz, Yann Emmenegger, Paul Franken, Luigi Bonacina, Charna Dibner, Ueli Schibler. Genes Dev 2021
Times Cited: 32







List of co-cited articles
487 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



A circadian gene expression atlas in mammals: implications for biology and medicine.
Ray Zhang, Nicholas F Lahens, Heather I Ballance, Michael E Hughes, John B Hogenesch. Proc Natl Acad Sci U S A 2014
43

PERIOD2::LUCIFERASE real-time reporting of circadian dynamics reveals persistent circadian oscillations in mouse peripheral tissues.
Seung-Hee Yoo, Shin Yamazaki, Phillip L Lowrey, Kazuhiro Shimomura, Caroline H Ko, Ethan D Buhr, Sandra M Siepka, Hee-Kyung Hong, Won Jun Oh, Ook Joon Yoo,[...]. Proc Natl Acad Sci U S A 2004
43

Defining the Independence of the Liver Circadian Clock.
Kevin B Koronowski, Kenichiro Kinouchi, Patrick-Simon Welz, Jacob G Smith, Valentina M Zinna, Jiejun Shi, Muntaha Samad, Siwei Chen, Christophe N Magnan, Jason M Kinchen,[...]. Cell 2019
126
37

Entrainment of the circadian clock in the liver by feeding.
K A Stokkan, S Yamazaki, H Tei, Y Sakaki, M Menaker. Science 2001
37

Resetting of circadian time in peripheral tissues by glucocorticoid signaling.
A Balsalobre, S A Brown, L Marcacci, F Tronche, C Kellendonk, H M Reichardt, G Schütz, U Schibler. Science 2000
37


In vivo monitoring of peripheral circadian clocks in the mouse.
Yu Tahara, Hiroaki Kuroda, Keisuke Saito, Yoshihiro Nakajima, Yuji Kubo, Nobuaki Ohnishi, Yasuhiro Seo, Makiko Otsuka, Yuta Fuse, Yuki Ohura,[...]. Curr Biol 2012
130
31

Real-time recording of circadian liver gene expression in freely moving mice reveals the phase-setting behavior of hepatocyte clocks.
Camille Saini, André Liani, Thomas Curie, Pascal Gos, Florian Kreppel, Yann Emmenegger, Luigi Bonacina, Jean-Pierre Wolf, Yves-Alain Poget, Paul Franken,[...]. Genes Dev 2013
95
31

Temperature as a universal resetting cue for mammalian circadian oscillators.
Ethan D Buhr, Seung-Hee Yoo, Joseph S Takahashi. Science 2010
540
28

Insulin/IGF-1 Drives PERIOD Synthesis to Entrain Circadian Rhythms with Feeding Time.
Priya Crosby, Ryan Hamnett, Marrit Putker, Nathaniel P Hoyle, Martin Reed, Carolyn J Karam, Elizabeth S Maywood, Alessandra Stangherlin, Johanna E Chesham, Edward A Hayter,[...]. Cell 2019
131
28

The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator.
Nicolas Preitner, Francesca Damiola, Luis Lopez-Molina, Joszef Zakany, Denis Duboule, Urs Albrecht, Ueli Schibler. Cell 2002
25

Circadian gene expression in individual fibroblasts: cell-autonomous and self-sustained oscillators pass time to daughter cells.
Emi Nagoshi, Camille Saini, Christoph Bauer, Thierry Laroche, Felix Naef, Ueli Schibler. Cell 2004
703
25

The hepatocyte clock and feeding control chronophysiology of multiple liver cell types.
Dongyin Guan, Ying Xiong, Trang Minh Trinh, Yang Xiao, Wenxiang Hu, Chunjie Jiang, Pieterjan Dierickx, Cholsoon Jang, Joshua D Rabinowitz, Mitchell A Lazar. Science 2020
54
21

Reprogramming of the circadian clock by nutritional challenge.
Kristin L Eckel-Mahan, Vishal R Patel, Sara de Mateo, Ricardo Orozco-Solis, Nicholas J Ceglia, Saurabh Sahar, Sherry A Dilag-Penilla, Kenneth A Dyar, Pierre Baldi, Paolo Sassone-Corsi. Cell 2013
411
21

Molecular mechanisms and physiological importance of circadian rhythms.
Alina Patke, Michael W Young, Sofia Axelrod. Nat Rev Mol Cell Biol 2020
244
21


Clock-Talk: Interactions between Central and Peripheral Circadian Oscillators in Mammals.
Ueli Schibler, Ivana Gotic, Camille Saini, Pascal Gos, Thomas Curie, Yann Emmenegger, Flore Sinturel, Pauline Gosselin, Alan Gerber, Fabienne Fleury-Olela,[...]. Cold Spring Harb Symp Quant Biol 2015
158
18

Central and peripheral circadian clocks in mammals.
Jennifer A Mohawk, Carla B Green, Joseph S Takahashi. Annu Rev Neurosci 2012
18

Time of feeding and the intrinsic circadian clock drive rhythms in hepatic gene expression.
Christopher Vollmers, Shubhroz Gill, Luciano DiTacchio, Sandhya R Pulivarthy, Hiep D Le, Satchidananda Panda. Proc Natl Acad Sci U S A 2009
469
18

Role of the CLOCK protein in the mammalian circadian mechanism.
N Gekakis, D Staknis, H B Nguyen, F C Davis, L D Wilsbacher, D P King, J S Takahashi, C J Weitz. Science 1998
18

Phosphorylation Is a Central Mechanism for Circadian Control of Metabolism and Physiology.
Maria S Robles, Sean J Humphrey, Matthias Mann. Cell Metab 2017
196
18

Interacting molecular loops in the mammalian circadian clock.
L P Shearman, S Sriram, D R Weaver, E S Maywood, I Chaves, B Zheng, K Kume, C C Lee, G T van der Horst, M H Hastings,[...]. Science 2000
18

Diurnal transcriptome atlas of a primate across major neural and peripheral tissues.
Ludovic S Mure, Hiep D Le, Giorgia Benegiamo, Max W Chang, Luis Rios, Ngalla Jillani, Maina Ngotho, Thomas Kariuki, Ouria Dkhissi-Benyahya, Howard M Cooper,[...]. Science 2018
323
18

High-fat diet disrupts behavioral and molecular circadian rhythms in mice.
Akira Kohsaka, Aaron D Laposky, Kathryn Moynihan Ramsey, Carmela Estrada, Corinne Joshu, Yumiko Kobayashi, Fred W Turek, Joseph Bass. Cell Metab 2007
967
18

Resetting central and peripheral circadian oscillators in transgenic rats.
S Yamazaki, R Numano, M Abe, A Hida, R Takahashi, M Ueda, G D Block, Y Sakaki, M Menaker, H Tei. Science 2000
18

Clock mutants of Drosophila melanogaster.
R J Konopka, S Benzer. Proc Natl Acad Sci U S A 1971
18

Positional cloning of the mouse circadian clock gene.
D P King, Y Zhao, A M Sangoram, L D Wilsbacher, M Tanaka, M P Antoch, T D Steeves, M H Vitaterna, J M Kornhauser, P L Lowrey,[...]. Cell 1997
18


Physiological significance of a peripheral tissue circadian clock.
Katja A Lamia, Kai-Florian Storch, Charles J Weitz. Proc Natl Acad Sci U S A 2008
721
15

A database of tissue-specific rhythmically expressed human genes has potential applications in circadian medicine.
Marc D Ruben, Gang Wu, David F Smith, Robert E Schmidt, Lauren J Francey, Yin Yeng Lee, Ron C Anafi, John B Hogenesch. Sci Transl Med 2018
113
15

System-driven and oscillator-dependent circadian transcription in mice with a conditionally active liver clock.
Benoît Kornmann, Olivier Schaad, Hermann Bujard, Joseph S Takahashi, Ueli Schibler. PLoS Biol 2007
474
15

Rhythms of mammalian body temperature can sustain peripheral circadian clocks.
Steven A Brown, Gottlieb Zumbrunn, Fabienne Fleury-Olela, Nicolas Preitner, Ueli Schibler. Curr Biol 2002
365
15

Control of mammalian circadian rhythm by CKIepsilon-regulated proteasome-mediated PER2 degradation.
Erik J Eide, Margaret F Woolf, Heeseog Kang, Peter Woolf, William Hurst, Fernando Camacho, Erica L Vielhaber, Andrew Giovanni, David M Virshup. Mol Cell Biol 2005
354
15

Cryptochromes mediate rhythmic repression of the glucocorticoid receptor.
Katja A Lamia, Stephanie J Papp, Ruth T Yu, Grant D Barish, N Henriette Uhlenhaut, Johan W Jonker, Michael Downes, Ronald M Evans. Nature 2011
371
15

Circadian Homeostasis of Liver Metabolism Suppresses Hepatocarcinogenesis.
Nicole M Kettner, Horatio Voicu, Milton J Finegold, Cristian Coarfa, Arun Sreekumar, Nagireddy Putluri, Chinenye A Katchy, Choogon Lee, David D Moore, Loning Fu. Cancer Cell 2016
226
15

The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control.
Yasukazu Nakahata, Milota Kaluzova, Benedetto Grimaldi, Saurabh Sahar, Jun Hirayama, Danica Chen, Leonard P Guarente, Paolo Sassone-Corsi. Cell 2008
962
15

Circadian Reprogramming in the Liver Identifies Metabolic Pathways of Aging.
Shogo Sato, Guiomar Solanas, Francisca Oliveira Peixoto, Leonardo Bee, Aikaterini Symeonidi, Mark S Schmidt, Charles Brenner, Selma Masri, Salvador Aznar Benitah, Paolo Sassone-Corsi. Cell 2017
175
15

Systematic analysis of differential rhythmic liver gene expression mediated by the circadian clock and feeding rhythms.
Benjamin D Weger, Cédric Gobet, Fabrice P A David, Florian Atger, Eva Martin, Nicholas E Phillips, Aline Charpagne, Meltem Weger, Felix Naef, Frédéric Gachon. Proc Natl Acad Sci U S A 2021
30
16

Bioluminescence imaging of individual fibroblasts reveals persistent, independently phased circadian rhythms of clock gene expression.
David K Welsh, Seung-Hee Yoo, Andrew C Liu, Joseph S Takahashi, Steve A Kay. Curr Biol 2004
480
15

A genome-wide RNAi screen for modifiers of the circadian clock in human cells.
Eric E Zhang, Andrew C Liu, Tsuyoshi Hirota, Loren J Miraglia, Genevieve Welch, Pagkapol Y Pongsawakul, Xianzhong Liu, Ann Atwood, Jon W Huss, Jeff Janes,[...]. Cell 2009
306
15

Circadian time signatures of fitness and disease.
Joseph Bass, Mitchell A Lazar. Science 2016
304
15

The circadian gene Period2 plays an important role in tumor suppression and DNA damage response in vivo.
Loning Fu, Helene Pelicano, Jinsong Liu, Peng Huang, Cheng Lee. Cell 2002
920
15

Intercellular coupling confers robustness against mutations in the SCN circadian clock network.
Andrew C Liu, David K Welsh, Caroline H Ko, Hien G Tran, Eric E Zhang, Aaron A Priest, Ethan D Buhr, Oded Singer, Kirsten Meeker, Inder M Verma,[...]. Cell 2007
505
15

Transplanted suprachiasmatic nucleus determines circadian period.
M R Ralph, R G Foster, F C Davis, M Menaker. Science 1990
15

Glucocorticoid hormones inhibit food-induced phase-shifting of peripheral circadian oscillators.
N Le Minh, F Damiola, F Tronche, G Schütz, U Schibler. EMBO J 2001
350
15


SIRT1 regulates circadian clock gene expression through PER2 deacetylation.
Gad Asher, David Gatfield, Markus Stratmann, Hans Reinke, Charna Dibner, Florian Kreppel, Raul Mostoslavsky, Frederick W Alt, Ueli Schibler. Cell 2008
925
15

Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β.
Han Cho, Xuan Zhao, Megumi Hatori, Ruth T Yu, Grant D Barish, Michael T Lam, Ling-Wa Chong, Luciano DiTacchio, Annette R Atkins, Christopher K Glass,[...]. Nature 2012
675
15

Circadian Mechanisms in Medicine.
Ravi Allada, Joseph Bass. N Engl J Med 2021
110
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.