A citation-based method for searching scientific literature

Kazuki Obashi, Justin W Taraska, Shigeo Okabe. J Gen Physiol 2021
Times Cited: 5







List of co-cited articles
21 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Spatial Transcriptomics: Molecular Maps of the Mammalian Brain.
Cantin Ortiz, Marie Carlén, Konstantinos Meletis. Annu Rev Neurosci 2021
9
40

Tissue clearing and its applications in neuroscience.
Hiroki R Ueda, Ali Ertürk, Kwanghun Chung, Viviana Gradinaru, Alain Chédotal, Pavel Tomancak, Philipp J Keller. Nat Rev Neurosci 2020
146
40

A community-based transcriptomics classification and nomenclature of neocortical cell types.
Rafael Yuste, Michael Hawrylycz, Nadia Aalling, Argel Aguilar-Valles, Detlev Arendt, Ruben Armañanzas, Giorgio A Ascoli, Concha Bielza, Vahid Bokharaie, Tobias Borgtoft Bergmann,[...]. Nat Neurosci 2020
67
40

Reconstruction of 1,000 Projection Neurons Reveals New Cell Types and Organization of Long-Range Connectivity in the Mouse Brain.
Johan Winnubst, Erhan Bas, Tiago A Ferreira, Zhuhao Wu, Michael N Economo, Patrick Edson, Ben J Arthur, Christopher Bruns, Konrad Rokicki, David Schauder,[...]. Cell 2019
129
40


Genetic Dissection of Neural Circuits: A Decade of Progress.
Liqun Luo, Edward M Callaway, Karel Svoboda. Neuron 2018
154
40

Saturated Reconstruction of a Volume of Neocortex.
Narayanan Kasthuri, Kenneth Jeffrey Hayworth, Daniel Raimund Berger, Richard Lee Schalek, José Angel Conchello, Seymour Knowles-Barley, Dongil Lee, Amelio Vázquez-Reina, Verena Kaynig, Thouis Raymond Jones,[...]. Cell 2015
431
40

Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain.
Hiroshi Hama, Hiroshi Kurokawa, Hiroyuki Kawano, Ryoko Ando, Tomomi Shimogori, Hisayori Noda, Kiyoko Fukami, Asako Sakaue-Sawano, Atsushi Miyawaki. Nat Neurosci 2011
740
40

Imaging neuronal subsets in transgenic mice expressing multiple spectral variants of GFP.
G Feng, R H Mellor, M Bernstein, C Keller-Peck, Q T Nguyen, M Wallace, J M Nerbonne, J W Lichtman, J R Sanes. Neuron 2000
40

Modeling autism by SHANK gene mutations in mice.
Yong-Hui Jiang, Michael D Ehlers. Neuron 2013
292
40

Miniaturized integration of a fluorescence microscope.
Kunal K Ghosh, Laurie D Burns, Eric D Cocker, Axel Nimmerjahn, Yaniv Ziv, Abbas El Gamal, Mark J Schnitzer. Nat Methods 2011
477
40


High-throughput synapse-resolving two-photon fluorescence microendoscopy for deep-brain volumetric imaging in vivo.
Guanghan Meng, Yajie Liang, Sarah Sarsfield, Wan-Chen Jiang, Rongwen Lu, Joshua Tate Dudman, Yeka Aponte, Na Ji. Elife 2019
41
40

Computational geometry analysis of dendritic spines by structured illumination microscopy.
Yutaro Kashiwagi, Takahito Higashi, Kazuki Obashi, Yuka Sato, Noboru H Komiyama, Seth G N Grant, Shigeo Okabe. Nat Commun 2019
18
40

Super-Resolution Imaging of the Extracellular Space in Living Brain Tissue.
Jan Tønnesen, V V G Krishna Inavalli, U Valentin Nägerl. Cell 2018
110
40

Dendritic Spine and Synaptic Plasticity in Alzheimer's Disease: A Focus on MicroRNA.
Edwin Estefan Reza-Zaldivar, Mercedes Azucena Hernández-Sápiens, Benito Minjarez, Ulises Gómez-Pinedo, Victor Javier Sánchez-González, Ana Laura Márquez-Aguirre, Alejandro Arturo Canales-Aguirre. Front Cell Dev Biol 2020
19
40

Ultrastructure of dendritic spines: correlation between synaptic and spine morphologies.
Jon I Arellano, Ruth Benavides-Piccione, Javier Defelipe, Rafael Yuste. Front Neurosci 2007
305
40

Quantification of Dendritic Spines Remodeling under Physiological Stimuli and in Pathological Conditions.
Ewa Bączyńska, Katarzyna Karolina Pels, Subhadip Basu, Jakub Włodarczyk, Błażej Ruszczycki. Int J Mol Sci 2021
5
40

Neuronal plasticity affects correlation between the size of dendritic spine and its postsynaptic density.
Malgorzata Borczyk, Małgorzata Alicja Śliwińska, Anna Caly, Tytus Bernas, Kasia Radwanska. Sci Rep 2019
31
40

Sampling issues in quantitative analysis of dendritic spines morphology.
Błażej Ruszczycki, Zsuzsanna Szepesi, Grzegorz M Wilczynski, Monika Bijata, Katarzyna Kalita, Leszek Kaczmarek, Jakub Wlodarczyk. BMC Bioinformatics 2012
46
40

Transgenic strategies for combinatorial expression of fluorescent proteins in the nervous system.
Jean Livet, Tamily A Weissman, Hyuno Kang, Ryan W Draft, Ju Lu, Robyn A Bennis, Joshua R Sanes, Jeff W Lichtman. Nature 2007
20

Network anatomy and in vivo physiology of visual cortical neurons.
Davi D Bock, Wei-Chung Allen Lee, Aaron M Kerlin, Mark L Andermann, Greg Hood, Arthur W Wetzel, Sergey Yurgenson, Edward R Soucy, Hyon Suk Kim, R Clay Reid. Nature 2011
488
20

Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.
Hans-Ulrich Dodt, Ulrich Leischner, Anja Schierloh, Nina Jährling, Christoph Peter Mauch, Katrin Deininger, Jan Michael Deussing, Matthias Eder, Walter Zieglgänsberger, Klaus Becker. Nat Methods 2007
707
20

Single-Cell Transcriptomics Meets Lineage Tracing.
Lennart Kester, Alexander van Oudenaarden. Cell Stem Cell 2018
173
20

CATMAID: collaborative annotation toolkit for massive amounts of image data.
Stephan Saalfeld, Albert Cardona, Volker Hartenstein, Pavel Tomancak. Bioinformatics 2009
149
20

Clonally related visual cortical neurons show similar stimulus feature selectivity.
Ye Li, Hui Lu, Pei-lin Cheng, Shaoyu Ge, Huatai Xu, Song-Hai Shi, Yang Dan. Nature 2012
152
20

Wiring specificity in the direction-selectivity circuit of the retina.
Kevin L Briggman, Moritz Helmstaedter, Winfried Denk. Nature 2011
494
20

Panoptic imaging of transparent mice reveals whole-body neuronal projections and skull-meninges connections.
Ruiyao Cai, Chenchen Pan, Alireza Ghasemigharagoz, Mihail Ivilinov Todorov, Benjamin Förstera, Shan Zhao, Harsharan S Bhatia, Arnaldo Parra-Damas, Leander Mrowka, Delphine Theodorou,[...]. Nat Neurosci 2019
144
20

Fluorescence nanoscopy in cell biology.
Steffen J Sahl, Stefan W Hell, Stefan Jakobs. Nat Rev Mol Cell Biol 2017
370
20

Cre reporter strains produced by targeted insertion of EYFP and ECFP into the ROSA26 locus.
S Srinivas, T Watanabe, C S Lin, C M William, Y Tanabe, T M Jessell, F Costantini. BMC Dev Biol 2001
20

Cortical response selectivity derives from strength in numbers of synapses.
Benjamin Scholl, Connon I Thomas, Melissa A Ryan, Naomi Kamasawa, David Fitzpatrick. Nature 2021
14
20

High-accuracy neurite reconstruction for high-throughput neuroanatomy.
Moritz Helmstaedter, Kevin L Briggman, Winfried Denk. Nat Neurosci 2011
153
20

Postnatal connectomic development of inhibition in mouse barrel cortex.
Anjali Gour, Kevin M Boergens, Natalie Heike, Yunfeng Hua, Philip Laserstein, Kun Song, Moritz Helmstaedter. Science 2021
12
20

Structural and molecular interrogation of intact biological systems.
Kwanghun Chung, Jenelle Wallace, Sung-Yon Kim, Sandhiya Kalyanasundaram, Aaron S Andalman, Thomas J Davidson, Julie J Mirzabekov, Kelly A Zalocusky, Joanna Mattis, Aleksandra K Denisin,[...]. Nature 2013
20

Progress and remaining challenges in high-throughput volume electron microscopy.
Jörgen Kornfeld, Winfried Denk. Curr Opin Neurobiol 2018
41
20

Cortical column and whole-brain imaging with molecular contrast and nanoscale resolution.
Ruixuan Gao, Shoh M Asano, Srigokul Upadhyayula, Igor Pisarev, Daniel E Milkie, Tsung-Li Liu, Ved Singh, Austin Graves, Grace H Huynh, Yongxin Zhao,[...]. Science 2019
138
20

A platform for brain-wide imaging and reconstruction of individual neurons.
Michael N Economo, Nathan G Clack, Luke D Lavis, Charles R Gerfen, Karel Svoboda, Eugene W Myers, Jayaram Chandrashekar. Elife 2016
198
20

Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq.
Amit Zeisel, Ana B Muñoz-Manchado, Simone Codeluppi, Peter Lönnerberg, Gioele La Manno, Anna Juréus, Sueli Marques, Hermany Munguba, Liqun He, Christer Betsholtz,[...]. Science 2015
20

In situ sequencing for RNA analysis in preserved tissue and cells.
Rongqin Ke, Marco Mignardi, Alexandra Pacureanu, Jessica Svedlund, Johan Botling, Carolina Wählby, Mats Nilsson. Nat Methods 2013
317
20

Optimizing retroviral gene expression for effective therapies.
Michael N Antoniou, Kristian Alsbjerg Skipper, Omer Anakok. Hum Gene Ther 2013
34
20


RNA imaging. Spatially resolved, highly multiplexed RNA profiling in single cells.
Kok Hao Chen, Alistair N Boettiger, Jeffrey R Moffitt, Siyuan Wang, Xiaowei Zhuang. Science 2015
780
20

ScaleS: an optical clearing palette for biological imaging.
Hiroshi Hama, Hiroyuki Hioki, Kana Namiki, Tetsushi Hoshida, Hiroshi Kurokawa, Fumiyoshi Ishidate, Takeshi Kaneko, Takumi Akagi, Takashi Saito, Takaomi Saido,[...]. Nat Neurosci 2015
306
20

Ultrastructural analysis of hippocampal neuropil from the connectomics perspective.
Yuriy Mishchenko, Tao Hu, Josef Spacek, John Mendenhall, Kristen M Harris, Dmitri B Chklovskii. Neuron 2010
176
20

Deterministic progenitor behavior and unitary production of neurons in the neocortex.
Peng Gao, Maria Pia Postiglione, Teresa G Krieger, Luisirene Hernandez, Chao Wang, Zhi Han, Carmen Streicher, Ekaterina Papusheva, Ryan Insolera, Kritika Chugh,[...]. Cell 2014
227
20



The IRG mouse: a two-color fluorescent reporter for assessing Cre-mediated recombination and imaging complex cellular relationships in situ.
Rita De Gasperi, Anne B Rocher, Miguel A Gama Sosa, Susan L Wearne, Gissel M Perez, Victor L Friedrich, Patrick R Hof, Gregory A Elder. Genesis 2008
37
20

Improved reporter strain for monitoring Cre recombinase-mediated DNA excisions in mice.
X Mao, Y Fujiwara, S H Orkin. Proc Natl Acad Sci U S A 1999
276
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.