A citation-based method for searching scientific literature

Vanessa Meier-Stephenson, Maulik D Badmalia, Tyler Mrozowich, Keith C K Lau, Sarah K Schultz, Darren L Gemmill, Carla Osiowy, Guido van Marle, Carla S Coffin, Trushar R Patel. J Biol Chem 2021
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The conserved mosaic prophage protein paratox inhibits the natural competence regulator ComR in Streptococcus.
Lauren Mashburn-Warren, Steven D Goodman, Michael J Federle, Gerd Prehna. Sci Rep 2018
6
100

Structural and Hydrodynamic Characterization of Dimeric Human Oligoadenylate Synthetase 2.
Amit Koul, Darren Gemmill, Nikhat Lubna, Markus Meier, Natalie Krahn, Evan P Booy, Jörg Stetefeld, Trushar R Patel, Sean A McKenna. Biophys J 2020
1
100

Identification of competence pheromone responsive genes in Streptococcus pneumoniae by use of DNA microarrays.
Scott N Peterson, Chang Kyoo Sung, Robin Cline, Bhushan V Desai, Erik C Snesrud, Ping Luo, Jennifer Walling, Haiying Li, Michelle Mintz, Getahun Tsegaye,[...]. Mol Microbiol 2004
262
100

Structural characterization of the virulence factor Sda1 nuclease from Streptococcus pyogenes.
Andrea F Moon, Juno M Krahn, Xun Lu, Matthew J Cuneo, Lars C Pedersen. Nucleic Acids Res 2016
8
100

A phage-encoded anti-activator inhibits quorum sensing in Pseudomonas aeruginosa.
Megha Shah, Véronique L Taylor, Diane Bona, Yvonne Tsao, Sabrina Y Stanley, Sheila M Pimentel-Elardo, Matthew McCallum, Joseph Bondy-Denomy, P Lynne Howell, Justin R Nodwell,[...]. Mol Cell 2021
10
100

Bacteriophage-mediated spread of bacterial virulence genes.
José R Penadés, John Chen, Nuria Quiles-Puchalt, Nuria Carpena, Richard P Novick. Curr Opin Microbiol 2015
146
100

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
100

Bacteriophage protein-protein interactions.
Roman Häuser, Sonja Blasche, Terje Dokland, Elisabeth Haggård-Ljungquist, Albrecht von Brunn, Margarita Salas, Sherwood Casjens, Ian Molineux, Peter Uetz. Adv Virus Res 2012
42
100

REFMAC5 for the refinement of macromolecular crystal structures.
Garib N Murshudov, Pavol Skubák, Andrey A Lebedev, Navraj S Pannu, Roberto A Steiner, Robert A Nicholls, Martyn D Winn, Fei Long, Alexei A Vagin. Acta Crystallogr D Biol Crystallogr 2011
100


Structure-function studies of Rgg binding to pheromones and target promoters reveal a model of transcription factor interplay.
Glenn C Capodagli, Kaitlyn M Tylor, Jason T Kaelber, Vasileios I Petrou, Michael J Federle, Matthew B Neiditch. Proc Natl Acad Sci U S A 2020
2
100

Genome sequence of a serotype M3 strain of group A Streptococcus: phage-encoded toxins, the high-virulence phenotype, and clone emergence.
Stephen B Beres, Gail L Sylva, Kent D Barbian, Benfang Lei, Jessica S Hoff, Nicole D Mammarella, Meng-Yao Liu, James C Smoot, Stephen F Porcella, Larye D Parkins,[...]. Proc Natl Acad Sci U S A 2002
364
100

Bacterial transformation: distribution, shared mechanisms and divergent control.
Calum Johnston, Bernard Martin, Gwennaele Fichant, Patrice Polard, Jean-Pierre Claverys. Nat Rev Microbiol 2014
294
100

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
100


Gene expression analysis of the Streptococcus pneumoniae competence regulons by use of DNA microarrays.
S Peterson, R T Cline, H Tettelin, V Sharov, D A Morrison. J Bacteriol 2000
123
100

A competence regulon in Streptococcus pneumoniae revealed by genomic analysis.
E A Campbell, S Y Choi, H R Masure. Mol Microbiol 1998
110
100

Overview of the CCP4 suite and current developments.
Martyn D Winn, Charles C Ballard, Kevin D Cowtan, Eleanor J Dodson, Paul Emsley, Phil R Evans, Ronan M Keegan, Eugene B Krissinel, Andrew G W Leslie, Airlie McCoy,[...]. Acta Crystallogr D Biol Crystallogr 2011
100

Pheromone Recognition and Selectivity by ComR Proteins among Streptococcus Species.
Erin Shanker, Donald A Morrison, Antoine Talagas, Sylvie Nessler, Michael J Federle, Gerd Prehna. PLoS Pathog 2016
32
100

ATSAS 3.0: expanded functionality and new tools for small-angle scattering data analysis.
Karen Manalastas-Cantos, Petr V Konarev, Nelly R Hajizadeh, Alexey G Kikhney, Maxim V Petoukhov, Dmitry S Molodenskiy, Alejandro Panjkovich, Haydyn D T Mertens, Andrey Gruzinov, Clemente Borges,[...]. J Appl Crystallogr 2021
50
100

Regulation of competence for natural transformation in streptococci.
Laetitia Fontaine, Astrid Wahl, Maud Fléchard, Johann Mignolet, Pascal Hols. Infect Genet Evol 2015
65
100

Group a streptococcal diseases and their global burden.
Anna P Ralph, Jonathan R Carapetis. Curr Top Microbiol Immunol 2013
176
100


A novel double-tryptophan peptide pheromone controls competence in Streptococcus spp. via an Rgg regulator.
Lauren Mashburn-Warren, Donald A Morrison, Michael J Federle. Mol Microbiol 2010
205
100


Streptococcus pyogenes biofilm growth in vitro and in vivo and its role in colonization, virulence, and genetic exchange.
Laura R Marks, Lauren Mashburn-Warren, Michael J Federle, Anders P Hakansson. J Infect Dis 2014
66
100


Targeted Curing of All Lysogenic Bacteriophage from Streptococcus pyogenes Using a Novel Counter-selection Technique.
Chad W Euler, Barbara Juncosa, Patricia A Ryan, Douglas R Deutsch, W Michael McShan, Vincent A Fischetti. PLoS One 2016
14
100

86
100

A novel pheromone quorum-sensing system controls the development of natural competence in Streptococcus thermophilus and Streptococcus salivarius.
Laetitia Fontaine, Céline Boutry, Marie Henry de Frahan, Brigitte Delplace, Christophe Fremaux, Philippe Horvath, Patrick Boyaval, Pascal Hols. J Bacteriol 2010
137
100

Epidemiology and distribution of 10 superantigens among invasive Streptococcus pyogenes disease in Germany from 2009 to 2014.
Matthias Imöhl, Christina Fitzner, Stephanie Perniciaro, Mark van der Linden. PLoS One 2017
22
100

Genetic and Structural Analyses of RRNPP Intercellular Peptide Signaling of Gram-Positive Bacteria.
Matthew B Neiditch, Glenn C Capodagli, Gerd Prehna, Michael J Federle. Annu Rev Genet 2017
53
100


Features and development of Coot.
P Emsley, B Lohkamp, W G Scott, K Cowtan. Acta Crystallogr D Biol Crystallogr 2010
100

XDS.
Wolfgang Kabsch. Acta Crystallogr D Biol Crystallogr 2010
100

Structural Insights into Streptococcal Competence Regulation by the Cell-to-Cell Communication System ComRS.
Antoine Talagas, Laetitia Fontaine, Laura Ledesma-García, Johann Mignolet, Inès Li de la Sierra-Gallay, Noureddine Lazar, Magali Aumont-Nicaise, Michael J Federle, Gerd Prehna, Pascal Hols,[...]. PLoS Pathog 2016
26
100

Multiple length peptide-pheromone variants produced by Streptococcus pyogenes directly bind Rgg proteins to confer transcriptional regulation.
Chaitanya Aggarwal, Juan Cristobal Jimenez, Dhaval Nanavati, Michael J Federle. J Biol Chem 2014
31
100

The cryptic competence pathway in Streptococcus pyogenes is controlled by a peptide pheromone.
Lauren Mashburn-Warren, Donald A Morrison, Michael J Federle. J Bacteriol 2012
58
100

Zinc-finger protein CNBP alters the 3-D structure of lncRNA Braveheart in solution.
Doo Nam Kim, Bernhard C Thiel, Tyler Mrozowich, Scott P Hennelly, Ivo L Hofacker, Trushar R Patel, Karissa Y Sanbonmatsu. Nat Commun 2020
28
100

Necrotising fasciitis.
Jason Diab, Aiveen Bannan, Timothy Pollitt. BMJ 2020
4
100

A phage protein that inhibits the bacterial ATPase required for type IV pilus assembly.
In-Young Chung, Hye-Jeong Jang, Hee-Won Bae, You-Hee Cho. Proc Natl Acad Sci U S A 2014
34
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.