A citation-based method for searching scientific literature

Z W Kockler, B Osia, R Lee, K Musmaker, A Malkova. Annu Rev Biochem 2021
Times Cited: 2







List of co-cited articles
4 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast.
Grzegorz Ira, Anna Malkova, Giordano Liberi, Marco Foiani, James E Haber. Cell 2003
448
100

RPA coordinates DNA end resection and prevents formation of DNA hairpins.
Huan Chen, Michael Lisby, Lorraine S Symington. Mol Cell 2013
137
100

Dynamic Processing of Displacement Loops during Recombinational DNA Repair.
Aurèle Piazza, Shanaya Shital Shah, William Douglass Wright, Steven K Gore, Romain Koszul, Wolf-Dietrich Heyer. Mol Cell 2019
37
100

Top3-Rmi1 dissolve Rad51-mediated D loops by a topoisomerase-based mechanism.
Clare L Fasching, Petr Cejka, Stephen C Kowalczykowski, Wolf-Dietrich Heyer. Mol Cell 2015
70
100

Warsaw Breakage Syndrome associated DDX11 helicase resolves G-quadruplex structures to support sister chromatid cohesion.
Janne J M van Schie, Atiq Faramarz, Jesper A Balk, Grant S Stewart, Erika Cantelli, Anneke B Oostra, Martin A Rooimans, Joanna L Parish, Cynthia de Almeida Estéves, Katja Dumic,[...]. Nat Commun 2020
8
50

Smc5/6 functions with Sgs1-Top3-Rmi1 to complete chromosome replication at natural pause sites.
Sumedha Agashe, Chinnu Rose Joseph, Teresa Anne Clarisse Reyes, Demis Menolfi, Michele Giannattasio, Anja Waizenegger, Barnabas Szakal, Dana Branzei. Nat Commun 2021
1
100


Phosphoproteomics reveals a distinctive Mec1/ATR signaling response upon DNA end hyper-resection.
Ethan J Sanford, William J Comstock, Vitor M Faça, Stephanie C Vega, Robert Gnügge, Lorraine S Symington, Marcus B Smolka. EMBO J 2021
3
50

Repeat expansions confer WRN dependence in microsatellite-unstable cancers.
Niek van Wietmarschen, Sriram Sridharan, William J Nathan, Anthony Tubbs, Edmond M Chan, Elsa Callen, Wei Wu, Frida Belinky, Veenu Tripathi, Nancy Wong,[...]. Nature 2020
12
50

The 9-1-1 Complex Controls Mre11 Nuclease and Checkpoint Activation during Short-Range Resection of DNA Double-Strand Breaks.
Elisa Gobbini, Erika Casari, Chiara Vittoria Colombo, Diego Bonetti, Maria Pia Longhese. Cell Rep 2020
3
50

Mus81-Mms4 endonuclease is an Esc2-STUbL-Cullin8 mitotic substrate impacting on genome integrity.
Anja Waizenegger, Madhusoodanan Urulangodi, Carl P Lehmann, Teresa Anne Clarisse Reyes, Irene Saugar, José Antonio Tercero, Barnabas Szakal, Dana Branzei. Nat Commun 2020
7
50

Replication Gaps Underlie BRCA Deficiency and Therapy Response.
Nicholas J Panzarino, John J Krais, Ke Cong, Min Peng, Michelle Mosqueda, Sumeet U Nayak, Samuel M Bond, Jennifer A Calvo, Mihir B Doshi, Matt Bere,[...]. Cancer Res 2021
15
50

Holliday junction resolution: regulation in space and time.
Joao Matos, Stephen C West. DNA Repair (Amst) 2014
91
50


The plasticity of DNA replication forks in response to clinically relevant genotoxic stress.
Matteo Berti, David Cortez, Massimo Lopes. Nat Rev Mol Cell Biol 2020
32
50

Cohesin association to replication sites depends on rad50 and promotes fork restart.
Mireille Tittel-Elmer, Armelle Lengronne, Marta B Davidson, Julien Bacal, Philippe François, Marcel Hohl, John H J Petrini, Philippe Pasero, Jennifer A Cobb. Mol Cell 2012
79
50

FANCJ helicase controls the balance between short- and long-tract gene conversions between sister chromatids.
Sarmi Nath, Kumar Somyajit, Anup Mishra, Ralph Scully, Ganesh Nagaraju. Nucleic Acids Res 2017
7
50

Phosphorylation of the RecQ Helicase Sgs1/BLM Controls Its DNA Unwinding Activity during Meiosis and Mitosis.
Rokas Grigaitis, Lepakshi Ranjha, Philipp Wild, Kristina Kasaciunaite, Ilaria Ceppi, Vera Kissling, Adrian Henggeler, Aitor Susperregui, Matthias Peter, Ralf Seidel,[...]. Dev Cell 2020
6
50

RAD51 Gene Family Structure and Function.
Braulio Bonilla, Sarah R Hengel, McKenzie K Grundy, Kara A Bernstein. Annu Rev Genet 2020
14
50

RNA polymerase III is required for the repair of DNA double-strand breaks by homologous recombination.
Sijie Liu, Yu Hua, Jingna Wang, Lingyan Li, Junjie Yuan, Bo Zhang, Ziyang Wang, Jianguo Ji, Daochun Kong. Cell 2021
12
50

Mechanism of eukaryotic homologous recombination.
Joseph San Filippo, Patrick Sung, Hannah Klein. Annu Rev Biochem 2008
998
50


Regulatory control of Sgs1 and Dna2 during eukaryotic DNA end resection.
Chaoyou Xue, Weibin Wang, J Brooks Crickard, Corentin J Moevus, Youngho Kwon, Patrick Sung, Eric C Greene. Proc Natl Acad Sci U S A 2019
18
50

The RecQ helicase Sgs1 drives ATP-dependent disruption of Rad51 filaments.
J Brooks Crickard, Chaoyou Xue, Weibin Wang, Youngho Kwon, Patrick Sung, Eric C Greene. Nucleic Acids Res 2019
12
50

Rad9/53BP1 promotes DNA repair via crossover recombination by limiting the Sgs1 and Mph1 helicases.
Matteo Ferrari, Chetan C Rawal, Samuele Lodovichi, Maria Y Vietri, Achille Pellicioli. Nat Commun 2020
6
50

Helicase Mechanisms During Homologous Recombination in Saccharomyces cerevisiae.
J Brooks Crickard, Eric C Greene. Annu Rev Biophys 2019
10
50

Helicases FANCJ, RTEL1 and BLM Act on Guanine Quadruplex DNA in Vivo.
Peter Lansdorp, Niek van Wietmarschen. Genes (Basel) 2019
10
50

Error-free DNA damage tolerance and sister chromatid proximity during DNA replication rely on the Polα/Primase/Ctf4 Complex.
Marco Fumasoni, Katharina Zwicky, Fabio Vanoli, Massimo Lopes, Dana Branzei. Mol Cell 2015
82
50

Essential Roles of the Smc5/6 Complex in Replication through Natural Pausing Sites and Endogenous DNA Damage Tolerance.
Demis Menolfi, Axel Delamarre, Armelle Lengronne, Philippe Pasero, Dana Branzei. Mol Cell 2015
66
50

Sgs1's roles in DNA end resection, HJ dissolution, and crossover suppression require a two-step SUMO regulation dependent on Smc5/6.
Marcelino Bermúdez-López, María Teresa Villoria, Miguel Esteras, Adam Jarmuz, Jordi Torres-Rosell, Andres Clemente-Blanco, Luis Aragon. Genes Dev 2016
33
50

Senataxin Ortholog Sen1 Limits DNA:RNA Hybrid Accumulation at DNA Double-Strand Breaks to Control End Resection and Repair Fidelity.
Chetan C Rawal, Luca Zardoni, Matteo Di Terlizzi, Elena Galati, Alessandra Brambati, Federico Lazzaro, Giordano Liberi, Achille Pellicioli. Cell Rep 2020
9
50


Rad52 Restrains Resection at DNA Double-Strand Break Ends in Yeast.
Zhenxin Yan, Chaoyou Xue, Sandeep Kumar, J Brooks Crickard, Yang Yu, Weibin Wang, Nhung Pham, Yuxi Li, Hengyao Niu, Patrick Sung,[...]. Mol Cell 2019
13
50

Specificity of end resection pathways for double-strand break regions containing ribonucleotides and base lesions.
James M Daley, Nozomi Tomimatsu, Grace Hooks, Weibin Wang, Adam S Miller, Xiaoyu Xue, Kevin A Nguyen, Hardeep Kaur, Elizabeth Williamson, Bipasha Mukherjee,[...]. Nat Commun 2020
8
50

MRX Increases Chromatin Accessibility at Stalled Replication Forks to Promote Nascent DNA Resection and Cohesin Loading.
Axel Delamarre, Antoine Barthe, Christophe de la Roche Saint-André, Pierre Luciano, Romain Forey, Ismaël Padioleau, Magdalena Skrzypczak, Krzysztof Ginalski, Vincent Géli, Philippe Pasero,[...]. Mol Cell 2020
14
50

Human RecQ Helicases in DNA Double-Strand Break Repair.
Huiming Lu, Anthony J Davis. Front Cell Dev Biol 2021
1
100

WRN helicase is a synthetic lethal target in microsatellite unstable cancers.
Edmond M Chan, Tsukasa Shibue, James M McFarland, Benjamin Gaeta, Mahmoud Ghandi, Nancy Dumont, Alfredo Gonzalez, Justine S McPartlan, Tianxia Li, Yanxi Zhang,[...]. Nature 2019
90
50

Senataxin resolves RNA:DNA hybrids forming at DNA double-strand breaks to prevent translocations.
Sarah Cohen, Nadine Puget, Yea-Lih Lin, Thomas Clouaire, Marion Aguirrebengoa, Vincent Rocher, Philippe Pasero, Yvan Canitrot, Gaëlle Legube. Nat Commun 2018
114
50



R-loops as Janus-faced modulators of DNA repair.
Aline Marnef, Gaëlle Legube. Nat Cell Biol 2021
8
50

DDX11 loss causes replication stress and pharmacologically exploitable DNA repair defects.
Nanda Kumar Jegadesan, Dana Branzei. Proc Natl Acad Sci U S A 2021
1
100

Visualization of recombination-mediated damage bypass by template switching.
Michele Giannattasio, Katharina Zwicky, Cindy Follonier, Marco Foiani, Massimo Lopes, Dana Branzei. Nat Struct Mol Biol 2014
89
50

Noncanonical role of the 9-1-1 clamp in the error-free DNA damage tolerance pathway.
Georgios Ioannis Karras, Marco Fumasoni, Grzegorz Sienski, Fabio Vanoli, Dana Branzei, Stefan Jentsch. Mol Cell 2013
68
50


Error-free DNA damage tolerance pathway is facilitated by the Irc5 translocase through cohesin.
Ireneusz Litwin, Tomasz Bakowski, Barnabas Szakal, Ewa Pilarczyk, Ewa Maciaszczyk-Dziubinska, Dana Branzei, Robert Wysocki. EMBO J 2018
8
50

Repriming DNA synthesis: an intrinsic restart pathway that maintains efficient genome replication.
Lewis J Bainbridge, Rebecca Teague, Aidan J Doherty. Nucleic Acids Res 2021
1
100

DNA double-strand break repair-pathway choice in somatic mammalian cells.
Ralph Scully, Arvind Panday, Rajula Elango, Nicholas A Willis. Nat Rev Mol Cell Biol 2019
233
50

Processing of DNA Polymerase-Blocking Lesions during Genome Replication Is Spatially and Temporally Segregated from Replication Forks.
Ronald P Wong, Néstor García-Rodríguez, Nicola Zilio, Mária Hanulová, Helle D Ulrich. Mol Cell 2020
23
50

The helicase Pif1 functions in the template switching pathway of DNA damage bypass.
Néstor García-Rodríguez, Ronald P Wong, Helle D Ulrich. Nucleic Acids Res 2018
17
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.