A citation-based method for searching scientific literature

Paras Garg, Alejandro Martin-Trujillo, Oscar L Rodriguez, Scott J Gies, Elina Hadelia, Bharati Jadhav, Miten Jain, Benedict Paten, Andrew J Sharp. Am J Hum Genet 2021
Times Cited: 4







List of co-cited articles
10 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
75


A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
50

Structure, function, and genetics of lipoprotein (a).
Konrad Schmidt, Asma Noureen, Florian Kronenberg, Gerd Utermann. J Lipid Res 2016
168
50

Human-specific tandem repeat expansion and differential gene expression during primate evolution.
Arvis Sulovari, Ruiyang Li, Peter A Audano, David Porubsky, Mitchell R Vollger, Glennis A Logsdon, Wesley C Warren, Alex A Pollen, Mark J P Chaisson, Evan E Eichler. Proc Natl Acad Sci U S A 2019
31
50

Protein-coding repeat polymorphisms strongly shape diverse human phenotypes.
Ronen E Mukamel, Robert E Handsaker, Maxwell A Sherman, Alison R Barton, Yiming Zheng, Steven A McCarroll, Po-Ru Loh. bioRxiv 2021
5
50

Molecular mechanisms underlying nucleotide repeat expansion disorders.
Indranil Malik, Chase P Kelley, Eric T Wang, Peter K Todd. Nat Rev Mol Cell Biol 2021
13
50

Analysis of short tandem repeat expansions and their methylation state with nanopore sequencing.
Pay Giesselmann, Björn Brändl, Etienne Raimondeau, Rebecca Bowen, Christian Rohrandt, Rashmi Tandon, Helene Kretzmer, Günter Assum, Christina Galonska, Reiner Siebert,[...]. Nat Biotechnol 2019
47
50


The landscape of human STR variation.
Thomas Willems, Melissa Gymrek, Gareth Highnam, David Mittelman, Yaniv Erlich. Genome Res 2014
123
50


Apolipoprotein(a) gene accounts for greater than 90% of the variation in plasma lipoprotein(a) concentrations.
E Boerwinkle, C C Leffert, J Lin, C Lackner, G Chiesa, H H Hobbs. J Clin Invest 1992
790
25

Clinical Utility of Lipoprotein(a) and LPA Genetic Risk Score in Risk Prediction of Incident Atherosclerotic Cardiovascular Disease.
Mark Trinder, Md Mesbah Uddin, Phoebe Finneran, Krishna G Aragam, Pradeep Natarajan. JAMA Cardiol 2020
17
25

Exome sequencing and characterization of 49,960 individuals in the UK Biobank.
Cristopher V Van Hout, Ioanna Tachmazidou, Joshua D Backman, Joshua D Hoffman, Daren Liu, Ashutosh K Pandey, Claudia Gonzaga-Jauregui, Shareef Khalid, Bin Ye, Nilanjana Banerjee,[...]. Nature 2020
106
25

The mutational constraint spectrum quantified from variation in 141,456 humans.
Konrad J Karczewski, Laurent C Francioli, Grace Tiao, Beryl B Cummings, Jessica Alföldi, Qingbo Wang, Ryan L Collins, Kristen M Laricchia, Andrea Ganna, Daniel P Birnbaum,[...]. Nature 2020
25

Lipoprotein(a) Concentration and Risks of Cardiovascular Disease and Diabetes.
Daniel F Gudbjartsson, Gudmundur Thorgeirsson, Patrick Sulem, Anna Helgadottir, Arnaldur Gylfason, Jona Saemundsdottir, Eythor Bjornsson, Gudmundur L Norddahl, Aslaug Jonasdottir, Adalbjorg Jonasdottir,[...]. J Am Coll Cardiol 2019
52
25

A genome-wide association meta-analysis on lipoprotein (a) concentrations adjusted for apolipoprotein (a) isoforms.
Salome Mack, Stefan Coassin, Rico Rueedi, Noha A Yousri, Ilkka Seppälä, Christian Gieger, Sebastian Schönherr, Lukas Forer, Gertraud Erhart, Pedro Marques-Vidal,[...]. J Lipid Res 2017
67
25


Reference-based phasing using the Haplotype Reference Consortium panel.
Po-Ru Loh, Petr Danecek, Pier Francesco Palamara, Christian Fuchsberger, Yakir A Reshef, Hilary K Finucane, Sebastian Schoenherr, Lukas Forer, Shane McCarthy, Goncalo R Abecasis,[...]. Nat Genet 2016
564
25



Efficient Estimation and Applications of Cross-Validated Genetic Predictions to Polygenic Risk Scores and Linear Mixed Models.
Joel Mefford, Danny Park, Zhili Zheng, Arthur Ko, Mika Ala-Korpela, Markku Laakso, Päivi Pajukanta, Jian Yang, John Witte, Noah Zaitlen. J Comput Biol 2020
7
25

FINEMAP: efficient variable selection using summary data from genome-wide association studies.
Christian Benner, Chris C A Spencer, Aki S Havulinna, Veikko Salomaa, Samuli Ripatti, Matti Pirinen. Bioinformatics 2016
224
25

Protein-coding repeat polymorphisms strongly shape diverse human phenotypes.
Ronen E Mukamel, Robert E Handsaker, Maxwell A Sherman, Alison R Barton, Yiming Zheng, Steven A McCarroll, Po-Ru Loh. Science 2021
7
25

An integrated map of genetic variation from 1,092 human genomes.
Goncalo R Abecasis, Adam Auton, Lisa D Brooks, Mark A DePristo, Richard M Durbin, Robert E Handsaker, Hyun Min Kang, Gabor T Marth, Gil A McVean. Nature 2012
25

Second-generation PLINK: rising to the challenge of larger and richer datasets.
Christopher C Chang, Carson C Chow, Laurent Cam Tellier, Shashaank Vattikuti, Shaun M Purcell, James J Lee. Gigascience 2015
25

Altered expression and allelic association of the hypervariable membrane mucin MUC1 in Helicobacter pylori gastritis.
Lynne E Vinall, Marie King, Marco Novelli, Carole A Green, Geoff Daniels, John Hilkens, Martin Sarner, Dallas M Swallow. Gastroenterology 2002
90
25

Genotype Imputation with Millions of Reference Samples.
Brian L Browning, Sharon R Browning. Am J Hum Genet 2016
474
25


The human genome browser at UCSC.
W James Kent, Charles W Sugnet, Terrence S Furey, Krishna M Roskin, Tom H Pringle, Alan M Zahler, David Haussler. Genome Res 2002
25

Targeted genotyping of variable number tandem repeats with adVNTR.
Mehrdad Bakhtiari, Sharona Shleizer-Burko, Melissa Gymrek, Vikas Bansal, Vineet Bafna. Genome Res 2018
20
25


Mixed-model association for biobank-scale datasets.
Po-Ru Loh, Gleb Kichaev, Steven Gazal, Armin P Schoech, Alkes L Price. Nat Genet 2018
210
25

A common nonsense mutation in the repetitive Kringle IV-2 domain of human apolipoprotein(a) results in a truncated protein and low plasma Lp(a).
Walther Parson, Hans Georg Kraft, Harald Niederstätter, Arnulf W Lingenhel, Silvano Köchl, Friedrich Fresser, Gerd Utermann. Hum Mutat 2004
29
25

Genome-Wide Association Study and Identification of a Protective Missense Variant on Lipoprotein(a) Concentration: Protective Missense Variant on Lipoprotein(a) Concentration-Brief Report.
M Abdullah Said, Ming Wai Yeung, Yordi J van de Vegte, Jan Walter Benjamins, Robin P F Dullaart, Sanni Ruotsalainen, Samuli Ripatti, Pradeep Natarajan, Luis Eduardo Juarez-Orozco, Niek Verweij,[...]. Arterioscler Thromb Vasc Biol 2021
7
25

Dodecamer repeat expansion in cystatin B gene in progressive myoclonus epilepsy.
M D Lalioti, H S Scott, C Buresi, C Rossier, A Bottani, M A Morris, A Malafosse, S E Antonarakis. Nature 1997
243
25


Haplotype-resolved diverse human genomes and integrated analysis of structural variation.
Peter Ebert, Peter A Audano, Qihui Zhu, Bernardo Rodriguez-Martin, David Porubsky, Marc Jan Bonder, Arvis Sulovari, Jana Ebler, Weichen Zhou, Rebecca Serra Mari,[...]. Science 2021
81
25

Prospects of Fine-Mapping Trait-Associated Genomic Regions by Using Summary Statistics from Genome-wide Association Studies.
Christian Benner, Aki S Havulinna, Marjo-Riitta Järvelin, Veikko Salomaa, Samuli Ripatti, Matti Pirinen. Am J Hum Genet 2017
74
25

Mutations in Three Genes Encoding Proteins Involved in Hair Shaft Formation Cause Uncombable Hair Syndrome.
F Buket Ü Basmanav, Laura Cau, Aylar Tafazzoli, Marie-Claire Méchin, Sabrina Wolf, Maria Teresa Romano, Frederic Valentin, Henning Wiegmann, Anne Huchenq, Rima Kandil,[...]. Am J Hum Genet 2016
56
25

A novel but frequent variant in LPA KIV-2 is associated with a pronounced Lp(a) and cardiovascular risk reduction.
Stefan Coassin, Gertraud Erhart, Hansi Weissensteiner, Mariana Eca Guimarães de Araújo, Claudia Lamina, Sebastian Schönherr, Lukas Forer, Margot Haun, Jamie Lee Losso, Anna Köttgen,[...]. Eur Heart J 2017
33
25

Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations.
Yukinori Okada, Xueling Sim, Min Jin Go, Jer-Yuarn Wu, Dongfeng Gu, Fumihiko Takeuchi, Atsushi Takahashi, Shiro Maeda, Tatsuhiko Tsunoda, Peng Chen,[...]. Nat Genet 2012
195
25

Investigation of a nonsense mutation located in the complex KIV-2 copy number variation region of apolipoprotein(a) in 10,910 individuals.
Silvia Di Maio, Rebecca Grüneis, Gertraud Streiter, Claudia Lamina, Manuel Maglione, Sebastian Schoenherr, Dietmar Öfner, Barbara Thorand, Annette Peters, Kai-Uwe Eckardt,[...]. Genome Med 2020
7
25

A comprehensive map of single-base polymorphisms in the hypervariable LPA kringle IV type 2 copy number variation region.
Stefan Coassin, Sebastian Schönherr, Hansi Weissensteiner, Gertraud Erhart, Lukas Forer, Jamie Lee Losso, Claudia Lamina, Margot Haun, Gerd Utermann, Bernhard Paulweber,[...]. J Lipid Res 2019
21
25

Optimization by simulated annealing.
S Kirkpatrick, C D Gelatt, M P Vecchi. Science 1983
25

Improved linear mixed models for genome-wide association studies.
Jennifer Listgarten, Christoph Lippert, Carl M Kadie, Robert I Davidson, Eleazar Eskin, David Heckerman. Nat Methods 2012
176
25

A new multipoint method for genome-wide association studies by imputation of genotypes.
Jonathan Marchini, Bryan Howie, Simon Myers, Gil McVean, Peter Donnelly. Nat Genet 2007
25

Lp(a) glycoprotein phenotypes. Inheritance and relation to Lp(a)-lipoprotein concentrations in plasma.
G Utermann, H J Menzel, H G Kraft, H C Duba, H G Kemmler, C Seitz. J Clin Invest 1987
798
25

CADD: predicting the deleteriousness of variants throughout the human genome.
Philipp Rentzsch, Daniela Witten, Gregory M Cooper, Jay Shendure, Martin Kircher. Nucleic Acids Res 2019
25

Genetic analysis of FAM46A in Spanish families with autosomal recessive retinitis pigmentosa: characterisation of novel VNTRs.
I Barragán, S Borrego, M M Abd El-Aziz, M F El-Ashry, L Abu-Safieh, S S Bhattacharya, G Antiñolo. Ann Hum Genet 2008
26
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.