A citation-based method for searching scientific literature

Elizabeth M Steinert, Karthik Vasan, Navdeep S Chandel. Annu Rev Immunol 2021
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos.
Xiaoyu Liu, Chenfei Wang, Wenqiang Liu, Jingyi Li, Chong Li, Xiaochen Kou, Jiayu Chen, Yanhong Zhao, Haibo Gao, Hong Wang,[...]. Nature 2016
278
100

L-2-Hydroxyglutarate production arises from noncanonical enzyme function at acidic pH.
Andrew M Intlekofer, Bo Wang, Hui Liu, Hardik Shah, Carlos Carmona-Fontaine, Ariën S Rustenburg, Salah Salah, M R Gunner, John D Chodera, Justin R Cross,[...]. Nat Chem Biol 2017
115
100



IVF culture media: past, present and future.
Elpiniki Chronopoulou, Joyce C Harper. Hum Reprod Update 2015
74
100

LIN28 Regulates Stem Cell Metabolism and Conversion to Primed Pluripotency.
Jin Zhang, Sutheera Ratanasirintrawoot, Sriram Chandrasekaran, Zhaoting Wu, Scott B Ficarro, Chunxiao Yu, Christian A Ross, Davide Cacchiarelli, Qing Xia, Marc Seligson,[...]. Cell Stem Cell 2016
157
100

Oxygen consumption and energy metabolism of the early mouse embryo.
F D Houghton, J G Thompson, C J Kennedy, H J Leese. Mol Reprod Dev 1996
198
100

Trimmomatic: a flexible trimmer for Illumina sequence data.
Anthony M Bolger, Marc Lohse, Bjoern Usadel. Bioinformatics 2014
100

Regulation of redox metabolism in the mouse oocyte and embryo.
Rémi Dumollard, Zoe Ward, John Carroll, Michael R Duchen. Development 2007
147
100

Dynamic Network Modeling of Stem Cell Metabolism.
Fangzhou Shen, Camden Cheek, Sriram Chandrasekaran. Methods Mol Biol 2019
7
100



The transcriptional and signalling networks of pluripotency.
Huck-Hui Ng, M Azim Surani. Nat Cell Biol 2011
225
100

Metabolism, Activity, and Targeting of D- and L-2-Hydroxyglutarates.
Dan Ye, Kun-Liang Guan, Yue Xiong. Trends Cancer 2018
81
100

Dynamics of the epigenetic landscape during the maternal-to-zygotic transition.
Melanie A Eckersley-Maslin, Celia Alda-Catalinas, Wolf Reik. Nat Rev Mol Cell Biol 2018
111
100

Hypoxia induces heart regeneration in adult mice.
Yuji Nakada, Diana C Canseco, SuWannee Thet, Salim Abdisalaam, Aroumougame Asaithamby, Celio X Santos, Ajay M Shah, Hua Zhang, James E Faber, Michael T Kinter,[...]. Nature 2017
308
100

Naive and primed pluripotent states.
Jennifer Nichols, Austin Smith. Cell Stem Cell 2009
100

Metabolism in Pluripotent Stem Cells and Early Mammalian Development.
Jin Zhang, Jing Zhao, Perrine Dahan, Vivian Lu, Cheng Zhang, Hu Li, Michael A Teitell. Cell Metab 2018
45
100

Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells.
Qiaolin Deng, Daniel Ramsköld, Björn Reinius, Rickard Sandberg. Science 2014
591
100


CPS1 maintains pyrimidine pools and DNA synthesis in KRAS/LKB1-mutant lung cancer cells.
Jiyeon Kim, Zeping Hu, Ling Cai, Kailong Li, Eunhee Choi, Brandon Faubert, Divya Bezwada, Jaime Rodriguez-Canales, Pamela Villalobos, Yu-Fen Lin,[...]. Nature 2017
113
100

MouseNet v2: a database of gene networks for studying the laboratory mouse and eight other model vertebrates.
Eiru Kim, Sohyun Hwang, Hyojin Kim, Hongseok Shim, Byunghee Kang, Sunmo Yang, Jae Ho Shim, Seung Yeon Shin, Edward M Marcotte, Insuk Lee. Nucleic Acids Res 2016
24
100

HIF1α induced switch from bivalent to exclusively glycolytic metabolism during ESC-to-EpiSC/hESC transition.
Wenyu Zhou, Michael Choi, Daciana Margineantu, Lilyana Margaretha, Jennifer Hesson, Christopher Cavanaugh, C Anthony Blau, Marshall S Horwitz, David Hockenbery, Carol Ware,[...]. EMBO J 2012
329
100

Integration of external signaling pathways with the core transcriptional network in embryonic stem cells.
Xi Chen, Han Xu, Ping Yuan, Fang Fang, Mikael Huss, Vinsensius B Vega, Eleanor Wong, Yuriy L Orlov, Weiwei Zhang, Jianming Jiang,[...]. Cell 2008
100

Effects of pyruvate and glucose on the development of human preimplantation embryos in vitro.
J Conaghan, A H Handyside, R M Winston, H J Leese. J Reprod Fertil 1993
184
100

Mechanical regulation of glycolysis via cytoskeleton architecture.
Jin Suk Park, Christoph J Burckhardt, Rossana Lazcano, Luisa M Solis, Tadamoto Isogai, Linqing Li, Christopher S Chen, Boning Gao, John D Minna, Robert Bachoo,[...]. Nature 2020
83
100

Genetic programs in human and mouse early embryos revealed by single-cell RNA sequencing.
Zhigang Xue, Kevin Huang, Chaochao Cai, Lingbo Cai, Chun-yan Jiang, Yun Feng, Zhenshan Liu, Qiao Zeng, Liming Cheng, Yi E Sun,[...]. Nature 2013
528
100

NRF2 regulates serine biosynthesis in non-small cell lung cancer.
Gina M DeNicola, Pei-Hsuan Chen, Edouard Mullarky, Jessica A Sudderth, Zeping Hu, David Wu, Hao Tang, Yang Xie, John M Asara, Kenneth E Huffman,[...]. Nat Genet 2015
365
100


The landscape of accessible chromatin in mammalian preimplantation embryos.
Jingyi Wu, Bo Huang, He Chen, Qiangzong Yin, Yang Liu, Yunlong Xiang, Bingjie Zhang, Bofeng Liu, Qiujun Wang, Weikun Xia,[...]. Nature 2016
272
100

Stat3 promotes mitochondrial transcription and oxidative respiration during maintenance and induction of naive pluripotency.
Elena Carbognin, Riccardo M Betto, Maria E Soriano, Austin G Smith, Graziano Martello. EMBO J 2016
91
100

L-2-Hydroxyglutarate: an epigenetic modifier and putative oncometabolite in renal cancer.
Eun-Hee Shim, Carolina B Livi, Dinesh Rakheja, Jubilee Tan, Daniel Benson, Vishwas Parekh, Eun-Young Kho, Arindam P Ghosh, Richard Kirkman, Sadanan Velu,[...]. Cancer Discov 2014
156
100

Oncometabolite 2-hydroxyglutarate is a competitive inhibitor of α-ketoglutarate-dependent dioxygenases.
Wei Xu, Hui Yang, Ying Liu, Ying Yang, Ping Wang, Se-Hee Kim, Shinsuke Ito, Chen Yang, Pu Wang, Meng-Tao Xiao,[...]. Cancer Cell 2011
100

Embryonic stem cell potency fluctuates with endogenous retrovirus activity.
Todd S Macfarlan, Wesley D Gifford, Shawn Driscoll, Karen Lettieri, Helen M Rowe, Dario Bonanomi, Amy Firth, Oded Singer, Didier Trono, Samuel L Pfaff. Nature 2012
535
100

Pluripotent stem cell energy metabolism: an update.
Tara Teslaa, Michael A Teitell. EMBO J 2015
127
100

Regulation of mitochondrial biogenesis in erythropoiesis by mTORC1-mediated protein translation.
Xin Liu, Yuannyu Zhang, Min Ni, Hui Cao, Robert A J Signer, Dan Li, Mushan Li, Zhimin Gu, Zeping Hu, Kathryn E Dickerson,[...]. Nat Cell Biol 2017
77
100

NetMiner-an ensemble pipeline for building genome-wide and high-quality gene co-expression network using massive-scale RNA-seq samples.
Hua Yu, Bingke Jiao, Lu Lu, Pengfei Wang, Shuangcheng Chen, Chengzhi Liang, Wei Liu. PLoS One 2018
11
100

Comprehensive Mapping of Pluripotent Stem Cell Metabolism Using Dynamic Genome-Scale Network Modeling.
Sriram Chandrasekaran, Jin Zhang, Zhen Sun, Li Zhang, Christian A Ross, Yu-Chung Huang, John M Asara, Hu Li, George Q Daley, James J Collins. Cell Rep 2017
31
100



Mutant IDH1 regulates the tumor-associated immune system in gliomas.
Nduka M Amankulor, Youngmi Kim, Sonali Arora, Julia Kargl, Frank Szulzewsky, Mark Hanke, Daciana H Margineantu, Aparna Rao, Hamid Bolouri, Jeff Delrow,[...]. Genes Dev 2017
173
100

Hypoxia-Mediated Increases in L-2-hydroxyglutarate Coordinate the Metabolic Response to Reductive Stress.
William M Oldham, Clary B Clish, Yi Yang, Joseph Loscalzo. Cell Metab 2015
175
100

Nuclear Localization of Mitochondrial TCA Cycle Enzymes as a Critical Step in Mammalian Zygotic Genome Activation.
Raghavendra Nagaraj, Mark S Sharpley, Fangtao Chi, Daniel Braas, Yonggang Zhou, Rachel Kim, Amander T Clark, Utpal Banerjee. Cell 2017
94
100

Establishing Chromatin Regulatory Landscape during Mouse Preimplantation Development.
Falong Lu, Yuting Liu, Azusa Inoue, Tsukasa Suzuki, Keji Zhao, Yi Zhang. Cell 2016
136
100

An Essential Role of the Mitochondrial Electron Transport Chain in Cell Proliferation Is to Enable Aspartate Synthesis.
Kıvanç Birsoy, Tim Wang, Walter W Chen, Elizaveta Freinkman, Monther Abu-Remaileh, David M Sabatini. Cell 2015
557
100

Cancer-associated metabolite 2-hydroxyglutarate accumulates in acute myelogenous leukemia with isocitrate dehydrogenase 1 and 2 mutations.
Stefan Gross, Rob A Cairns, Mark D Minden, Edward M Driggers, Mark A Bittinger, Hyun Gyung Jang, Masato Sasaki, Shengfang Jin, David P Schenkein, Shinsan M Su,[...]. J Exp Med 2010
506
100

Heterochromatin establishment during early mammalian development is regulated by pericentromeric RNA and characterized by non-repressive H3K9me3.
Adam Burton, Vincent Brochard, Carmen Galan, Elias R Ruiz-Morales, Quirze Rovira, Diego Rodriguez-Terrones, Kai Kruse, Stéphanie Le Gras, Vishnu S Udayakumar, Hang Gyeong Chin,[...]. Nat Cell Biol 2020
20
100

S-2-hydroxyglutarate regulates CD8+ T-lymphocyte fate.
Petros A Tyrakis, Asis Palazon, David Macias, Kian L Lee, Anthony T Phan, Pedro Veliça, Jia You, Grace S Chia, Jingwei Sim, Andrew Doedens,[...]. Nature 2016
185
100

Inosine Monophosphate Dehydrogenase Dependence in a Subset of Small Cell Lung Cancers.
Fang Huang, Min Ni, Milind D Chalishazar, Kenneth E Huffman, Jiyeon Kim, Ling Cai, Xiaolei Shi, Feng Cai, Lauren G Zacharias, Abbie S Ireland,[...]. Cell Metab 2018
65
100

Oxidative stress inhibits distant metastasis by human melanoma cells.
Elena Piskounova, Michalis Agathocleous, Malea M Murphy, Zeping Hu, Sara E Huddlestun, Zhiyu Zhao, A Marilyn Leitch, Timothy M Johnson, Ralph J DeBerardinis, Sean J Morrison. Nature 2015
562
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.