A citation-based method for searching scientific literature

Ewa Bączyńska, Katarzyna Karolina Pels, Subhadip Basu, Jakub Włodarczyk, Błażej Ruszczycki. Int J Mol Sci 2021
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity





Automated 3-D Detection of Dendritic Spines from In Vivo Two-Photon Image Stacks.
P K Singh, P Hernandez-Herrera, D Labate, M Papadakis. Neuroinformatics 2017
2
50


Rayburst sampling, an algorithm for automated three-dimensional shape analysis from laser scanning microscopy images.
Alfredo Rodriguez, Douglas B Ehlenberger, Patrick R Hof, Susan L Wearne. Nat Protoc 2006
133
50

Laminar and compartmental regulation of dendritic growth in mature cortex.
David K Chow, Matthias Groszer, Mochtar Pribadi, Michal Machniki, S Thomas Carmichael, Xin Liu, Joshua T Trachtenberg. Nat Neurosci 2009
91
50

Simultaneous Two-photon in Vivo Imaging of Synaptic Inputs and Postsynaptic Targets in the Mouse Retrosplenial Cortex.
Kacper Łukasiewicz, Magdalena Robacha, Łukasz Bożycki, Kasia Radwanska, Rafał Czajkowski. J Vis Exp 2016
3
50

Effective automated pipeline for 3D reconstruction of synapses based on deep learning.
Chi Xiao, Weifu Li, Hao Deng, Xi Chen, Yang Yang, Qiwei Xie, Hua Han. BMC Bioinformatics 2018
4
50

Sampling issues in quantitative analysis of dendritic spines morphology.
Błażej Ruszczycki, Zsuzsanna Szepesi, Grzegorz M Wilczynski, Monika Bijata, Katarzyna Kalita, Leszek Kaczmarek, Jakub Wlodarczyk. BMC Bioinformatics 2012
42
50

Labeling of dendritic spines with the carbocyanine dye DiI for confocal microscopic imaging in lightly fixed cortical slices.
Byung G Kim, Hai-Ning Dai, Marietta McAtee, Stefano Vicini, Barbara S Bregman. J Neurosci Methods 2007
50
50


Matrix metalloproteinases regulate the formation of dendritic spine head protrusions during chemically induced long-term potentiation.
Zsuzsanna Szepesi, Monika Bijata, Blazej Ruszczycki, Leszek Kaczmarek, Jakub Wlodarczyk. PLoS One 2013
45
50

Dendritic structural plasticity and neuropsychiatric disease.
Marc P Forrest, Euan Parnell, Peter Penzes. Nat Rev Neurosci 2018
165
50

Spine Dynamics: Are They All the Same?
Kalen P Berry, Elly Nedivi. Neuron 2017
181
50

Quantitative 3-D morphometric analysis of individual dendritic spines.
Subhadip Basu, Punam Kumar Saha, Matylda Roszkowska, Marta Magnowska, Ewa Baczynska, Nirmal Das, Dariusz Plewczynski, Jakub Wlodarczyk. Sci Rep 2018
14
50

Transient ECM protease activity promotes synaptic plasticity.
Marta Magnowska, Tomasz Gorkiewicz, Anna Suska, Marcin Wawrzyniak, Izabela Rutkowska-Wlodarczyk, Leszek Kaczmarek, Jakub Wlodarczyk. Sci Rep 2016
20
50

Automated dendritic spine detection using convolutional neural networks on maximum intensity projected microscopic volumes.
Xuerong Xiao, Maja Djurisic, Assaf Hoogi, Richard W Sapp, Carla J Shatz, Daniel L Rubin. J Neurosci Methods 2018
4
50

Structural basis of long-term potentiation in single dendritic spines.
Masanori Matsuzaki, Naoki Honkura, Graham C R Ellis-Davies, Haruo Kasai. Nature 2004
50

Structural plasticity upon learning: regulation and functions.
Pico Caroni, Flavio Donato, Dominique Muller. Nat Rev Neurosci 2012
269
50

User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability.
Paul A Yushkevich, Joseph Piven, Heather Cody Hazlett, Rachel Gimpel Smith, Sean Ho, James C Gee, Guido Gerig. Neuroimage 2006
50

Glutamate induces the rapid formation of spine head protrusions in hippocampal slice cultures.
David A Richards, José Maria Mateos, Sylvain Hugel, Vincenzo de Paola, Pico Caroni, Beat H Gähwiler, R Anne McKinney. Proc Natl Acad Sci U S A 2005
110
50

Dendritic spines: structure, dynamics and regulation.
H Hering, M Sheng. Nat Rev Neurosci 2001
624
50

Examining form and function of dendritic spines.
Kevin F H Lee, Cary Soares, Jean-Claude Béïque. Neural Plast 2012
52
50

Computational geometry analysis of dendritic spines by structured illumination microscopy.
Yutaro Kashiwagi, Takahito Higashi, Kazuki Obashi, Yuka Sato, Noboru H Komiyama, Seth G N Grant, Shigeo Okabe. Nat Commun 2019
16
50

Prophylactic Ketamine Treatment Promotes Resilience to Chronic Stress and Accelerates Recovery: Correlation with Changes in Synaptic Plasticity in the CA3 Subregion of the Hippocampus.
Adam Krzystyniak, Ewa Baczynska, Marta Magnowska, Svitlana Antoniuk, Matylda Roszkowska, Monika Zareba-Koziol, Nirmal Das, Subhadip Basu, Michal Pikula, Jakub Wlodarczyk. Int J Mol Sci 2019
12
50

Dendritic spine pathology in schizophrenia.
J R Glausier, D A Lewis. Neuroscience 2013
304
50


Automated three-dimensional detection and shape classification of dendritic spines from fluorescence microscopy images.
Alfredo Rodriguez, Douglas B Ehlenberger, Dara L Dickstein, Patrick R Hof, Susan L Wearne. PLoS One 2008
362
50

Integration of multiscale dendritic spine structure and function data into systems biology models.
James J Mancuso, Jie Cheng, Zheng Yin, Jared C Gilliam, Xiaofeng Xia, Xuping Li, Stephen T C Wong. Front Neuroanat 2014
8
50

Dendritic spine abnormalities in amyloid precursor protein transgenic mice demonstrated by gene transfer and intravital multiphoton microscopy.
Tara L Spires, Melanie Meyer-Luehmann, Edward A Stern, Pamela J McLean, Jesse Skoch, Paul T Nguyen, Brian J Bacskai, Bradley T Hyman. J Neurosci 2005
411
50

Long-term in vivo imaging of experience-dependent synaptic plasticity in adult cortex.
Joshua T Trachtenberg, Brian E Chen, Graham W Knott, Guoping Feng, Joshua R Sanes, Egbert Welker, Karel Svoboda. Nature 2002
50

Dendritic spine pathology: cause or consequence of neurological disorders?
John C Fiala, Josef Spacek, Kristen M Harris. Brain Res Brain Res Rev 2002
579
50

Multiscale Opening of Conjoined Fuzzy Objects: Theory and Applications.
Punam K Saha, Subhadip Basu, Eric A Hoffman. IEEE Trans Fuzzy Syst 2016
4
50

Dendritic spines: Revisiting the physiological role.
Saravana Babu Chidambaram, A G Rathipriya, Srinivasa Rao Bolla, Abid Bhat, Bipul Ray, Arehally Marappa Mahalakshmi, Thamilarasan Manivasagam, Arokiasamy Justin Thenmozhi, Musthafa Mohamed Essa, Gilles J Guillemin,[...]. Prog Neuropsychopharmacol Biol Psychiatry 2019
61
50

Imaging neocortical neurons through a chronic cranial window.
Anthony Holtmaat, Vincenzo de Paola, Linda Wilbrecht, Josh T Trachtenberg, Karel Svoboda, Carlos Portera-Cailliau. Cold Spring Harb Protoc 2012
29
50

Robust and automated detection of subcellular morphological motifs in 3D microscopy images.
Meghan K Driscoll, Erik S Welf, Andrew R Jamieson, Kevin M Dean, Tadamoto Isogai, Reto Fiolka, Gaudenz Danuser. Nat Methods 2019
21
50

Cytoskeletal makeup of the synapse: Shaft versus spine.
Michael Bucher, Tomas Fanutza, Marina Mikhaylova. Cytoskeleton (Hoboken) 2020
11
50

Intracellular and trans-synaptic regulation of glutamatergic synaptogenesis by EphB receptors.
Matthew S Kayser, Andrew C McClelland, Ethan G Hughes, Matthew B Dalva. J Neurosci 2006
159
50

Dysferlin interacts with annexins A1 and A2 and mediates sarcolemmal wound-healing.
Niall J Lennon, Alvin Kho, Brian J Bacskai, Sarah L Perlmutter, Bradley T Hyman, Robert H Brown. J Biol Chem 2003
290
50

Ephrin regulation of synapse formation, function and plasticity.
Martin Hruska, Matthew B Dalva. Mol Cell Neurosci 2012
93
50

The AP-1 transcription factor c-Jun is required for efficient axonal regeneration.
Gennadij Raivich, Marion Bohatschek, Clive Da Costa, Osuke Iwata, Matthias Galiano, Maria Hristova, Abdolrahman S Nateri, Milan Makwana, Lluís Riera-Sans, David P Wolfer,[...]. Neuron 2004
328
50


Positive surface charge of GluN1 N-terminus mediates the direct interaction with EphB2 and NMDAR mobility.
Halley R Washburn, Nan L Xia, Wei Zhou, Yu-Ting Mao, Matthew B Dalva. Nat Commun 2020
9
50

Kinase-independent requirement of EphB2 receptors in hippocampal synaptic plasticity.
I C Grunwald, M Korte, D Wolfer, G A Wilkinson, K Unsicker, H P Lipp, T Bonhoeffer, R Klein. Neuron 2001
233
50



The receptor tyrosine kinase EphB2 regulates NMDA-dependent synaptic function.
J T Henderson, J Georgiou, Z Jia, J Robertson, S Elowe, J C Roder, T Pawson. Neuron 2001
240
50

Cytokines and cytokine networks target neurons to modulate long-term potentiation.
G Aleph Prieto, Carl W Cotman. Cytokine Growth Factor Rev 2017
45
50



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.