A citation-based method for searching scientific literature


List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Regulation of coactivator complex assembly and function by protein arginine methylation and demethylimination.
Young-Ho Lee, Scott A Coonrod, W Lee Kraus, Mary Anne Jelinek, Michael R Stallcup. Proc Natl Acad Sci U S A 2005
165
100

Transcription factor AP1 potentiates chromatin accessibility and glucocorticoid receptor binding.
Simon C Biddie, Sam John, Pete J Sabo, Robert E Thurman, Thomas A Johnson, R Louis Schiltz, Tina B Miranda, Myong-Hee Sung, Saskia Trump, Stafford L Lightman,[...]. Mol Cell 2011
290
100

AS03-adjuvanted H5N1 vaccine promotes antibody diversity and affinity maturation, NAI titers, cross-clade H5N1 neutralization, but not H1N1 cross-subtype neutralization.
Surender Khurana, Elizabeth M Coyle, Jody Manischewitz, Lisa R King, Jin Gao, Ronald N Germain, Pamela L Schwartzberg, John S Tsang, Hana Golding. NPJ Vaccines 2018
27
100

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
100

Discovery of a selective catalytic p300/CBP inhibitor that targets lineage-specific tumours.
Loren M Lasko, Clarissa G Jakob, Rohinton P Edalji, Wei Qiu, Debra Montgomery, Enrico L Digiammarino, T Matt Hansen, Roberto M Risi, Robin Frey, Vlasios Manaves,[...]. Nature 2017
227
100

YAP Aggravates Inflammatory Bowel Disease by Regulating M1/M2 Macrophage Polarization and Gut Microbial Homeostasis.
Xin Zhou, Weiyun Li, Shuang Wang, Panli Zhang, Qiong Wang, Jun Xiao, Chi Zhang, Xin Zheng, Xiaoyan Xu, Shengjie Xue,[...]. Cell Rep 2019
48
100

Moz and retinoic acid coordinately regulate H3K9 acetylation, Hox gene expression, and segment identity.
Anne K Voss, Caitlin Collin, Mathew P Dixon, Tim Thomas. Dev Cell 2009
90
100

CD14+CD16+ monocytes are the main target of Zika virus infection in peripheral blood mononuclear cells in a paediatric study in Nicaragua.
Daniela Michlmayr, Paulina Andrade, Karla Gonzalez, Angel Balmaseda, Eva Harris. Nat Microbiol 2017
92
100

AP-1 Contributes to Chromatin Accessibility to Promote Sarcomere Disassembly and Cardiomyocyte Protrusion During Zebrafish Heart Regeneration.
Arica Beisaw, Carsten Kuenne, Stefan Guenther, Julia Dallmann, Chi-Chung Wu, Mette Bentsen, Mario Looso, Didier Y R Stainier. Circ Res 2020
19
100

Systems vaccinology: Enabling rational vaccine design with systems biological approaches.
Thomas Hagan, Helder I Nakaya, Shankar Subramaniam, Bali Pulendran. Vaccine 2015
64
100

The molecular hallmarks of epigenetic control.
C David Allis, Thomas Jenuwein. Nat Rev Genet 2016
878
100

Regulation of Inflammation- and Infection-Driven Hematopoiesis.
Steffen Boettcher, Markus G Manz. Trends Immunol 2017
94
100

Adjuvanting a subunit COVID-19 vaccine to induce protective immunity.
Prabhu S Arunachalam, Alexandra C Walls, Nadia Golden, Caroline Atyeo, Stephanie Fischinger, Chunfeng Li, Pyone Aye, Mary Jane Navarro, Lilin Lai, Venkata Viswanadh Edara,[...]. Nature 2021
11
100

The AP-1 Transcription Factor c-Jun Promotes Arthritis by Regulating Cyclooxygenase-2 and Arginase-1 Expression in Macrophages.
Nicole Hannemann, Jutta Jordan, Sushmita Paul, Stephen Reid, Hanns-Wolf Baenkler, Sophia Sonnewald, Tobias Bäuerle, Julio Vera, Georg Schett, Aline Bozec. J Immunol 2017
25
100


A lipopolysaccharide-specific enhancer complex involving Ets, Elk-1, Sp1, and CREB binding protein and p300 is recruited to the tumor necrosis factor alpha promoter in vivo.
E Y Tsai, J V Falvo, A V Tsytsykova, A K Barczak, A M Reimold, L H Glimcher, M J Fenton, D C Gordon, I F Dunn, A E Goldfeld. Mol Cell Biol 2000
215
100

Global analyses of human immune variation reveal baseline predictors of postvaccination responses.
John S Tsang, Pamela L Schwartzberg, Yuri Kotliarov, Angelique Biancotto, Zhi Xie, Ronald N Germain, Ena Wang, Matthew J Olnes, Manikandan Narayanan, Hana Golding,[...]. Cell 2014
236
100

Modulation of Myelopoiesis Progenitors Is an Integral Component of Trained Immunity.
Ioannis Mitroulis, Klara Ruppova, Baomei Wang, Lan-Sun Chen, Michal Grzybek, Tatyana Grinenko, Anne Eugster, Maria Troullinaki, Alessandra Palladini, Ioannis Kourtzelis,[...]. Cell 2018
324
100


The IRF family transcription factors in immunity and oncogenesis.
Tomohiko Tamura, Hideyuki Yanai, David Savitsky, Tadatsugu Taniguchi. Annu Rev Immunol 2008
781
100

Systems vaccinology.
Bali Pulendran, Shuzhao Li, Helder I Nakaya. Immunity 2010
234
100

Control of proinflammatory gene programs by regulated trimethylation and demethylation of histone H4K20.
Joshua D Stender, Gabriel Pascual, Wen Liu, Minna U Kaikkonen, Kevin Do, Nathanael J Spann, Michael Boutros, Norbert Perrimon, Michael G Rosenfeld, Christopher K Glass. Mol Cell 2012
121
100

Single-cell analysis reveals that stochasticity and paracrine signaling control interferon-alpha production by plasmacytoid dendritic cells.
Florian Wimmers, Nikita Subedi, Nicole van Buuringen, Daan Heister, Judith Vivié, Inge Beeren-Reinieren, Rob Woestenenk, Harry Dolstra, Aigars Piruska, Joannes F M Jacobs,[...]. Nat Commun 2018
47
100

MST1 promotes apoptosis through phosphorylation of histone H2AX.
Weihong Wen, Feng Zhu, Jishuai Zhang, Young-Sam Keum, Tatyana Zykova, Ke Yao, Cong Peng, Duo Zheng, Yong-Yeon Cho, Wei-ya Ma,[...]. J Biol Chem 2010
49
100


Integrated single-cell analysis of multicellular immune dynamics during hyperacute HIV-1 infection.
Samuel W Kazer, Toby P Aicher, Daniel M Muema, Shaina L Carroll, Jose Ordovas-Montanes, Vincent N Miao, Ang A Tu, Carly G K Ziegler, Sarah K Nyquist, Emily B Wong,[...]. Nat Med 2020
16
100

Defining trained immunity and its role in health and disease.
Mihai G Netea, Jorge Domínguez-Andrés, Luis B Barreiro, Triantafyllos Chavakis, Maziar Divangahi, Elaine Fuchs, Leo A B Joosten, Jos W M van der Meer, Musa M Mhlanga, Willem J M Mulder,[...]. Nat Rev Immunol 2020
282
100

Emerging concepts in the science of vaccine adjuvants.
Bali Pulendran, Prabhu S Arunachalam, Derek T O'Hagan. Nat Rev Drug Discov 2021
9
100

Integrated Single-Cell Analysis Maps the Continuous Regulatory Landscape of Human Hematopoietic Differentiation.
Jason D Buenrostro, M Ryan Corces, Caleb A Lareau, Beijing Wu, Alicia N Schep, Martin J Aryee, Ravindra Majeti, Howard Y Chang, William J Greenleaf. Cell 2018
176
100

JUNB is a key transcriptional modulator of macrophage activation.
Mary F Fontana, Alyssa Baccarella, Nidhi Pancholi, Miles A Pufall, De'Broski R Herbert, Charles C Kim. J Immunol 2015
36
100

Single-Cell Chromatin Modification Profiling Reveals Increased Epigenetic Variations with Aging.
Peggie Cheung, Francesco Vallania, Hayley C Warsinske, Michele Donato, Steven Schaffert, Sarah E Chang, Mai Dvorak, Cornelia L Dekker, Mark M Davis, Paul J Utz,[...]. Cell 2018
117
100

Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion.
Ansuman T Satpathy, Jeffrey M Granja, Kathryn E Yost, Yanyan Qi, Francesca Meschi, Geoffrey P McDermott, Brett N Olsen, Maxwell R Mumbach, Sarah E Pierce, M Ryan Corces,[...]. Nat Biotechnol 2019
124
100

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
100

Developmental and Functional Heterogeneity of Monocytes.
Martin Guilliams, Alexander Mildner, Simon Yona. Immunity 2018
193
100

Expression and activity of citrullinating peptidylarginine deiminase enzymes in monocytes and macrophages.
E R Vossenaar, T R D Radstake, A van der Heijden, M A M van Mansum, C Dieteren, D-J de Rooij, P Barrera, A J W Zendman, W J van Venrooij. Ann Rheum Dis 2004
281
100

Development and evaluation of AS03, an Adjuvant System containing α-tocopherol and squalene in an oil-in-water emulsion.
Nathalie Garçon, David W Vaughn, Arnaud M Didierlaurent. Expert Rev Vaccines 2012
158
100

Aging-dependent alterations in gene expression and a mitochondrial signature of responsiveness to human influenza vaccination.
Juilee Thakar, Subhasis Mohanty, A Phillip West, Samit R Joshi, Ikuyo Ueda, Jean Wilson, Hailong Meng, Tamara P Blevins, Sui Tsang, Mark Trentalange,[...]. Aging (Albany NY) 2015
37
100

Cytoscape: a software environment for integrated models of biomolecular interaction networks.
Paul Shannon, Andrew Markiel, Owen Ozier, Nitin S Baliga, Jonathan T Wang, Daniel Ramage, Nada Amin, Benno Schwikowski, Trey Ideker. Genome Res 2003
100

IRF1 Maintains Optimal Constitutive Expression of Antiviral Genes and Regulates the Early Antiviral Response.
Debasis Panda, Erisa Gjinaj, Mahesh Bachu, Erica Squire, Hilary Novatt, Keiko Ozato, Ronald L Rabin. Front Immunol 2019
20
100

DNA Methylation Dynamics of Human Hematopoietic Stem Cell Differentiation.
Matthias Farlik, Florian Halbritter, Fabian Müller, Fizzah A Choudry, Peter Ebert, Johanna Klughammer, Samantha Farrow, Antonella Santoro, Valerio Ciaurro, Anthony Mathur,[...]. Cell Stem Cell 2016
102
100

Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment.
Jonas Schulte-Schrepping, Nico Reusch, Daniela Paclik, Kevin Baßler, Stephan Schlickeiser, Bowen Zhang, Benjamin Krämer, Tobias Krammer, Sophia Brumhard, Lorenzo Bonaguro,[...]. Cell 2020
251
100

Effector CD8 T cells dedifferentiate into long-lived memory cells.
Ben Youngblood, J Scott Hale, Haydn T Kissick, Eunseon Ahn, Xiaojin Xu, Andreas Wieland, Koichi Araki, Erin E West, Hazem E Ghoneim, Yiping Fan,[...]. Nature 2017
186
100

BCG Educates Hematopoietic Stem Cells to Generate Protective Innate Immunity against Tuberculosis.
Eva Kaufmann, Joaquin Sanz, Jonathan L Dunn, Nargis Khan, Laura E Mendonça, Alain Pacis, Fanny Tzelepis, Erwan Pernet, Anne Dumaine, Jean-Christophe Grenier,[...]. Cell 2018
350
100

Origin and differentiation of human memory CD8 T cells after vaccination.
Rama S Akondy, Mark Fitch, Srilatha Edupuganti, Shu Yang, Haydn T Kissick, Kelvin W Li, Ben A Youngblood, Hossam A Abdelsamed, Donald J McGuire, Kristen W Cohen,[...]. Nature 2017
188
100

Systems Analysis of Immunity to Influenza Vaccination across Multiple Years and in Diverse Populations Reveals Shared Molecular Signatures.
Helder I Nakaya, Thomas Hagan, Sai S Duraisingham, Eva K Lee, Marcin Kwissa, Nadine Rouphael, Daniela Frasca, Merril Gersten, Aneesh K Mehta, Renaud Gaujoux,[...]. Immunity 2015
138
100

Exploration, normalization, and summaries of high density oligonucleotide array probe level data.
Rafael A Irizarry, Bridget Hobbs, Francois Collin, Yasmin D Beazer-Barclay, Kristen J Antonellis, Uwe Scherf, Terence P Speed. Biostatistics 2003
100

NCBI GEO: archive for functional genomics data sets--update.
Tanya Barrett, Stephen E Wilhite, Pierre Ledoux, Carlos Evangelista, Irene F Kim, Maxim Tomashevsky, Kimberly A Marshall, Katherine H Phillippy, Patti M Sherman, Michelle Holko,[...]. Nucleic Acids Res 2013
100

Yellow fever vaccine induces integrated multilineage and polyfunctional immune responses.
Denis Gaucher, René Therrien, Nadia Kettaf, Bastian R Angermann, Geneviève Boucher, Abdelali Filali-Mouhim, Janice M Moser, Riyaz S Mehta, Donald R Drake, Erika Castro,[...]. J Exp Med 2008
411
100

Time-Resolved Analysis Reveals Rapid Dynamics and Broad Scope of the CBP/p300 Acetylome.
Brian T Weinert, Takeo Narita, Shankha Satpathy, Balaji Srinivasan, Bogi K Hansen, Christian Schölz, William B Hamilton, Beth E Zucconi, Wesley W Wang, Wenshe R Liu,[...]. Cell 2018
105
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.