A citation-based method for searching scientific literature

Gianni Carraro, Justin Langerman, Shan Sabri, Zareeb Lorenzana, Arunima Purkayastha, Guangzhu Zhang, Bindu Konda, Cody J Aros, Ben A Calvert, Aleks Szymaniak, Emily Wilson, Michael Mulligan, Priyanka Bhatt, Junjie Lu, Preethi Vijayaraj, Changfu Yao, David W Shia, Andrew J Lund, Edo Israely, Tammy M Rickabaugh, Jason Ernst, Martin Mense, Scott H Randell, Eszter K Vladar, Amy L Ryan, Kathrin Plath, John E Mahoney, Barry R Stripp, Brigitte N Gomperts. Nat Med 2021
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Fatty liver diseases, bile acids, and FXR.
Yan Zhu, Hongxia Liu, Min Zhang, Grace L Guo. Acta Pharm Sin B 2016
49
50

Mast cells activated by SARS-CoV-2 release histamine which increases IL-1 levels causing cytokine storm and inflammatory reaction in COVID-19.
P Conti, Al Caraffa, G Tetè, C E Gallenga, R Ross, S K Kritas, I Frydas, A Younes, P Di Emidio, G Ronconi. J Biol Regul Homeost Agents 2020
19
50

Gastro-oesophageal reflux and gastric aspiration in lung transplant patients with or without chronic rejection.
K Blondeau, V Mertens, B A Vanaudenaerde, G M Verleden, D E Van Raemdonck, D Sifrim, L J Dupont. Eur Respir J 2008
155
50

Effective strategies for managing new Pseudomonas cultures in adults with cystic fibrosis.
Haider Ali, Christopher Orchard, Myril Mariveles, Sandra Scott, Khalid Alshafi, Diana Bilton, Nicholas Simmonds. Eur Respir J 2015
4
50

Characterization of the innate immune response to chronic aspiration in a novel rodent model.
James Z Appel, Sean M Lee, Matthew G Hartwig, Bin Li, Chong-Chao Hsieh, Edward Cantu, Yonghan Yoon, Shu S Lin, William Parker, R Duane Davis. Respir Res 2007
60
50

Bile acid aspiration in suspected ventilator-associated pneumonia.
Yu-Chung Wu, Po-Kuei Hsu, Kang-Cheng Su, Lung-Yu Liu, Cheng-Chien Tsai, Shu-Ho Tsai, Wen-Hu Hsu, Yu-Chin Lee, Diahn-Warng Perng. Chest 2009
31
50

Modulators of CFTR. Updates on clinical development and future directions.
Emmanuelle Bardin, Alexandra Pastor, Michaela Semeraro, Anita Golec, Kate Hayes, Benoit Chevalier, Farouk Berhal, Guillaume Prestat, Alexandre Hinzpeter, Christine Gravier-Pelletier,[...]. Eur J Med Chem 2021
7
50

Bile acids stimulate chloride secretion through CFTR and calcium-activated Cl- channels in Calu-3 airway epithelial cells.
Siobhán M Hendrick, Magdalena S Mroz, Catherine M Greene, Stephen J Keely, Brian J Harvey. Am J Physiol Lung Cell Mol Physiol 2014
18
50

Acid and non-acid reflux during physiotherapy in young children with cystic fibrosis.
Michael Doumit, Usha Krishnan, Adam Jaffé, Yvonne Belessis. Pediatr Pulmonol 2012
17
50

Respiratory pathogens adopt a chronic lifestyle in response to bile.
F Jerry Reen, David F Woods, Marlies J Mooij, Claire Adams, Fergal O'Gara. PLoS One 2012
22
50

The impact of reflux burden on Pseudomonas positivity in children with cystic fibrosis.
Kara Palm, Gregory Sawicki, Rachel Rosen. Pediatr Pulmonol 2012
33
50

The prevalence of gastro-esophageal reflux disease and esophageal dysmotility in Chinese patients with idiopathic pulmonary fibrosis.
Feng Gao, Anthony Robert Hobson, Zhan Min Shang, Yan Xiang Pei, Yan Gao, Jian Xin Wang, Wan Nong Huang. BMC Gastroenterol 2015
15
50

Control of local immunity by airway epithelial cells.
M Weitnauer, V Mijošek, A H Dalpke. Mucosal Immunol 2016
67
50

Risk factors for bronchiectasis in children with cystic fibrosis.
Peter D Sly, Catherine L Gangell, Linping Chen, Robert S Ware, Sarath Ranganathan, Lauren S Mott, Conor P Murray, Stephen M Stick. N Engl J Med 2013
338
50

[The relationship between gastroesophageal reflux disease and idiopathic pulmonary interstitial fibrosis].
Xiu-xia Liang, Zhan-min Shang, Hua-ping Dai, Wan-nong Huang, Jian-yu Hao. Zhonghua Nei Ke Za Zhi 2010
4
50

Frequency, consequences and pharmacological treatment of gastroesophageal reflux in children with cystic fibrosis.
Jacek Brodzicki, Maria Trawińska-Bartnicka, Maria Korzon. Med Sci Monit 2002
35
50

Disordered microbial communities in asthmatic airways.
Markus Hilty, Conor Burke, Helder Pedro, Paul Cardenas, Andy Bush, Cara Bossley, Jane Davies, Aaron Ervine, Len Poulter, Lior Pachter,[...]. PLoS One 2010
915
50

[Gastroesophageal reflux in asthmatic children: prevalence and pathogenic role].
Dorin Farcău, Daniela Dreghiciu, Paraschiva Cherecheş-Panţa, Mirela Popa, Mihaela Farcău, Mircea Nanulescu. Pneumologia 2004
3
50

Expansion of commensal fungus Wallemia mellicola in the gastrointestinal mycobiota enhances the severity of allergic airway disease in mice.
Joseph H Skalski, Jose J Limon, Purnima Sharma, Matthew D Gargus, Christopher Nguyen, Jie Tang, Ana Lucia Coelho, Cory M Hogaboam, Timothy R Crother, David M Underhill. PLoS Pathog 2018
29
50

Association between chronic obstructive pulmonary disease and gastroesophageal reflux disease: a national cross-sectional cohort study.
Jinhee Kim, Jin Hwa Lee, Yuri Kim, Kyungjoo Kim, Yeon-Mok Oh, Kwang Ha Yoo, Chin Kook Rhee, Hyoung Kyu Yoon, Young Sam Kim, Yong Bum Park,[...]. BMC Pulm Med 2013
63
50

Pepsin and bile acids in induced sputum of chronic cough patients.
Marcin Grabowski, Ahmad Kasran, Sven Seys, Ans Pauwels, Wojciech Medrala, Lieven Dupont, Bernard Panaszek, Dominique Bullens. Respir Med 2011
28
50

The lung mycobiome: an emerging field of the human respiratory microbiome.
Linh D N Nguyen, Eric Viscogliosi, Laurence Delhaes. Front Microbiol 2015
113
50

Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis.
Adam M Guss, Guus Roeselers, Irene L G Newton, C Robert Young, Vanja Klepac-Ceraj, Stephen Lory, Colleen M Cavanaugh. ISME J 2011
127
50


Airway microbiota and pathogen abundance in age-stratified cystic fibrosis patients.
Michael J Cox, Martin Allgaier, Byron Taylor, Marshall S Baek, Yvonne J Huang, Rebecca A Daly, Ulas Karaoz, Gary L Andersen, Ronald Brown, Kei E Fujimura,[...]. PLoS One 2010
290
50


Intestinal bile acid malabsorption in cystic fibrosis.
S O'Brien, H Mulcahy, H Fenlon, A O'Broin, M Casey, A Burke, M X FitzGerald, J E Hegarty. Gut 1993
68
50

Impact of dietary sulfolipid-derived sulfoquinovose on gut microbiota composition and inflammatory status of colitis-prone interleukin-10-deficient mice.
Wiebke Burkhardt, Theresa Rausch, Robert Klopfleisch, Michael Blaut, Annett Braune. Int J Med Microbiol 2021
2
50

Clinical mechanism of the cystic fibrosis transmembrane conductance regulator potentiator ivacaftor in G551D-mediated cystic fibrosis.
Steven M Rowe, Sonya L Heltshe, Tanja Gonska, Scott H Donaldson, Drucy Borowitz, Daniel Gelfond, Scott D Sagel, Umer Khan, Nicole Mayer-Hamblett, Jill M Van Dalfsen,[...]. Am J Respir Crit Care Med 2014
283
50


A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients.
Christopher D Sibley, Michael D Parkins, Harvey R Rabin, Kangmin Duan, Jens C Norgaard, Michael G Surette. Proc Natl Acad Sci U S A 2008
236
50


Current and emerging comorbidities in cystic fibrosis.
Nicola J Ronan, Joseph Stuart Elborn, Barry J Plant. Presse Med 2017
27
50


Effects of asymptomatic proximal and distal gastroesophageal reflux on asthma severity.
Emily DiMango, Janet T Holbrook, Erin Simpson, Joan Reibman, Joel Richter, Surinder Narula, Nancy Prusakowski, John G Mastronarde, Robert A Wise. Am J Respir Crit Care Med 2009
32
50

Reflux episode reaching the proximal esophagus are associated with chronic cough.
Jeong-Hyun Lee, Seon-Young Park, Sung-Bum Cho, Wan-Sik Lee, Chang-Hwan Park, Young-Il Koh, Young-Eun Joo, Hyun-Soo Kim, Sung-Kyu Choi, Jong-Sun Rew. Gut Liver 2012
12
50

Microbial diversity in the sputum of a cystic fibrosis patient studied with 16S rDNA pyrosequencing.
F Armougom, F Bittar, N Stremler, J-M Rolain, C Robert, J-C Dubus, J Sarles, D Raoult, B La Scola. Eur J Clin Microbiol Infect Dis 2009
63
50

Exploiting Interkingdom Interactions for Development of Small-Molecule Inhibitors of Candida albicans Biofilm Formation.
F Jerry Reen, John P Phelan, Lorna Gallagher, David F Woods, Rachel M Shanahan, Rafael Cano, Eoin Ó Muimhneacháin, Gerard P McGlacken, Fergal O'Gara. Antimicrob Agents Chemother 2016
11
50

Improved diagnosis of gastro-oesophageal reflux in patients with unexplained chronic cough.
K Blondeau, L J Dupont, V Mertens, J Tack, D Sifrim. Aliment Pharmacol Ther 2007
119
50

Clinical Implications of Polymicrobial Synergism Effects on Antimicrobial Susceptibility.
William Little, Caroline Black, Allie Clinton Smith. Pathogens 2021
1
100

Fitness landscape of antibiotic tolerance in Pseudomonas aeruginosa biofilms.
Sasan Amini, Alison K Hottes, Lincoln E Smith, Saeed Tavazoie. PLoS Pathog 2011
24
50

Gastroesophageal reflux in cystic fibrosis across the age spectrum.
Frederick W Woodley, Don Hayes, Benjamin T Kopp, Melissa Moore-Clingenpeel, Rodrigo Strehl Machado, Christopher J Nemastil, Sudarshan Jadcherla, Carlo Di Lorenzo, Ajay Kaul, Hayat Mousa. Transl Gastroenterol Hepatol 2019
4
50

Prevalence of gastroesophageal reflux in Thai asthmatic patients.
Nattapong Jaimchariyatam, Somkiat Wongtim, Visit Udompanich, Chanchai Sittipunt, Kamon Kawkitinarong, Sataporn Chaiyakul, Sutep Gonlachanvit. J Med Assoc Thai 2011
1
100

The Relationship Between Gastroesophageal Reflux and Chronic Unexplained Cough in Children.
Ivan Pavić, Jasna Čepin-Bogović, Iva Hojsak. Clin Pediatr (Phila) 2016
14
50

Bronchiectasis in infants and preschool children diagnosed with cystic fibrosis after newborn screening.
Stephen M Stick, Siobhain Brennan, Conor Murray, Tonia Douglas, Britta S von Ungern-Sternberg, Luke W Garratt, Catherine L Gangell, Nicholas De Klerk, Barry Linnane, Sarath Ranganathan,[...]. J Pediatr 2009
244
50

Functional rescue of an ABCB11 mutant by ivacaftor: A new targeted pharmacotherapy approach in bile salt export pump deficiency.
Elodie Mareux, Martine Lapalus, Rachida Amzal, Marion Almes, Tounsia Aït-Slimane, Jean-Louis Delaunay, Pauline Adnot, Mauricette Collado-Hilly, Anne Davit-Spraul, Thomas Falguières,[...]. Liver Int 2020
8
50

Comparison of microbiomes from different niches of upper and lower airways in children and adolescents with cystic fibrosis.
Sébastien Boutin, Simon Y Graeber, Michael Weitnauer, Jessica Panitz, Mirjam Stahl, Diana Clausznitzer, Lars Kaderali, Gisli Einarsson, Michael M Tunney, J Stuart Elborn,[...]. PLoS One 2015
88
50


Metabolomic responses to lumacaftor/ivacaftor in cystic fibrosis.
Benjamin T Kopp, Scott McCulloch, Chandra L Shrestha, Shuzhong Zhang, Lisa Sarzynski, Frederick W Woodley, Don Hayes. Pediatr Pulmonol 2018
12
50

Bile acids are present in the lower airways of people with cystic fibrosis.
Ali Aseeri, Malcolm Brodlie, Jim Lordan, Paul Corris, Jeff Pearson, Chris Ward, Nigel Manning. Am J Respir Crit Care Med 2012
13
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.