A citation-based method for searching scientific literature

Joshua Chiou, Ryan J Geusz, Mei-Lin Okino, Jee Yun Han, Michael Miller, Rebecca Melton, Elisha Beebe, Paola Benaglio, Serina Huang, Katha Korgaonkar, Sandra Heller, Alexander Kleger, Sebastian Preissl, David U Gorkin, Maike Sander, Kyle J Gaulton. Nature 2021
Times Cited: 6







List of co-cited articles
21 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Fine mapping of type 1 diabetes susceptibility loci and evidence for colocalization of causal variants with lymphoid gene enhancers.
Suna Onengut-Gumuscu, Wei-Min Chen, Oliver Burren, Nick J Cooper, Aaron R Quinlan, Josyf C Mychaleckyj, Emily Farber, Jessica K Bonnie, Michal Szpak, Ellen Schofield,[...]. Nat Genet 2015
335
50

Genetics of rheumatoid arthritis contributes to biology and drug discovery.
Yukinori Okada, Di Wu, Gosia Trynka, Towfique Raj, Chikashi Terao, Katsunori Ikari, Yuta Kochi, Koichiro Ohmura, Akari Suzuki, Shinji Yoshida,[...]. Nature 2014
50

Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.
John A Todd, Neil M Walker, Jason D Cooper, Deborah J Smyth, Kate Downes, Vincent Plagnol, Rebecca Bailey, Sergey Nejentsev, Sarah F Field, Felicity Payne,[...]. Nat Genet 2007
33

Follow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes.
Struan F A Grant, Hui-Qi Qu, Jonathan P Bradfield, Luc Marchand, Cecilia E Kim, Joseph T Glessner, Rosemarie Grabs, Shayne P Taback, Edward C Frackelton, Andrew W Eckert,[...]. Diabetes 2009
106
33

Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
Jeffrey C Barrett, David G Clayton, Patrick Concannon, Beena Akolkar, Jason D Cooper, Henry A Erlich, Cécile Julier, Grant Morahan, Jørn Nerup, Concepcion Nierras,[...]. Nat Genet 2009
33

The support of human genetic evidence for approved drug indications.
Matthew R Nelson, Hannah Tipney, Jeffery L Painter, Judong Shen, Paola Nicoletti, Yufeng Shen, Aris Floratos, Pak Chung Sham, Mulin Jun Li, Junwen Wang,[...]. Nat Genet 2015
541
33

A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.
Jonathan P Bradfield, Hui-Qi Qu, Kai Wang, Haitao Zhang, Patrick M Sleiman, Cecilia E Kim, Frank D Mentch, Haijun Qiu, Joseph T Glessner, Kelly A Thomas,[...]. PLoS Genet 2011
204
33

Pervasive sharing of genetic effects in autoimmune disease.
Chris Cotsapas, Benjamin F Voight, Elizabeth Rossin, Kasper Lage, Benjamin M Neale, Chris Wallace, Gonçalo R Abecasis, Jeffrey C Barrett, Timothy Behrens, Judy Cho,[...]. PLoS Genet 2011
357
33


A genetics-led approach defines the drug target landscape of 30 immune-related traits.
Hai Fang, Hans De Wolf, Bogdan Knezevic, Katie L Burnham, Julie Osgood, Anna Sanniti, Alicia Lledó Lara, Silva Kasela, Stephane De Cesco, Jörg K Wegner,[...]. Nat Genet 2019
60
33



Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.
Jason D Cooper, Deborah J Smyth, Adam M Smiles, Vincent Plagnol, Neil M Walker, James E Allen, Kate Downes, Jeffrey C Barrett, Barry C Healy, Josyf C Mychaleckyj,[...]. Nat Genet 2008
368
33

METAL: fast and efficient meta-analysis of genomewide association scans.
Cristen J Willer, Yun Li, Gonçalo R Abecasis. Bioinformatics 2010
33

Statistical colocalization of genetic risk variants for related autoimmune diseases in the context of common controls.
Mary D Fortune, Hui Guo, Oliver Burren, Ellen Schofield, Neil M Walker, Maria Ban, Stephen J Sawcer, John Bowes, Jane Worthington, Anne Barton,[...]. Nat Genet 2015
78
33

A novel susceptibility locus for type 1 diabetes on Chr12q13 identified by a genome-wide association study.
Hakon Hakonarson, Hui-Qi Qu, Jonathan P Bradfield, Luc Marchand, Cecilia E Kim, Joseph T Glessner, Rosemarie Grabs, Tracy Casalunovo, Shayne P Taback, Edward C Frackelton,[...]. Diabetes 2008
110
33

Bayesian test for colocalisation between pairs of genetic association studies using summary statistics.
Claudia Giambartolomei, Damjan Vukcevic, Eric E Schadt, Lude Franke, Aroon D Hingorani, Chris Wallace, Vincent Plagnol. PLoS Genet 2014
615
33

An Anti-CD3 Antibody, Teplizumab, in Relatives at Risk for Type 1 Diabetes.
Kevan C Herold, Brian N Bundy, S Alice Long, Jeffrey A Bluestone, Linda A DiMeglio, Matthew J Dufort, Stephen E Gitelman, Peter A Gottlieb, Jeffrey P Krischer, Peter S Linsley,[...]. N Engl J Med 2019
215
33


Benefits and limitations of genome-wide association studies.
Vivian Tam, Nikunj Patel, Michelle Turcotte, Yohan Bossé, Guillaume Paré, David Meyre. Nat Rev Genet 2019
324
33

Fine-mapping, trans-ancestral and genomic analyses identify causal variants, cells, genes and drug targets for type 1 diabetes.
Catherine C Robertson, Jamie R J Inshaw, Suna Onengut-Gumuscu, Wei-Min Chen, David Flores Santa Cruz, Hanzhi Yang, Antony J Cutler, Daniel J M Crouch, Emily Farber, S Louis Bridges,[...]. Nat Genet 2021
17
33

Robust relationship inference in genome-wide association studies.
Ani Manichaikul, Josyf C Mychaleckyj, Stephen S Rich, Kathy Daly, Michèle Sale, Wei-Min Chen. Bioinformatics 2010
925
16

Safety and efficacy of tofacitinib for up to 9.5 years in the treatment of rheumatoid arthritis: final results of a global, open-label, long-term extension study.
Jürgen Wollenhaupt, Eun-Bong Lee, Jeffrey R Curtis, Joel Silverfield, Ketti Terry, Koshika Soma, Chris Mojcik, Ryan DeMasi, Sander Strengholt, Kenneth Kwok,[...]. Arthritis Res Ther 2019
105
16

Landscape of stimulation-responsive chromatin across diverse human immune cells.
Diego Calderon, Michelle L T Nguyen, Anja Mezger, Arwa Kathiria, Fabian Müller, Vinh Nguyen, Ninnia Lescano, Beijing Wu, John Trombetta, Jessica V Ribado,[...]. Nat Genet 2019
52
16

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
16

Type 1 Diabetes Risk in African-Ancestry Participants and Utility of an Ancestry-Specific Genetic Risk Score.
Suna Onengut-Gumuscu, Wei-Min Chen, Catherine C Robertson, Jessica K Bonnie, Emily Farber, Zhennan Zhu, Jorge R Oksenberg, Steven R Brant, S Louis Bridges, Jeffrey C Edberg,[...]. Diabetes Care 2019
28
16

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data.
Kai Wang, Mingyao Li, Hakon Hakonarson. Nucleic Acids Res 2010
16


Impact of Genetic Polymorphisms on Human Immune Cell Gene Expression.
Benjamin J Schmiedel, Divya Singh, Ariel Madrigal, Alan G Valdovino-Gonzalez, Brandie M White, Jose Zapardiel-Gonzalo, Brendan Ha, Gokmen Altay, Jason A Greenbaum, Graham McVicker,[...]. Cell 2018
186
16

Fine-mapping and functional studies highlight potential causal variants for rheumatoid arthritis and type 1 diabetes.
Harm-Jan Westra, Marta Martínez-Bonet, Suna Onengut-Gumuscu, Annette Lee, Yang Luo, Nikola Teslovich, Jane Worthington, Javier Martin, Tom Huizinga, Lars Klareskog,[...]. Nat Genet 2018
58
16

BEDOPS: high-performance genomic feature operations.
Shane Neph, M Scott Kuehn, Alex P Reynolds, Eric Haugen, Robert E Thurman, Audra K Johnson, Eric Rynes, Matthew T Maurano, Jeff Vierstra, Sean Thomas,[...]. Bioinformatics 2012
379
16

The chromosome 6q22.33 region is associated with age at diagnosis of type 1 diabetes and disease risk in those diagnosed under 5 years of age.
Jamie R J Inshaw, Neil M Walker, Chris Wallace, Leonardo Bottolo, John A Todd. Diabetologia 2018
16
16

Second-generation PLINK: rising to the challenge of larger and richer datasets.
Christopher C Chang, Carson C Chow, Laurent Cam Tellier, Shashaank Vattikuti, Shaun M Purcell, James J Lee. Gigascience 2015
16

Bach2 maintains T cells in a naive state by suppressing effector memory-related genes.
Shin-ichi Tsukumo, Midori Unno, Akihiko Muto, Arata Takeuchi, Kohei Kometani, Tomohiro Kurosaki, Kazuhiko Igarashi, Takashi Saito. Proc Natl Acad Sci U S A 2013
84
16

Integrating case-control and TDT studies.
G R Kazeem, M Farrall. Ann Hum Genet 2005
139
16

Dynamic evolution of regulatory element ensembles in primate CD4+ T cells.
Charles G Danko, Lauren A Choate, Brooke A Marks, Edward J Rice, Zhong Wang, Tinyi Chu, Andre L Martins, Noah Dukler, Scott A Coonrod, Elia D Tait Wojno,[...]. Nat Ecol Evol 2018
31
16

Hope vs hype: where are we in type 1 diabetes?
Jay S Skyler. Diabetologia 2018
23
16

Prospects of Fine-Mapping Trait-Associated Genomic Regions by Using Summary Statistics from Genome-wide Association Studies.
Christian Benner, Aki S Havulinna, Marjo-Riitta Järvelin, Veikko Salomaa, Samuli Ripatti, Matti Pirinen. Am J Hum Genet 2017
66
16


Long-range LD can confound genome scans in admixed populations.
Alkes L Price, Michael E Weale, Nick Patterson, Simon R Myers, Anna C Need, Kevin V Shianna, Dongliang Ge, Jerome I Rotter, Esther Torres, Kent D Taylor,[...]. Am J Hum Genet 2008
203
16


Genetic regulatory signatures underlying islet gene expression and type 2 diabetes.
Arushi Varshney, Laura J Scott, Ryan P Welch, Michael R Erdos, Peter S Chines, Narisu Narisu, Ricardo D'O Albanus, Peter Orchard, Brooke N Wolford, Romy Kursawe,[...]. Proc Natl Acad Sci U S A 2017
96
16

Risankizumab in patients with moderate to severe Crohn's disease: an open-label extension study.
Brian G Feagan, Julián Panés, Marc Ferrante, Arthur Kaser, Geert R D'Haens, William J Sandborn, Edouard Louis, Markus F Neurath, Denis Franchimont, Olivier Dewit,[...]. Lancet Gastroenterol Hepatol 2018
68
16

A Transcriptomic and Epigenomic Comparison of Fetal and Adult Human Cardiac Fibroblasts Reveals Novel Key Transcription Factors in Adult Cardiac Fibroblasts.
Malin K B Jonsson, Robin J G Hartman, Matthew Ackers-Johnson, Wilson L W Tan, Bing Lim, Toon A B van Veen, Roger S Foo. JACC Basic Transl Sci 2016
22
16

Genome-wide analysis of the genetic regulation of gene expression in human neutrophils.
Anand Kumar Andiappan, Rossella Melchiotti, Tuang Yeow Poh, Michelle Nah, Kia Joo Puan, Elena Vigano, Doreen Haase, Nurhashikin Yusof, Boris San Luis, Josephine Lum,[...]. Nat Commun 2015
21
16

Promise and pitfalls of the Immunochip.
Adrian Cortes, Matthew A Brown. Arthritis Res Ther 2011
332
16

Systematic identification of trans eQTLs as putative drivers of known disease associations.
Harm-Jan Westra, Marjolein J Peters, Tõnu Esko, Hanieh Yaghootkar, Claudia Schurmann, Johannes Kettunen, Mark W Christiansen, Benjamin P Fairfax, Katharina Schramm, Joseph E Powell,[...]. Nat Genet 2013
16

Abundant associations with gene expression complicate GWAS follow-up.
Boxiang Liu, Michael J Gloudemans, Abhiram S Rao, Erik Ingelsson, Stephen B Montgomery. Nat Genet 2019
61
16

Shared genetic risk contributes to type 1 and type 2 diabetes etiology.
Anthony Aylward, Joshua Chiou, Mei-Lin Okino, Nikita Kadakia, Kyle J Gaulton. Hum Mol Genet 2018
20
16

BACH2 immunodeficiency illustrates an association between super-enhancers and haploinsufficiency.
Behdad Afzali, Juha Grönholm, Jana Vandrovcova, Charlotte O'Brien, Hong-Wei Sun, Ine Vanderleyden, Fred P Davis, Ahmad Khoder, Yu Zhang, Ahmed N Hegazy,[...]. Nat Immunol 2017
64
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.