A citation-based method for searching scientific literature

Aleksandar Obradovic, Nivedita Chowdhury, Scott M Haake, Casey Ager, Vinson Wang, Lukas Vlahos, Xinzheng V Guo, David H Aggen, W Kimryn Rathmell, Eric Jonasch, Joyce E Johnson, Marc Roth, Kathryn E Beckermann, Brian I Rini, James McKiernan, Andrea Califano, Charles G Drake. Cell 2021
Times Cited: 6







List of co-cited articles
5 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Epigenetic stability of exhausted T cells limits durability of reinvigoration by PD-1 blockade.
Kristen E Pauken, Morgan A Sammons, Pamela M Odorizzi, Sasikanth Manne, Jernej Godec, Omar Khan, Adam M Drake, Zeyu Chen, Debattama R Sen, Makoto Kurachi,[...]. Science 2016
533
33

Subsets of exhausted CD8+ T cells differentially mediate tumor control and respond to checkpoint blockade.
Brian C Miller, Debattama R Sen, Rose Al Abosy, Kevin Bi, Yamini V Virkud, Martin W LaFleur, Kathleen B Yates, Ana Lako, Kristen Felt, Girish S Naik,[...]. Nat Immunol 2019
404
33


STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
33

Spatial reconstruction of single-cell gene expression data.
Rahul Satija, Jeffrey A Farrell, David Gennert, Alexander F Schier, Aviv Regev. Nat Biotechnol 2015
33

Tumor Cell-Intrinsic Factors Underlie Heterogeneity of Immune Cell Infiltration and Response to Immunotherapy.
Jinyang Li, Katelyn T Byrne, Fangxue Yan, Taiji Yamazoe, Zeyu Chen, Timour Baslan, Lee P Richman, Jeffrey H Lin, Yu H Sun, Andrew J Rech,[...]. Immunity 2018
226
16

Cholesterol Activates Cyclic AMP Signaling in Metaplastic Acinar Cells.
Francesca Grisan, Martina Spacci, Carlotta Paoli, Andrea Costamagna, Marco Fantuz, Miriam Martini, Konstantinos Lefkimmiatis, Alessandro Carrer. Metabolites 2021
2
50


Apolipoprotein E Promotes Immune Suppression in Pancreatic Cancer through NF-κB-Mediated Production of CXCL1.
Samantha B Kemp, Eileen S Carpenter, Nina G Steele, Katelyn L Donahue, Zeribe C Nwosu, Amanda Pacheco, Ashley Velez-Delgado, Rosa E Menjivar, Fatima Lima, Stephanie The,[...]. Cancer Res 2021
3
33

Acute Loss of Apolipoprotein E Triggers an Autoimmune Response That Accelerates Atherosclerosis.
Monica Centa, Kajsa E Prokopec, Manasa G Garimella, Katrin Habir, Lisa Hofste, Julian M Stark, Albert Dahdah, Chris A Tibbitt, Konstantinos A Polyzos, Anton Gisterå,[...]. Arterioscler Thromb Vasc Biol 2018
23
16

Cholesterol Pathway Inhibition Induces TGF-β Signaling to Promote Basal Differentiation in Pancreatic Cancer.
Linara Gabitova-Cornell, Aizhan Surumbayeva, Suraj Peri, Janusz Franco-Barraza, Diana Restifo, Nicole Weitz, Charline Ogier, Aaron R Goldman, Tiffiney R Hartman, Ralph Francescone,[...]. Cancer Cell 2020
20
16

Cholesterol Accumulation in CD11c+ Immune Cells Is a Causal and Targetable Factor in Autoimmune Disease.
Ayaka Ito, Cynthia Hong, Kazuhiro Oka, Jon V Salazar, Cody Diehl, Joseph L Witztum, Mercedes Diaz, Antonio Castrillo, Steven J Bensinger, Lawrence Chan,[...]. Immunity 2016
52
16

LXR/ApoE Activation Restricts Innate Immune Suppression in Cancer.
Masoud F Tavazoie, Ilana Pollack, Raissa Tanqueco, Benjamin N Ostendorf, Bernardo S Reis, Foster C Gonsalves, Isabel Kurth, Celia Andreu-Agullo, Mark L Derbyshire, Jessica Posada,[...]. Cell 2018
149
16

SOAT1 promotes mevalonate pathway dependency in pancreatic cancer.
Tobiloba E Oni, Giulia Biffi, Lindsey A Baker, Yuan Hao, Claudia Tonelli, Tim D D Somerville, Astrid Deschênes, Pascal Belleau, Chang-Il Hwang, Francisco J Sánchez-Rivera,[...]. J Exp Med 2020
20
16

Depletion of Tumor-Associated Macrophages with a CSF-1R Kinase Inhibitor Enhances Antitumor Immunity and Survival Induced by DC Immunotherapy.
Floris Dammeijer, Lysanne A Lievense, Margaretha E Kaijen-Lambers, Menno van Nimwegen, Koen Bezemer, Joost P Hegmans, Thorbald van Hall, Rudi W Hendriks, Joachim G Aerts. Cancer Immunol Res 2017
69
16

Comprehensive Integration of Single-Cell Data.
Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
16

Dissecting the tumor myeloid compartment reveals rare activating antigen-presenting cells critical for T cell immunity.
Miranda L Broz, Mikhail Binnewies, Bijan Boldajipour, Amanda E Nelson, Joshua L Pollack, David J Erle, Andrea Barczak, Michael D Rosenblum, Adil Daud, Diane L Barber,[...]. Cancer Cell 2014
508
16

TREM2 Modulation Remodels the Tumor Myeloid Landscape Enhancing Anti-PD-1 Immunotherapy.
Martina Molgora, Ekaterina Esaulova, William Vermi, Jinchao Hou, Yun Chen, Jingqin Luo, Simone Brioschi, Mattia Bugatti, Andrea Salvatore Omodei, Biancamaria Ricci,[...]. Cell 2020
59
16

Targeting tumour-associated macrophages with CCR2 inhibition in combination with FOLFIRINOX in patients with borderline resectable and locally advanced pancreatic cancer: a single-centre, open-label, dose-finding, non-randomised, phase 1b trial.
Timothy M Nywening, Andrea Wang-Gillam, Dominic E Sanford, Brian A Belt, Roheena Z Panni, Brian M Cusworth, Adetunji T Toriola, Rebecca K Nieman, Lori A Worley, Motoyo Yano,[...]. Lancet Oncol 2016
336
16

Anti-PD-L1 Treatment Results in Functional Remodeling of the Macrophage Compartment.
Huizhong Xiong, Stephanie Mittman, Ryan Rodriguez, Marina Moskalenko, Patricia Pacheco-Sanchez, Yagai Yang, Dorothee Nickles, Rafael Cubas. Cancer Res 2019
50
16

Unraveling the Complex Interplay Between T Cell Metabolism and Function.
Ramon I Klein Geltink, Ryan L Kyle, Erika L Pearce. Annu Rev Immunol 2018
238
16

Macrophage IL-10 blocks CD8+ T cell-dependent responses to chemotherapy by suppressing IL-12 expression in intratumoral dendritic cells.
Brian Ruffell, Debbie Chang-Strachan, Vivien Chan, Alexander Rosenbusch, Christine M T Ho, Nancy Pryer, Dylan Daniel, E Shelley Hwang, Hope S Rugo, Lisa M Coussens. Cancer Cell 2014
440
16

Antitumor activity and safety of pembrolizumab in patients with advanced recurrent ovarian cancer: results from the phase II KEYNOTE-100 study.
U A Matulonis, R Shapira-Frommer, A D Santin, A S Lisyanskaya, S Pignata, I Vergote, F Raspagliesi, G S Sonke, M Birrer, D M Provencher,[...]. Ann Oncol 2019
187
16

Mechanisms of resistance to immune checkpoint inhibitors.
Russell W Jenkins, David A Barbie, Keith T Flaherty. Br J Cancer 2018
467
16


A distinct macrophage population mediates metastatic breast cancer cell extravasation, establishment and growth.
Binzhi Qian, Yan Deng, Jae Hong Im, Ruth J Muschel, Yiyu Zou, Jiufeng Li, Richard A Lang, Jeffrey W Pollard. PLoS One 2009
429
16


Tuning the Tumor Myeloid Microenvironment to Fight Cancer.
Nadine S Jahchan, Adriana M Mujal, Joshua L Pollack, Mikhail Binnewies, Venkataraman Sriram, Leonard Reyno, Matthew F Krummel. Front Immunol 2019
41
16

Tumour and host cell PD-L1 is required to mediate suppression of anti-tumour immunity in mice.
Janet Lau, Jeanne Cheung, Armando Navarro, Steve Lianoglou, Benjamin Haley, Klara Totpal, Laura Sanders, Hartmut Koeppen, Patrick Caplazi, Jacqueline McBride,[...]. Nat Commun 2017
167
16

Prognostic significance of tumor-associated macrophages in solid tumor: a meta-analysis of the literature.
Qiong-wen Zhang, Lei Liu, Chang-yang Gong, Hua-shan Shi, Yun-hui Zeng, Xiao-ze Wang, Yu-wei Zhao, Yu-quan Wei. PLoS One 2012
526
16

Human Tumor-Associated Macrophage and Monocyte Transcriptional Landscapes Reveal Cancer-Specific Reprogramming, Biomarkers, and Therapeutic Targets.
Luca Cassetta, Stamatina Fragkogianni, Andrew H Sims, Agnieszka Swierczak, Lesley M Forrester, Hui Zhang, Daniel Y H Soong, Tiziana Cotechini, Pavana Anur, Elaine Y Lin,[...]. Cancer Cell 2019
252
16

Warburg metabolism in tumor-conditioned macrophages promotes metastasis in human pancreatic ductal adenocarcinoma.
Hweixian Leong Penny, Je Lin Sieow, Giulia Adriani, Wei Hseun Yeap, Peter See Chi Ee, Boris San Luis, Bernett Lee, Terence Lee, Shi Ya Mak, Ying Swan Ho,[...]. Oncoimmunology 2016
114
16

High-Dimensional Analysis Delineates Myeloid and Lymphoid Compartment Remodeling during Successful Immune-Checkpoint Cancer Therapy.
Matthew M Gubin, Ekaterina Esaulova, Jeffrey P Ward, Olga N Malkova, Daniele Runci, Pamela Wong, Takuro Noguchi, Cora D Arthur, Wei Meng, Elise Alspach,[...]. Cell 2018
117
16

Folate receptor beta is expressed by tumor-associated macrophages and constitutes a marker for M2 anti-inflammatory/regulatory macrophages.
Amaya Puig-Kröger, Elena Sierra-Filardi, Angeles Domínguez-Soto, Rafael Samaniego, María Teresa Corcuera, Fernando Gómez-Aguado, Manohar Ratnam, Paloma Sánchez-Mateos, Angel L Corbí. Cancer Res 2009
229
16

Clinical significance of macrophage heterogeneity in human malignant tumors.
Yoshihiro Komohara, Masahisa Jinushi, Motohiro Takeya. Cancer Sci 2014
279
16

Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome.
Richard W Tothill, Anna V Tinker, Joshy George, Robert Brown, Stephen B Fox, Stephen Lade, Daryl S Johnson, Melanie K Trivett, Dariush Etemadmoghadam, Bianca Locandro,[...]. Clin Cancer Res 2008
913
16

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells.
Cole Trapnell, Davide Cacchiarelli, Jonna Grimsby, Prapti Pokharel, Shuqiang Li, Michael Morse, Niall J Lennon, Kenneth J Livak, Tarjei S Mikkelsen, John L Rinn. Nat Biotechnol 2014
16

GEPIA2: an enhanced web server for large-scale expression profiling and interactive analysis.
Zefang Tang, Boxi Kang, Chenwei Li, Tianxiang Chen, Zemin Zhang. Nucleic Acids Res 2019
653
16

Post-translational modifications differentially affect IgG1 conformation and receptor binding.
Damian Houde, Yucai Peng, Steven A Berkowitz, John R Engen. Mol Cell Proteomics 2010
266
16

Coupled scRNA-Seq and Intracellular Protein Activity Reveal an Immunosuppressive Role of TREM2 in Cancer.
Yonatan Katzenelenbogen, Fadi Sheban, Adam Yalin, Ido Yofe, Dmitry Svetlichnyy, Diego Adhemar Jaitin, Chamutal Bornstein, Adi Moshe, Hadas Keren-Shaul, Merav Cohen,[...]. Cell 2020
63
16

CTLA-4 can function as a negative regulator of T cell activation.
T L Walunas, D J Lenschow, C Y Bakker, P S Linsley, G J Freeman, J M Green, C B Thompson, J A Bluestone. Immunity 1994
16

Expression of the PD-1 antigen on the surface of stimulated mouse T and B lymphocytes.
Y Agata, A Kawasaki, H Nishimura, Y Ishida, T Tsubata, H Yagita, T Honjo. Int Immunol 1996
990
16

Mismatch repair deficiency predicts response of solid tumors to PD-1 blockade.
Dung T Le, Jennifer N Durham, Kellie N Smith, Hao Wang, Bjarne R Bartlett, Laveet K Aulakh, Steve Lu, Holly Kemberling, Cara Wilt, Brandon S Luber,[...]. Science 2017
16

BRAF Inhibition Stimulates Melanoma-Associated Macrophages to Drive Tumor Growth.
Tao Wang, Min Xiao, Yingbin Ge, Clemens Krepler, Eric Belser, Alfonso Lopez-Coral, Xiaowei Xu, Gao Zhang, Rikka Azuma, Qin Liu,[...]. Clin Cancer Res 2015
68
16

Chromatin states define tumour-specific T cell dysfunction and reprogramming.
Mary Philip, Lauren Fairchild, Liping Sun, Ellen L Horste, Steven Camara, Mojdeh Shakiba, Andrew C Scott, Agnes Viale, Peter Lauer, Taha Merghoub,[...]. Nature 2017
339
16

Antitumor activity of lurbinectedin (PM01183) and doxorubicin in relapsed small-cell lung cancer: results from a phase I study.
E Calvo, V Moreno, M Flynn, E Holgado, M E Olmedo, M P Lopez Criado, C Kahatt, J A Lopez-Vilariño, M Siguero, C Fernandez-Teruel,[...]. Ann Oncol 2017
44
16

Lack of fucose on human IgG1 N-linked oligosaccharide improves binding to human Fcgamma RIII and antibody-dependent cellular toxicity.
Robert L Shields, Jadine Lai, Rodney Keck, Lori Y O'Connell, Kyu Hong, Y Gloria Meng, Stefanie H A Weikert, Leonard G Presta. J Biol Chem 2002
16

Distinct role of macrophages in different tumor microenvironments.
Claire E Lewis, Jeffrey W Pollard. Cancer Res 2006
16

A pan-cancer single-cell transcriptional atlas of tumor infiltrating myeloid cells.
Sijin Cheng, Ziyi Li, Ranran Gao, Baocai Xing, Yunong Gao, Yu Yang, Shishang Qin, Lei Zhang, Hanqiang Ouyang, Peng Du,[...]. Cell 2021
38
16

Tumor-associated macrophages subvert T-cell function and correlate with reduced survival in clear cell renal cell carcinoma.
Stefanie Regine Dannenmann, Julia Thielicke, Martina Stöckli, Claudia Matter, Lotta von Boehmer, Virginia Cecconi, Thomas Hermanns, Lukas Hefermehl, Peter Schraml, Holger Moch,[...]. Oncoimmunology 2013
99
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.