A citation-based method for searching scientific literature

Nicole A Edwards, Vered Shacham-Silverberg, Leelah Weitz, Paul S Kingma, Yufeng Shen, James M Wells, Wendy K Chung, Aaron M Zorn. Dev Biol 2021
Times Cited: 4







List of co-cited articles
15 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Single cell transcriptomics identifies a signaling network coordinating endoderm and mesoderm diversification during foregut organogenesis.
Lu Han, Praneet Chaturvedi, Keishi Kishimoto, Hiroyuki Koike, Talia Nasr, Kentaro Iwasawa, Kirsten Giesbrecht, Phillip C Witcher, Alexandra Eicher, Lauren Haines,[...]. Nat Commun 2020
60
75

Endosome-Mediated Epithelial Remodeling Downstream of Hedgehog-Gli Is Required for Tracheoesophageal Separation.
Talia Nasr, Pamela Mancini, Scott A Rankin, Nicole A Edwards, Zachary N Agricola, Alan P Kenny, Jessica L Kinney, Keziah Daniels, Jon Vardanyan, Lu Han,[...]. Dev Cell 2019
24
75

Esophageal Organoids from Human Pluripotent Stem Cells Delineate Sox2 Functions during Esophageal Specification.
Stephen L Trisno, Katherine E D Philo, Kyle W McCracken, Emily M Catá, Sonya Ruiz-Torres, Scott A Rankin, Lu Han, Talia Nasr, Praneet Chaturvedi, Marc E Rothenberg,[...]. Cell Stem Cell 2018
77
75

A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification.
Scott A Rankin, Lu Han, Kyle W McCracken, Alan P Kenny, Christopher T Anglin, Emily A Grigg, Calyn M Crawford, James M Wells, John M Shannon, Aaron M Zorn. Cell Rep 2016
67
50

Signaling through BMP receptors promotes respiratory identity in the foregut via repression of Sox2.
Eric T Domyan, Elisabetta Ferretti, Kurt Throckmorton, Yuji Mishina, Silvia K Nicolis, Xin Sun. Development 2011
136
50

One shall become two: Separation of the esophagus and trachea from the common foregut tube.
Katherine Kretovich Billmyre, Mary Hutson, John Klingensmith. Dev Dyn 2015
33
50

Barx1-mediated inhibition of Wnt signaling in the mouse thoracic foregut controls tracheo-esophageal septation and epithelial differentiation.
Janghee Woo, Isabelle Miletich, Byeong-Moo Kim, Paul T Sharpe, Ramesh A Shivdasani. PLoS One 2011
50
50

Morphogenesis of the trachea and esophagus: current players and new roles for noggin and Bmps.
Jianwen Que, Murim Choi, Joshua W Ziel, John Klingensmith, Brigid L M Hogan. Differentiation 2006
168
50

Multiple dose-dependent roles for Sox2 in the patterning and differentiation of anterior foregut endoderm.
Jianwen Que, Tadashi Okubo, James R Goldenring, Ki-Taek Nam, Reiko Kurotani, Edward E Morrisey, Olena Taranova, Larysa H Pevny, Brigid L M Hogan. Development 2007
365
50

Oesophageal atresia.
Marinde van Lennep, Maartje M J Singendonk, Luigi Dall'Oglio, Fréderic Gottrand, Usha Krishnan, Suzanne W J Terheggen-Lagro, Taher I Omari, Marc A Benninga, Michiel P van Wijk. Nat Rev Dis Primers 2019
46
50

Novel candidate genes in esophageal atresia/tracheoesophageal fistula identified by exome sequencing.
Jiayao Wang, Priyanka R Ahimaz, Somaye Hashemifar, Julie Khlevner, Joseph A Picoraro, William Middlesworth, Mahmoud M Elfiky, Jianwen Que, Yufeng Shen, Wendy K Chung. Eur J Hum Genet 2021
6
50

Aberrant Bmp signaling and notochord delamination in the pathogenesis of esophageal atresia.
Yina Li, Ying Litingtung, Peter Ten Dijke, Chin Chiang. Dev Dyn 2007
54
50

Delineating the early transcriptional specification of the mammalian trachea and esophagus.
Akela Kuwahara, Ace E Lewis, Coohleen Coombes, Fang-Shiuan Leung, Michelle Percharde, Jeffrey O Bush. Elife 2020
17
50

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
Sue Richards, Nazneen Aziz, Sherri Bale, David Bick, Soma Das, Julie Gastier-Foster, Wayne W Grody, Madhuri Hegde, Elaine Lyon, Elaine Spector,[...]. Genet Med 2015
50

Obtaining Xenopus tropicalis Embryos by In Vitro Fertilization.
Maura Lane, Mustafa K Khokha. Cold Spring Harb Protoc 2022
11
50

New insights into the generation and role of de novo mutations in health and disease.
Rocio Acuna-Hidalgo, Joris A Veltman, Alexander Hoischen. Genome Biol 2016
204
25

Heterozygous loss of WBP11 function causes multiple congenital defects in humans and mice.
Ella M M A Martin, Annabelle Enriquez, Duncan B Sparrow, David T Humphreys, Aideen M McInerney-Leo, Paul J Leo, Emma L Duncan, Kavitha R Iyer, Joelene A Greasby, Eddie Ip,[...]. Hum Mol Genet 2020
8
25

The organizer factors Chordin and Noggin are required for mouse forebrain development.
D Bachiller, J Klingensmith, C Kemp, J A Belo, R M Anderson, S R May, J A McMahon, A P McMahon, R M Harland, J Rossant,[...]. Nature 2000
389
25

Copy number variations in 375 patients with oesophageal atresia and/or tracheoesophageal fistula.
Erwin Brosens, Florian Marsch, Elisabeth M de Jong, Hitisha P Zaveri, Alina C Hilger, Vera Gisela Choinitzki, Alice Hölscher, Per Hoffmann, Stefan Herms, Thomas M Boemers,[...]. Eur J Hum Genet 2016
20
25


Non-VACTERL-type anomalies are frequent in patients with esophageal atresia/tracheo-esophageal fistula and full or partial VACTERL association.
Elisabeth M de Jong, Janine F Felix, Jacqueline A Deurloo, Marieke F van Dooren, Daniël C Aronson, Claudine P Torfs, Hugo A Heij, Dick Tibboel. Birth Defects Res A Clin Mol Teratol 2008
56
25

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data.
Kai Wang, Mingyao Li, Hakon Hakonarson. Nucleic Acids Res 2010
25

Sonic hedgehog is essential to foregut development.
Y Litingtung, L Lei, H Westphal, C Chiang. Nat Genet 1998
523
25

NARWHAL, a primary analysis pipeline for NGS data.
R W W Brouwer, M C G N van den Hout, F G Grosveld, W F J van Ijcken. Bioinformatics 2012
36
25

The role of chordin/Bmp signals in mammalian pharyngeal development and DiGeorge syndrome.
Daniel Bachiller, John Klingensmith, Natalya Shneyder, Uyen Tran, Ryan Anderson, Janet Rossant, E M De Robertis. Development 2003
119
25

Risk of oesophageal cancer in Barrett's oesophagus and gastro-oesophageal reflux.
M Solaymani-Dodaran, R F A Logan, J West, T Card, C Coupland. Gut 2004
209
25

Monozygotic twins discordant for neurofibromatosis 1.
Lee Kaplan, Rosemary Foster, Yiping Shen, Dilys M Parry, Mary L McMaster, Melanie Collins O'Leary, James F Gusella. Am J Med Genet A 2010
27
25

Copy number detection in discordant monozygotic twins of Congenital Diaphragmatic Hernia (CDH) and Esophageal Atresia (EA) cohorts.
Danielle Veenma, Erwin Brosens, Elisabeth de Jong, Cees van de Ven, Connie Meeussen, Titia Cohen-Overbeek, Marjan Boter, Hubertus Eussen, Hannie Douben, Dick Tibboel,[...]. Eur J Hum Genet 2012
19
25

Second study on the recurrence risk of isolated esophageal atresia with or without trachea-esophageal fistula among first-degree relatives: no evidence for increased risk of recurrence of EA/TEF or for malformations of the VATER/VACTERL association spectrum.
Vera Choinitzki, Nadine Zwink, Enrika Bartels, Friederike Baudisch, Thomas M Boemers, Alice Hölscher, Salmai Turial, Haitham Bachour, Andreas Heydweiller, Ralf Kurz,[...]. Birth Defects Res A Clin Mol Teratol 2013
7
25

Bmp4 is required for tracheal formation: a novel mouse model for tracheal agenesis.
Yina Li, Julie Gordon, Nancy R Manley, Ying Litingtung, Chin Chiang. Dev Biol 2008
77
25

Individual crypt genetic heterogeneity and the origin of metaplastic glandular epithelium in human Barrett's oesophagus.
S J Leedham, S L Preston, S A C McDonald, G Elia, P Bhandari, D Poller, R Harrison, M R Novelli, J A Jankowski, N A Wright. Gut 2008
161
25

Twinning.
Judith G Hall. Lancet 2003
373
25

Phenotypically concordant and discordant monozygotic twins display different DNA copy-number-variation profiles.
Carl E G Bruder, Arkadiusz Piotrowski, Antoinet A C J Gijsbers, Robin Andersson, Stephen Erickson, Teresita Diaz de Ståhl, Uwe Menzel, Johanna Sandgren, Desiree von Tell, Andrzej Poplawski,[...]. Am J Hum Genet 2008
329
25

Depletion of definitive gut endoderm in Sox17-null mutant mice.
Masami Kanai-Azuma, Yoshiakira Kanai, Jacqueline M Gad, Youichi Tajima, Choji Taya, Masamichi Kurohmaru, Yutaka Sanai, Hiromichi Yonekawa, Kazumori Yazaki, Patrick P L Tam,[...]. Development 2002
498
25


Tissue morphogenesis and vascular stability require the Frem2 protein, product of the mouse myelencephalic blebs gene.
John R Timmer, Tracy W Mak, Katia Manova, Kathryn V Anderson, Lee Niswander. Proc Natl Acad Sci U S A 2005
45
25

Modern outcomes of oesophageal atresia: single centre experience over the last twenty years.
Antti I Koivusalo, Mikko P Pakarinen, Risto J Rintala. J Pediatr Surg 2013
73
25

Essential function of Gli2 and Gli3 in the formation of lung, trachea and oesophagus.
J Motoyama, J Liu, R Mo, Q Ding, M Post, C C Hui. Nat Genet 1998
417
25


High Prevalence of Barrett's Esophagus and Esophageal Squamous Cell Carcinoma After Repair of Esophageal Atresia.
Floor W T Vergouwe, Hanneke IJsselstijn, Katharina Biermann, Nicole S Erler, René M H Wijnen, Marco J Bruno, Manon C W Spaander. Clin Gastroenterol Hepatol 2018
21
25

E3 ubiquitin ligase MDM2 acts through p53 to control respiratory progenitor cell number and lung size.
Pengfei Sui, Rongbo Li, Yan Zhang, Chunting Tan, Ankur Garg, Jamie M Verheyden, Xin Sun. Development 2019
9
25

Cardiac malformations and midline skeletal defects in mice lacking filamin A.
Alan W Hart, Joanne E Morgan, Jürgen Schneider, Katrine West, Lisa McKie, Shoumo Bhattacharya, Ian J Jackson, Sally H Cross. Hum Mol Genet 2006
119
25

Loss of function mutation of Eftud2, the gene responsible for mandibulofacial dysostosis with microcephaly (MFDM), leads to pre-implantation arrest in mouse.
Marie-Claude Beauchamp, Anissa Djedid, Kevin Daupin, Kayla Clokie, Shruti Kumar, Jacek Majewski, Loydie Anne Jerome-Majewska. PLoS One 2019
13
25

Chromosomal anomalies in the aetiology of oesophageal atresia and tracheo-oesophageal fistula.
Janine F Felix, Dick Tibboel, Annelies de Klein. Eur J Med Genet 2007
50
25


A resource of targeted mutant mouse lines for 5,061 genes.
Marie-Christine Birling, Atsushi Yoshiki, David J Adams, Shinya Ayabe, Arthur L Beaudet, Joanna Bottomley, Allan Bradley, Steve D M Brown, Antje Bürger, Wendy Bushell,[...]. Nat Genet 2021
31
25

Differences between germline genomes of monozygotic twins.
Hakon Jonsson, Erna Magnusdottir, Hannes P Eggertsson, Olafur A Stefansson, Gudny A Arnadottir, Ogmundur Eiriksson, Florian Zink, Einar A Helgason, Ingileif Jonsdottir, Arnaldur Gylfason,[...]. Nat Genet 2021
30
25

A complex syndrome of left-right axis, central nervous system and axial skeleton defects in Zic3 mutant mice.
Smita M Purandare, Stephanie M Ware, Kin Ming Kwan, Marinella Gebbia, Maria Teresa Bassi, Jian Min Deng, Hannes Vogel, Richard R Behringer, John W Belmont, Brett Casey. Development 2002
127
25

The concerted action of Meox homeobox genes is required upstream of genetic pathways essential for the formation, patterning and differentiation of somites.
Baljinder S Mankoo, Susan Skuntz, Ian Harrigan, Elena Grigorieva, Al Candia, Christopher V E Wright, Heinz Arnheiter, Vassilis Pachnis. Development 2003
131
25

"Bent-Tail," A Dominant, Sex-Linked Mutation in the Mouse.
E D Garber. Proc Natl Acad Sci U S A 1952
35
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.