A citation-based method for searching scientific literature

Biosensing with DNAzymes.
Erin M McConnell, Ioana Cozma, Quanbing Mou, John D Brennan, Yi Lu, Yingfu Li. Chem Soc Rev 2021
Times Cited: 27






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List of co-cited articles
135 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A DNA enzyme that cleaves RNA.
R R Breaker, G F Joyce. Chem Biol 1994
767
8
29

Optical Control of Metal Ion Probes in Cells and Zebrafish Using Highly Selective DNAzymes Conjugated to Upconversion Nanoparticles.
Zhenglin Yang, Kang Yong Loh, Yueh-Te Chu, Ruopei Feng, Nitya Sai Reddy Satyavolu, Mengyi Xiong, Stephanie M Nakamata Huynh, Kevin Hwang, Lele Li, Hang Xing,[...]. J Am Chem Soc 2018
106
8
29

DNAzymes as Activity-Based Sensors for Metal Ions: Recent Applications, Demonstrated Advantages, Current Challenges, and Future Directions.
Ryan J Lake, Zhenglin Yang, JingJing Zhang, Yi Lu. Acc Chem Res 2019
73
7
25

In vitro selection of a sodium-specific DNAzyme and its application in intracellular sensing.
Seyed-Fakhreddin Torabi, Peiwen Wu, Claire E McGhee, Lu Chen, Kevin Hwang, Nan Zheng, Jianjun Cheng, Yi Lu. Proc Natl Acad Sci U S A 2015
178
6
22

A DNAzyme-gold nanoparticle probe for uranyl ion in living cells.
Peiwen Wu, Kevin Hwang, Tian Lan, Yi Lu. J Am Chem Soc 2013
215
6
22

A Smart, Autocatalytic, DNAzyme Biocircuit for in Vivo, Amplified, MicroRNA Imaging.
Jie Wei, Huimin Wang, Qiong Wu, Xue Gong, Kang Ma, Xiaoqing Liu, Fuan Wang. Angew Chem Int Ed Engl 2020
56
6
22

DNAzyme-Mediated Assays for Amplified Detection of Nucleic Acids and Proteins.
Hanyong Peng, Ashley M Newbigging, Zhixin Wang, Jeffrey Tao, Wenchan Deng, X Chris Le, Hongquan Zhang. Anal Chem 2018
100
5
18

Metal Sensing by DNA.
Wenhu Zhou, Runjhun Saran, Juewen Liu. Chem Rev 2017
374
5
18

A DNAzyme-Based Colorimetric Paper Sensor for Helicobacter pylori.
M Monsur Ali, Michael Wolfe, Kha Tram, Jimmy Gu, Carlos D M Filipe, Yingfu Li, John D Brennan. Angew Chem Int Ed Engl 2019
55
5
18

DNAzyme-Mediated Genetically Encoded Sensors for Ratiometric Imaging of Metal Ions in Living Cells.
Mengyi Xiong, Zhenglin Yang, Ryan J Lake, Junjie Li, Shanni Hong, Huanhuan Fan, Xiao-Bing Zhang, Yi Lu. Angew Chem Int Ed Engl 2020
27
5
18

A microRNA-initiated DNAzyme motor operating in living cells.
Hanyong Peng, Xing-Fang Li, Hongquan Zhang, X Chris Le. Nat Commun 2017
253
5
18

Catalytic DNA: Scope, Applications, and Biochemistry of Deoxyribozymes.
Scott K Silverman. Trends Biochem Sci 2016
163
4
14

DNAzyme-based biosensors and nanodevices.
Liang Gong, Zilong Zhao, Yi-Fan Lv, Shuang-Yan Huan, Ting Fu, Xiao-Bing Zhang, Guo-Li Shen, Ru-Qin Yu. Chem Commun (Camb) 2015
157
4
14

Photocaged DNAzymes as a general method for sensing metal ions in living cells.
Kevin Hwang, Peiwen Wu, Taejin Kim, Lei Lei, Shiliang Tian, Yingxiao Wang, Yi Lu. Angew Chem Int Ed Engl 2014
98
4
14

Enzyme-Mediated Endogenous and Bioorthogonal Control of a DNAzyme Fluorescent Sensor for Imaging Metal Ions in Living Cells.
Yao Lin, Zhenglin Yang, Ryan J Lake, Chengbin Zheng, Yi Lu. Angew Chem Int Ed Engl 2019
32
4
14

Functional nucleic acid sensors.
Juewen Liu, Zehui Cao, Yi Lu. Chem Rev 2009
1299
4
14

A general purpose RNA-cleaving DNA enzyme.
S W Santoro, G F Joyce. Proc Natl Acad Sci U S A 1997
1046
4
14

PNA-Assisted DNAzymes to Cleave Double-Stranded DNA for Genetic Engineering with High Sequence Fidelity.
Mingkuan Lyu, Linggen Kong, Zhenglin Yang, Yuting Wu, Claire E McGhee, Yi Lu. J Am Chem Soc 2021
8
4
50

MNAzymes, a versatile new class of nucleic acid enzymes that can function as biosensors and molecular switches.
Elisa Mokany, Simon M Bone, Paul E Young, Tram B Doan, Alison V Todd. J Am Chem Soc 2010
137
4
14

In vitro selection of RNA molecules that bind specific ligands.
A D Ellington, J W Szostak. Nature 1990
5700
4
14

A biologically stable DNAzyme that efficiently silences gene expression in cells.
Yajun Wang, Kim Nguyen, Robert C Spitale, John C Chaput. Nat Chem 2021
31
4
14

Discovery and Biosensing Applications of Diverse RNA-Cleaving DNAzymes.
Meng Liu, Dingran Chang, Yingfu Li. Acc Chem Res 2017
117
4
14

Fundamental studies of functional nucleic acids: aptamers, riboswitches, ribozymes and DNAzymes.
Ronald Micura, Claudia Höbartner. Chem Soc Rev 2020
40
3
11

Catalytic Nucleic Acids: Biochemistry, Chemical Biology, Biosensors, and Nanotechnology.
Lingzi Ma, Juewen Liu. iScience 2020
56
3
11

In vitro selection and characterization of a highly efficient Zn(II)-dependent RNA-cleaving deoxyribozyme.
J Li, W Zheng, A H Kwon, Y Lu. Nucleic Acids Res 2000
316
3
11

Translating bacterial detection by DNAzymes into a litmus test.
Kha Tram, Pushpinder Kanda, Bruno J Salena, Shuangyan Huan, Yingfu Li. Angew Chem Int Ed Engl 2014
115
3
11

Selection and Characterization of an RNA-Cleaving DNAzyme Activated by Legionella pneumophila.
Meghan Rothenbroker, Erin M McConnell, Jimmy Gu, Malene L Urbanus, Sahar Esmaeili Samani, Alex W Ensminger, Carlos D M Filipe, Yingfu Li. Angew Chem Int Ed Engl 2021
11
3
27

Fluorogenic DNAzyme probes as bacterial indicators.
M Monsur Ali, Sergio D Aguirre, Hadeer Lazim, Yingfu Li. Angew Chem Int Ed Engl 2011
113
3
11

A Catalytic DNA Activated by a Specific Strain of Bacterial Pathogen.
Zhifa Shen, Zaisheng Wu, Dingran Chang, Wenqing Zhang, Kha Tram, Christine Lee, Peter Kim, Bruno J Salena, Yingfu Li. Angew Chem Int Ed Engl 2016
53
3
11

Photocaged functional nucleic acids for spatiotemporal imaging in biology.
Yuting Wu, Zhenglin Yang, Yi Lu. Curr Opin Chem Biol 2020
13
3
23

A catalytic beacon sensor for uranium with parts-per-trillion sensitivity and millionfold selectivity.
Juewen Liu, Andrea K Brown, Xiangli Meng, Donald M Cropek, Jonathan D Istok, David B Watson, Yi Lu. Proc Natl Acad Sci U S A 2007
296
3
11

Cell Surface Engineering Using DNAzymes: Metal Ion Mediated Control of Cell-Cell Interactions.
Ruo-Can Qian, Ze-Rui Zhou, Weijie Guo, Yuting Wu, Zhenglin Yang, Yi Lu. J Am Chem Soc 2021
22
3
13

Isothermal Amplification of Nucleic Acids.
Yongxi Zhao, Feng Chen, Qian Li, Lihua Wang, Chunhai Fan. Chem Rev 2015
672
3
11

Gold Nanoparticle Loaded Split-DNAzyme Probe for Amplified miRNA Detection in Living Cells.
Yanan Wu, Jin Huang, Xiaohai Yang, Yanjing Yang, Ke Quan, Nuli Xie, Jing Li, Changbei Ma, Kemin Wang. Anal Chem 2017
92
3
11

Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase.
C Tuerk, L Gold. Science 1990
6133
3
11

DNA-enhanced peroxidase activity of a DNA-aptamer-hemin complex.
P Travascio, Y Li, D Sen. Chem Biol 1998
599
3
11

Oriented Tetrahedron-Mediated Protection of Catalytic DNA Molecular-Scale Detector against in Vivo Degradation for Intracellular miRNA Detection.
Congcong Li, Chang Xue, Jue Wang, Mengxue Luo, Zhifa Shen, Zai-Sheng Wu. Anal Chem 2019
24
3
12

Orthogonal Activation of RNA-Cleaving DNAzymes in Live Cells by Reactive Oxygen Species.
Lu Xiao, Chunmei Gu, Yu Xiang. Angew Chem Int Ed Engl 2019
22
3
13

A DNA metalloenzyme with DNA ligase activity.
B Cuenoud, J W Szostak. Nature 1995
285
3
11

Imaging Endogenous Metal Ions in Living Cells Using a DNAzyme-Catalytic Hairpin Assembly Probe.
Zhenkun Wu, Huanhuan Fan, Nitya Sai Reddy Satyavolu, WenJing Wang, Ryan Lake, Jian-Hui Jiang, Yi Lu. Angew Chem Int Ed Engl 2017
103
3
11

Folding DNA to create nanoscale shapes and patterns.
Paul W K Rothemund. Nature 2006
3370
3
11

Fractal assembly of micrometre-scale DNA origami arrays with arbitrary patterns.
Grigory Tikhomirov, Philip Petersen, Lulu Qian. Nature 2017
171
3
11

An overview of microRNAs.
Scott M Hammond. Adv Drug Deliv Rev 2015
806
3
11

A proteinase-free DNA replication machinery for in vitro and in vivo amplified MicroRNA imaging.
Jie Wei, Huimin Wang, Xue Gong, Qing Wang, Hong Wang, Yangjie Zhou, Fuan Wang. Nucleic Acids Res 2020
22
3
13

Novel Fluorescence Switch for MicroRNA Imaging in Living Cells Based on DNAzyme Amplification Strategy.
Peixin Li, Min Wei, Fen Zhang, Juan Su, Wei Wei, Yuanjian Zhang, Songqin Liu. ACS Appl Mater Interfaces 2018
42
3
11

A New Na(+)-Dependent RNA-Cleaving DNAzyme with over 1000-fold Rate Acceleration by Ethanol.
Wenhu Zhou, Runjhun Saran, Qingyun Chen, Jinsong Ding, Juewen Liu. Chembiochem 2016
47
2
7

Metal ion sensors based on DNAzymes and related DNA molecules.
Xiao-Bing Zhang, Rong-Mei Kong, Yi Lu. Annu Rev Anal Chem (Palo Alto Calif) 2011
217
2
7

Ultrasensitive DNAzyme-Based Ca2+ Detection Boosted by Ethanol and a Solvent-Compatible Scaffold for Aptazyme Design.
Tianmeng Yu, Wenhu Zhou, Juewen Liu. Chembiochem 2018
16
2
12

A DNAzyme Feedback Amplification Strategy for Biosensing.
Meng Liu, Qiang Zhang, Dingran Chang, Jimmy Gu, John D Brennan, Yingfu Li. Angew Chem Int Ed Engl 2017
73
2
7

Freezing Directed Construction of Bio/Nano Interfaces: Reagentless Conjugation, Denser Spherical Nucleic Acids, and Better Nanoflares.
Biwu Liu, Juewen Liu. J Am Chem Soc 2017
130
2
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.

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