A citation-based method for searching scientific literature

Karthik Shekhar, Joshua R Sanes. Annu Rev Vis Sci 2021
Times Cited: 6







List of co-cited articles
25 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A cell atlas of the chick retina based on single-cell transcriptomics.
Masahito Yamagata, Wenjun Yan, Joshua R Sanes. Elife 2021
27
66


The functional diversity of retinal ganglion cells in the mouse.
Tom Baden, Philipp Berens, Katrin Franke, Miroslav Román Rosón, Matthias Bethge, Thomas Euler. Nature 2016
447
50

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics.
Karthik Shekhar, Sylvain W Lapan, Irene E Whitney, Nicholas M Tran, Evan Z Macosko, Monika Kowalczyk, Xian Adiconis, Joshua Z Levin, James Nemesh, Melissa Goldman,[...]. Cell 2016
540
50

Cell Atlas of The Human Fovea and Peripheral Retina.
Wenjun Yan, Yi-Rong Peng, Tavé van Zyl, Aviv Regev, Karthik Shekhar, Dejan Juric, Joshua R Sanes. Sci Rep 2020
60
33

Diverse Central Projection Patterns of Retinal Ganglion Cells.
Emily M Martersteck, Karla E Hirokawa, Mariah Evarts, Amy Bernard, Xin Duan, Yang Li, Lydia Ng, Seung W Oh, Benjamin Ouellette, Joshua J Royall,[...]. Cell Rep 2017
105
33

A scalable platform for the development of cell-type-specific viral drivers.
Sinisa Hrvatin, Christopher P Tzeng, M Aurel Nagy, Hume Stroud, Charalampia Koutsioumpa, Oren F Wilcox, Elena G Assad, Jonathan Green, Christopher D Harvey, Eric C Griffith,[...]. Elife 2019
35
33

Single-Cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification.
Brian S Clark, Genevieve L Stein-O'Brien, Fion Shiau, Gabrielle H Cannon, Emily Davis-Marcisak, Thomas Sherman, Clayton P Santiago, Thanh V Hoang, Fatemeh Rajaii, Rebecca E James-Esposito,[...]. Neuron 2019
157
33

From random to regular: Variation in the patterning of retinal mosaics.
Patrick W Keeley, Stephen J Eglen, Benjamin E Reese. J Comp Neurol 2020
19
33

Vertebrate neural cell-fate determination: lessons from the retina.
F J Livesey, C L Cepko. Nat Rev Neurosci 2001
709
33

Molecular Classification and Comparative Taxonomics of Foveal and Peripheral Cells in Primate Retina.
Yi-Rong Peng, Karthik Shekhar, Wenjun Yan, Dustin Herrmann, Anna Sappington, Gregory S Bryman, Tavé van Zyl, Michael Tri H Do, Aviv Regev, Joshua R Sanes. Cell 2019
167
33


Cell fate determination in the vertebrate retina.
Erin A Bassett, Valerie A Wallace. Trends Neurosci 2012
177
33

The neuronal organization of the retina.
Richard H Masland. Neuron 2012
486
33

A community-based transcriptomics classification and nomenclature of neocortical cell types.
Rafael Yuste, Michael Hawrylycz, Nadia Aalling, Argel Aguilar-Valles, Detlev Arendt, Ruben Armañanzas, Giorgio A Ascoli, Concha Bielza, Vahid Bokharaie, Tobias Borgtoft Bergmann,[...]. Nat Neurosci 2020
74
33

Establishing neuronal diversity in the spinal cord: a time and a place.
Andreas Sagner, James Briscoe. Development 2019
92
33

Digital Museum of Retinal Ganglion Cells with Dense Anatomy and Physiology.
J Alexander Bae, Shang Mu, Jinseop S Kim, Nicholas L Turner, Ignacio Tartavull, Nico Kemnitz, Chris S Jordan, Alex D Norton, William M Silversmith, Rachel Prentki,[...]. Cell 2018
85
33

Molecular logic of cellular diversification in the mouse cerebral cortex.
Daniela J Di Bella, Ehsan Habibi, Robert R Stickels, Gabriele Scalia, Juliana Brown, Payman Yadollahpour, Sung Min Yang, Catherine Abbate, Tommaso Biancalani, Evan Z Macosko,[...]. Nature 2021
43
33


Single-Cell Profiles of Retinal Ganglion Cells Differing in Resilience to Injury Reveal Neuroprotective Genes.
Nicholas M Tran, Karthik Shekhar, Irene E Whitney, Anne Jacobi, Inbal Benhar, Guosong Hong, Wenjun Yan, Xian Adiconis, McKinzie E Arnold, Jung Min Lee,[...]. Neuron 2019
164
33

The emergence of transcriptional identity in somatosensory neurons.
Nikhil Sharma, Kali Flaherty, Karina Lezgiyeva, Daniel E Wagner, Allon M Klein, David D Ginty. Nature 2020
114
33

Understanding the retinal basis of vision across species.
Tom Baden, Thomas Euler, Philipp Berens. Nat Rev Neurosci 2020
76
33


Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.
Evan Z Macosko, Anindita Basu, Rahul Satija, James Nemesh, Karthik Shekhar, Melissa Goldman, Itay Tirosh, Allison R Bialas, Nolan Kamitaki, Emily M Martersteck,[...]. Cell 2015
33

Diversification of multipotential postmitotic mouse retinal ganglion cell precursors into discrete types.
Karthik Shekhar, Irene E Whitney, Salwan Butrus, Yi-Rong Peng, Joshua R Sanes. Elife 2022
6
33

Genome engineering using the CRISPR-Cas9 system.
F Ann Ran, Patrick D Hsu, Jason Wright, Vineeta Agarwala, David A Scott, Feng Zhang. Nat Protoc 2013
16



Micro RNA-1298 opposes the effects of chronic oxidative stress on human trabecular meshwork cells via targeting on EIF4E3.
Wu Ruibin, Xiaowei Zheng, Jiaying Chen, Xinyi Zhang, Xiayin Yang, Yuxian Lin. Biomed Pharmacother 2018
8
16

An overview of microRNAs.
Scott M Hammond. Adv Drug Deliv Rev 2015
811
16


microRNA Profiling in Glaucoma Eyes With Varying Degrees of Optic Neuropathy by Using Next-Generation Sequencing.
Yaoming Liu, Yang Chen, Yayi Wang, Xinyu Zhang, Kai Gao, Shida Chen, Xiulan Zhang. Invest Ophthalmol Vis Sci 2018
28
16

Integration of eQTL and a Single-Cell Atlas in the Human Eye Identifies Causal Genes for Age-Related Macular Degeneration.
Luz D Orozco, Hsu-Hsin Chen, Christian Cox, Kenneth J Katschke, Rommel Arceo, Carmina Espiritu, Patrick Caplazi, Sarajane Saturnio Nghiem, Ying-Jiun Chen, Zora Modrusan,[...]. Cell Rep 2020
61
16

A Period of Controlled Elevation of IOP (CEI) Produces the Specific Gene Expression Responses and Focal Injury Pattern of Experimental Rat Glaucoma.
John C Morrison, William O Cepurna, Shandiz Tehrani, Tiffany E Choe, Hari Jayaram, Diana C Lozano, Brad Fortune, Elaine C Johnson. Invest Ophthalmol Vis Sci 2016
25
16


miRNAs and Genes Involved in the Interplay between Ocular Hypertension and Primary Open-Angle Glaucoma. Oxidative Stress, Inflammation, and Apoptosis Networks.
Jorge Raga-Cervera, Jose M Bolarin, Jose M Millan, Jose J Garcia-Medina, Laia Pedrola, Javier Abellán-Abenza, Mar Valero-Vello, Silvia M Sanz-González, José E O'Connor, David Galarreta-Mira,[...]. J Clin Med 2021
7
16

The pathophysiology and treatment of glaucoma: a review.
Robert N Weinreb, Tin Aung, Felipe A Medeiros. JAMA 2014
16

Role of microRNAs in the trabecular meshwork.
Pedro Gonzalez, Guorng Li, Jianming Qiu, Jing Wu, Coralia Luna. J Ocul Pharmacol Ther 2014
22
16

Targeting of integrin beta1 and kinesin 2alpha by microRNA 183.
Guorong Li, Coralia Luna, Jianming Qiu, David L Epstein, Pedro Gonzalez. J Biol Chem 2010
87
16

Single-cell transcriptomic atlas of the human retina identifies cell types associated with age-related macular degeneration.
Madhvi Menon, Shahin Mohammadi, Jose Davila-Velderrain, Brittany A Goods, Tanina D Cadwell, Yu Xing, Anat Stemmer-Rachamimov, Alex K Shalek, John Christopher Love, Manolis Kellis,[...]. Nat Commun 2019
103
16


MicroRNA detection by microarray.
Wei Li, Kangcheng Ruan. Anal Bioanal Chem 2009
226
16

MicroRNA-483-3p Inhibits Extracellular Matrix Production by Targeting Smad4 in Human Trabecular Meshwork Cells.
Wencui Shen, Yating Han, Bingqing Huang, Yan Qi, Linqi Xu, Ruru Guo, Xi Wang, Jiantao Wang. Invest Ophthalmol Vis Sci 2015
25
16

Long-term expression of miRNA for RNA interference using a novel vector system based on a negative-strand RNA virus.
Tomoyuki Honda, Yusuke Yamamoto, Takuji Daito, Yusuke Matsumoto, Akiko Makino, Keizo Tomonaga. Sci Rep 2016
20
16

A miRNA stabilizing polydopamine nano-platform for intraocular delivery of miR-21-5p in glaucoma therapy.
Chen Tan, Fan Jia, Peng Zhang, Xinghuai Sun, Yunsheng Qiao, Xueli Chen, Youxiang Wang, Junyi Chen, Yuan Lei. J Mater Chem B 2021
2
50

Differentially expressed microRNAs in the aqueous humor of patients with exfoliation glaucoma or primary open-angle glaucoma.
Michelle D Drewry, Pratap Challa, John G Kuchtey, Iris Navarro, Inas Helwa, Yanzhong Hu, Hongmei Mu, W Daniel Stamer, Rachel W Kuchtey, Yutao Liu. Hum Mol Genet 2018
39
16


Extensive post-transcriptional regulation of microRNAs and its implications for cancer.
J Michael Thomson, Martin Newman, Joel S Parker, Elizabeth M Morin-Kensicki, Tricia Wright, Scott M Hammond. Genes Dev 2006
682
16

Cross-talk between miR-29 and transforming growth factor-betas in trabecular meshwork cells.
Coralia Luna, Guorong Li, Jianming Qiu, David L Epstein, Pedro Gonzalez. Invest Ophthalmol Vis Sci 2011
71
16

The ocular pulse decreases aqueous humor outflow resistance by stimulating nitric oxide production.
Michael Madekurozwa, W Daniel Stamer, Ester Reina-Torres, Joseph M Sherwood, Darryl R Overby. Am J Physiol Cell Physiol 2021
7
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.