A citation-based method for searching scientific literature

Caroline Brossas, Bénédicte Duriez, Anne-Laure Valton, Marie-Noëlle Prioleau. Bioessays 2021
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Genome-wide mapping of human DNA replication by optical replication mapping supports a stochastic model of eukaryotic replication.
Weitao Wang, Kyle N Klein, Karel Proesmans, Hongbo Yang, Claire Marchal, Xiaopeng Zhu, Tyler Borrman, Alex Hastie, Zhiping Weng, John Bechhoefer,[...]. Mol Cell 2021
23
100

Topologically associating domains are stable units of replication-timing regulation.
Benjamin D Pope, Tyrone Ryba, Vishnu Dileep, Feng Yue, Weisheng Wu, Olgert Denas, Daniel L Vera, Yanli Wang, R Scott Hansen, Theresa K Canfield,[...]. Nature 2014
490
100

Control of DNA replication timing in the 3D genome.
Claire Marchal, Jiao Sima, David M Gilbert. Nat Rev Mol Cell Biol 2019
76
100

DNA Replication Timing Enters the Single-Cell Era.
Ichiro Hiratani, Saori Takahashi. Genes (Basel) 2019
8
100

RT States: systematic annotation of the human genome using cell type-specific replication timing programs.
Axel Poulet, Ben Li, Tristan Dubos, Juan Carlos Rivera-Mulia, David M Gilbert, Zhaohui S Qin. Bioinformatics 2019
3
100

Genomic methods for measuring DNA replication dynamics.
Michelle L Hulke, Dashiell J Massey, Amnon Koren. Chromosome Res 2020
13
100


Optimizing sparse sequencing of single cells for highly multiplex copy number profiling.
Timour Baslan, Jude Kendall, Brian Ward, Hilary Cox, Anthony Leotta, Linda Rodgers, Michael Riggs, Sean D'Italia, Guoli Sun, Mao Yong,[...]. Genome Res 2015
85
100

Mammalian DNA Replication Timing.
Athanasios E Vouzas, David M Gilbert. Cold Spring Harb Perspect Biol 2021
9
100



Replication timing and nuclear structure.
Haiqing Fu, Adrian Baris, Mirit I Aladjem. Curr Opin Cell Biol 2018
16
100


Nuclear organisation and replication timing are coupled through RIF1-PP1 interaction.
Stefano Gnan, Ilya M Flyamer, Kyle N Klein, Eleonora Castelli, Alexander Rapp, Andreas Maiser, Naiming Chen, Patrick Weber, Elin Enervald, M Cristina Cardoso,[...]. Nat Commun 2021
11
100

Replication timing alterations in leukemia affect clinically relevant chromosome domains.
Juan Carlos Rivera-Mulia, Takayo Sasaki, Claudia Trevilla-Garcia, Naoto Nakamichi, David J H F Knapp, Colin A Hammond, Bill H Chang, Jeffrey W Tyner, Meenakshi Devidas, Jared Zimmerman,[...]. Blood Adv 2019
5
100

Mapping replication timing domains genome wide in single mammalian cells with single-cell DNA replication sequencing.
Hisashi Miura, Saori Takahashi, Takahiro Shibata, Koji Nagao, Chikashi Obuse, Katsuzumi Okumura, Masato Ogata, Ichiro Hiratani, Shin-Ichiro Takebayashi. Nat Protoc 2020
7
100

Computational correction of index switching in multiplexed sequencing libraries.
Anton J M Larsson, Geoff Stanley, Rahul Sinha, Irving L Weissman, Rickard Sandberg. Nat Methods 2018
38
100

Genome-wide stability of the DNA replication program in single mammalian cells.
Saori Takahashi, Hisashi Miura, Takahiro Shibata, Koji Nagao, Katsuzumi Okumura, Masato Ogata, Chikashi Obuse, Shin-Ichiro Takebayashi, Ichiro Hiratani. Nat Genet 2019
34
100

Single-cell DNA replication profiling identifies spatiotemporal developmental dynamics of chromosome organization.
Hisashi Miura, Saori Takahashi, Rawin Poonperm, Akie Tanigawa, Shin-Ichiro Takebayashi, Ichiro Hiratani. Nat Genet 2019
29
100

Genome-wide copy number analysis of single cells.
Timour Baslan, Jude Kendall, Linda Rodgers, Hilary Cox, Mike Riggs, Asya Stepansky, Jennifer Troge, Kandasamy Ravi, Diane Esposito, B Lakshmi,[...]. Nat Protoc 2012
220
100



Large-Scale Chromatin Structure-Function Relationships during the Cell Cycle and Development: Insights from Replication Timing.
Vishnu Dileep, Juan Carlos Rivera-Mulia, Jiao Sima, David M Gilbert. Cold Spring Harb Symp Quant Biol 2015
42
100

Global reorganization of replication domains during embryonic stem cell differentiation.
Ichiro Hiratani, Tyrone Ryba, Mari Itoh, Tomoki Yokochi, Michaela Schwaiger, Chia-Wei Chang, Yung Lyou, Tim M Townes, Dirk Schübeler, David M Gilbert. PLoS Biol 2008
391
100

DNA replication timing alterations identify common markers between distinct progeroid diseases.
Juan Carlos Rivera-Mulia, Romain Desprat, Claudia Trevilla-Garcia, Daniela Cornacchia, Hélène Schwerer, Takayo Sasaki, Jiao Sima, Tyler Fells, Lorenz Studer, Jean-Marc Lemaitre,[...]. Proc Natl Acad Sci U S A 2017
20
100

G-quadruplex binding protein Rif1, a key regulator of replication timing.
Sana Alavi, Hamed Ghadiri, Bahareh Dabirmanesh, Kenji Moriyama, Khosro Khajeh, Hisao Masai. J Biochem 2021
9
100

Replication timing networks reveal a link between transcription regulatory circuits and replication timing control.
Juan Carlos Rivera-Mulia, Sebo Kim, Haitham Gabr, Abhijit Chakraborty, Ferhat Ay, Tamer Kahveci, David M Gilbert. Genome Res 2019
8
100

Replication Stress, Genomic Instability, and Replication Timing: A Complex Relationship.
Lina-Marie Briu, Chrystelle Maric, Jean-Charles Cadoret. Int J Mol Sci 2021
2
100

Interactive analysis and assessment of single-cell copy-number variations.
Tyler Garvin, Robert Aboukhalil, Jude Kendall, Timour Baslan, Gurinder S Atwal, James Hicks, Michael Wigler, Michael C Schatz. Nat Methods 2015
112
100

Replication timing maintains the global epigenetic state in human cells.
Kyle N Klein, Peiyao A Zhao, Xiaowen Lyu, Takayo Sasaki, Daniel A Bartlett, Amar M Singh, Ipek Tasan, Meng Zhang, Lotte P Watts, Shin-Ichiro Hiraga,[...]. Science 2021
28
100

DNA methylation is required to maintain both DNA replication timing precision and 3D genome organization integrity.
Qian Du, Grady C Smith, Phuc Loi Luu, James M Ferguson, Nicola J Armstrong, C Elizabeth Caldon, Elyssa M Campbell, Shalima S Nair, Elena Zotenko, Cathryn M Gould,[...]. Cell Rep 2021
4
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.