A citation-based method for searching scientific literature

Indhu-Shree Rajan-Babu, Junran J Peng, Readman Chiu, Chenkai Li, Arezoo Mohajeri, Egor Dolzhenko, Michael A Eberle, Inanc Birol, Jan M Friedman. Genome Med 2021
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions.
Egor Dolzhenko, Viraj Deshpande, Felix Schlesinger, Peter Krusche, Roman Petrovski, Sai Chen, Dorothea Emig-Agius, Andrew Gross, Giuseppe Narzisi, Brett Bowman,[...]. Bioinformatics 2019
42
50

An intronic VNTR affects splicing of ABCA7 and increases risk of Alzheimer's disease.
Arne De Roeck, Lena Duchateau, Jasper Van Dongen, Rita Cacace, Maria Bjerke, Tobi Van den Bossche, Patrick Cras, Rik Vandenberghe, Peter P De Deyn, Sebastiaan Engelborghs,[...]. Acta Neuropathol 2018
28
50

Paradoxical effects of repeat interruptions on spinocerebellar ataxia type 10 expansions and repeat instability.
Karen N McFarland, Jilin Liu, Ivette Landrian, Rui Gao, Partha S Sarkar, Salmo Raskin, Mariana Moscovich, Emilia M Gatto, Hélio A G Teive, Adriana Ochoa,[...]. Eur J Hum Genet 2013
24
50

Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes.
Kishwar Shafin, Trevor Pesout, Ryan Lorig-Roach, Marina Haukness, Hugh E Olsen, Colleen Bosworth, Joel Armstrong, Kristof Tigyi, Nicholas Maurer, Sergey Koren,[...]. Nat Biotechnol 2020
79
50


Glutaminase Deficiency Caused by Short Tandem Repeat Expansion in GLS.
André B P van Kuilenburg, Maja Tarailo-Graovac, Phillip A Richmond, Britt I Drögemöller, Mahmoud A Pouladi, René Leen, Koroboshka Brand-Arzamendi, Doreen Dobritzsch, Egor Dolzhenko, Michael A Eberle,[...]. N Engl J Med 2019
24
50

Long-read sequencing identifies the pathogenic nucleotide repeat expansion in RFC1 in a Japanese case of CANVAS.
Haruko Nakamura, Hiroshi Doi, Satomi Mitsuhashi, Satoko Miyatake, Kazutaka Katoh, Martin C Frith, Tetsuya Asano, Yosuke Kudo, Takuya Ikeda, Shun Kubota,[...]. J Hum Genet 2020
12
50

Interrogating the "unsequenceable" genomic trinucleotide repeat disorders by long-read sequencing.
Qian Liu, Peng Zhang, Depeng Wang, Weihong Gu, Kai Wang. Genome Med 2017
35
50



Expansion of intronic GGCCTG hexanucleotide repeat in NOP56 causes SCA36, a type of spinocerebellar ataxia accompanied by motor neuron involvement.
Hatasu Kobayashi, Koji Abe, Tohru Matsuura, Yoshio Ikeda, Toshiaki Hitomi, Yuji Akechi, Toshiyuki Habu, Wanyang Liu, Hiroko Okuda, Akio Koizumi. Am J Hum Genet 2011
166
50

Tandem-genotypes: robust detection of tandem repeat expansions from long DNA reads.
Satomi Mitsuhashi, Martin C Frith, Takeshi Mizuguchi, Satoko Miyatake, Tomoko Toyota, Hiroaki Adachi, Yoko Oma, Yoshihiro Kino, Hiroaki Mitsuhashi, Naomichi Matsumoto. Genome Biol 2019
35
50

Tissue differences in fragile X mosaics: mosaicism in blood cells may differ greatly from skin.
C S Dobkin, S L Nolin, I Cohen, V Sudhalter, M G Bialer, X H Ding, E C Jenkins, N Zhong, W T Brown. Am J Med Genet 1996
39
50

Performance of neural network basecalling tools for Oxford Nanopore sequencing.
Ryan R Wick, Louise M Judd, Kathryn E Holt. Genome Biol 2019
214
50

Long-read sequencing identifies GGC repeat expansions in NOTCH2NLC associated with neuronal intranuclear inclusion disease.
Jun Sone, Satomi Mitsuhashi, Atsushi Fujita, Takeshi Mizuguchi, Kohei Hamanaka, Keiko Mori, Haruki Koike, Akihiro Hashiguchi, Hiroshi Takashima, Hiroshi Sugiyama,[...]. Nat Genet 2019
119
50

Tandem repeat disorders.
Calen P Ryan. Evol Med Public Health 2019
1
100

Detecting Expansions of Tandem Repeats in Cohorts Sequenced with Short-Read Sequencing Data.
Rick M Tankard, Mark F Bennett, Peter Degorski, Martin B Delatycki, Paul J Lockhart, Melanie Bahlo. Am J Hum Genet 2018
35
50

Long-Read Sequencing Emerging in Medical Genetics.
Tuomo Mantere, Simone Kersten, Alexander Hoischen. Front Genet 2019
106
50

GC bias affects genomic and metagenomic reconstructions, underrepresenting GC-poor organisms.
Patrick Denis Browne, Tue Kjærgaard Nielsen, Witold Kot, Anni Aggerholm, M Thomas P Gilbert, Lara Puetz, Morten Rasmussen, Athanasios Zervas, Lars Hestbjerg Hansen. Gigascience 2020
24
50

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
50

Repeat expansion diseases.
Henry Paulson. Handb Clin Neurol 2018
112
50

Effect of AGG Interruptions on FMR1 Maternal Transmissions.
Olatz Villate, Nekane Ibarluzea, Hiart Maortua, Ana Belén de la Hoz, Laia Rodriguez-Revenga, Silvia Izquierdo-Álvarez, María Isabel Tejada. Front Mol Biosci 2020
4
50

Long-read human genome sequencing and its applications.
Glennis A Logsdon, Mitchell R Vollger, Evan E Eichler. Nat Rev Genet 2020
93
50

Detailed analysis of HTT repeat elements in human blood using targeted amplification-free long-read sequencing.
Ida Höijer, Yu-Chih Tsai, Tyson A Clark, Paul Kotturi, Niklas Dahl, Eva-Lena Stattin, Marie-Louise Bondeson, Lars Feuk, Ulf Gyllensten, Adam Ameur. Hum Mutat 2018
30
50


Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome.
Aaron M Wenger, Paul Peluso, William J Rowell, Pi-Chuan Chang, Richard J Hall, Gregory T Concepcion, Jana Ebler, Arkarachai Fungtammasan, Alexey Kolesnikov, Nathan D Olson,[...]. Nat Biotechnol 2019
269
50

Amplification-free long-read sequencing reveals unforeseen CRISPR-Cas9 off-target activity.
Ida Höijer, Josefin Johansson, Sanna Gudmundsson, Chen-Shan Chin, Ignas Bunikis, Susana Häggqvist, Anastasia Emmanouilidou, Maria Wilbe, Marcel den Hoed, Marie-Louise Bondeson,[...]. Genome Biol 2020
7
50

Alzheimer Disease Pathology-Associated Polymorphism in a Complex Variable Number of Tandem Repeat Region Within the MUC6 Gene, Near the AP2A2 Gene.
Yuriko Katsumata, David W Fardo, Adam D Bachstetter, Sergey C Artiushin, Wang-Xia Wang, Angela Wei, Lena J Brzezinski, Bela G Nelson, Qingwei Huang, Erin L Abner,[...]. J Neuropathol Exp Neurol 2020
9
50

Intronic ATTTC repeat expansions in STARD7 in familial adult myoclonic epilepsy linked to chromosome 2.
Mark A Corbett, Thessa Kroes, Liana Veneziano, Mark F Bennett, Rahel Florian, Amy L Schneider, Antonietta Coppola, Laura Licchetta, Silvana Franceschetti, Antonio Suppa,[...]. Nat Commun 2019
31
50

FMR1 CGG repeat expansion mutation detection and linked haplotype analysis for reliable and accurate preimplantation genetic diagnosis of fragile X syndrome.
Indhu-Shree Rajan-Babu, Mulias Lian, Felicia S H Cheah, Min Chen, Arnold S C Tan, Ethiraj B Prasath, Seong Feei Loh, Samuel S Chong. Expert Rev Mol Med 2017
6
50

Genome-wide detection of tandem DNA repeats that are expanded in autism.
Brett Trost, Worrawat Engchuan, Charlotte M Nguyen, Bhooma Thiruvahindrapuram, Egor Dolzhenko, Ian Backstrom, Mila Mirceta, Bahareh A Mojarad, Yue Yin, Alona Dov,[...]. Nature 2020
37
50

Anticipation in myotonic dystrophy: new light on an old problem.
P S Harper, H G Harley, W Reardon, D J Shaw. Am J Hum Genet 1992
235
50

Long-read sequencing for rare human genetic diseases.
Satomi Mitsuhashi, Naomichi Matsumoto. J Hum Genet 2020
27
50

Large-scale analysis of tandem repeat variability in the human genome.
Jorge Duitama, Alena Zablotskaya, Rita Gemayel, An Jansen, Stefanie Belet, Joris R Vermeesch, Kevin J Verstrepen, Guy Froyen. Nucleic Acids Res 2014
38
50

Haplotype threading: accurate polyploid phasing from long reads.
Sven D Schrinner, Rebecca Serra Mari, Jana Ebler, Mikko Rautiainen, Lancelot Seillier, Julia J Reimer, Björn Usadel, Tobias Marschall, Gunnar W Klau. Genome Biol 2020
12
50

Repeat Interruptions Modify Age at Onset in Myotonic Dystrophy Type 1 by Stabilizing DMPK Expansions in Somatic Cells.
Jovan Pešović, Stojan Perić, Miloš Brkušanin, Goran Brajušković, Vidosava Rakočević-Stojanović, Dušanka Savić-Pavićević. Front Genet 2018
16
50

PacBio But Not Illumina Technology Can Achieve Fast, Accurate and Complete Closure of the High GC, Complex Burkholderia pseudomallei Two-Chromosome Genome.
Jade L L Teng, Man Lung Yeung, Elaine Chan, Lilong Jia, Chi Ho Lin, Yi Huang, Herman Tse, Samson S Y Wong, Pak Chung Sham, Susanna K P Lau,[...]. Front Microbiol 2017
19
50

STRetch: detecting and discovering pathogenic short tandem repeat expansions.
Harriet Dashnow, Monkol Lek, Belinda Phipson, Andreas Halman, Simon Sadedin, Andrew Lonsdale, Mark Davis, Phillipa Lamont, Joshua S Clayton, Nigel G Laing,[...]. Genome Biol 2018
47
50

TTTCA repeat insertions in an intron of YEATS2 in benign adult familial myoclonic epilepsy type 4.
Patra Yeetong, Monnat Pongpanich, Chalurmpon Srichomthong, Adjima Assawapitaksakul, Varote Shotelersuk, Nithiphut Tantirukdham, Chaipat Chunharas, Kanya Suphapeetiporn, Vorasuk Shotelersuk. Brain 2019
31
50

NanoSim: nanopore sequence read simulator based on statistical characterization.
Chen Yang, Justin Chu, René L Warren, Inanç Birol. Gigascience 2017
53
50

Haplotype-aware diplotyping from noisy long reads.
Jana Ebler, Marina Haukness, Trevor Pesout, Tobias Marschall, Benedict Paten. Genome Biol 2019
18
50

Benchmarking of long-read correction methods.
Juliane C Dohm, Philipp Peters, Nancy Stralis-Pavese, Heinz Himmelbauer. NAR Genom Bioinform 2020
19
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.