A citation-based method for searching scientific literature

Ila A Marathe, Stella M Lai, Walter J Zahurancik, Michael G Poirier, Vicki H Wysocki, Venkat Gopalan. Nucleic Acids Res 2021
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription.
Rui Xiao, Jia-Yu Chen, Zhengyu Liang, Daji Luo, Geng Chen, Zhi John Lu, Yang Chen, Bing Zhou, Hairi Li, Xian Du,[...]. Cell 2019
80
100

5' processing of tRNA precursors can Be modulated by the human La antigen phosphoprotein.
H Fan, J L Goodier, J R Chamberlain, D R Engelke, R J Maraia. Mol Cell Biol 1998
96
100

RNase P: interface of the RNA and protein worlds.
Donald Evans, Steven M Marquez, Norman R Pace. Trends Biochem Sci 2006
151
100

Evidence for induced fit in bacterial RNase P RNA-mediated cleavage.
Mathias Brännvall, Ema Kikovska, Shiying Wu, Leif A Kirsebom. J Mol Biol 2007
30
100


Structural studies of RNase P.
Alfonso Mondragón. Annu Rev Biophys 2013
46
100

Fidelity of tRNA 5'-maturation: a possible basis for the functional dependence of archaeal and eukaryal RNase P on multiple protein cofactors.
Wen-Yi Chen, Deepali Singh, Lien B Lai, Michael A Stiffler, Hue D Lai, Mark P Foster, Venkat Gopalan. Nucleic Acids Res 2012
13
100

RNase P cleaves transient structures in some riboswitches.
Sidney Altman, Donna Wesolowski, Cecilia Guerrier-Takada, Yong Li. Proc Natl Acad Sci U S A 2005
65
100

Reconstitution of 30S ribosomal subunits in vitro using ribosome biogenesis factors.
Daichi Tamaru, Kazuaki Amikura, Yoshihiro Shimizu, Knud H Nierhaus, Takuya Ueda. RNA 2018
10
100

Dimeric and monomeric Bacillus subtilis RNase P holoenzyme in the absence and presence of pre-tRNA substrates.
Alessandra Barrera, Xingwang Fang, Jaby Jacob, Elizabeth Casey, P Thiyagarajan, Tao Pan. Biochemistry 2002
22
100

Use of chemical modification and mass spectrometry to identify substrate-contacting sites in proteinaceous RNase P, a tRNA processing enzyme.
Tien-Hao Chen, Akiko Tanimoto, Nikoloz Shkriabai, Mamuka Kvaratskhelia, Vicki Wysocki, Venkat Gopalan. Nucleic Acids Res 2016
12
100

The Role of Archaeal Chromatin in Transcription.
Travis J Sanders, Craig J Marshall, Thomas J Santangelo. J Mol Biol 2019
14
100

The spliceosome: design principles of a dynamic RNP machine.
Markus C Wahl, Cindy L Will, Reinhard Lührmann. Cell 2009
100

tRNA processing defects induce replication stress and Chk2-dependent disruption of piRNA transcription.
Anahi Molla-Herman, Ana Maria Vallés, Carine Ganem-Elbaz, Christophe Antoniewski, Jean-René Huynh. EMBO J 2015
37
100

Cooperative RNP assembly: complementary rescue of structural defects by protein and RNA subunits of archaeal RNase P.
Wen-Yi Chen, Yiren Xu, I-Ming Cho, Sri Vidya Oruganti, Mark P Foster, Venkat Gopalan. J Mol Biol 2011
10
100

RNase P RNAs from some Archaea are catalytically active.
J A Pannucci, E S Haas, T A Hall, J K Harris, J W Brown. Proc Natl Acad Sci U S A 1999
178
100

Cryo-EM Structure of the Human Ribonuclease P Holoenzyme.
Jian Wu, Shuangshuang Niu, Ming Tan, Chenhui Huang, Mingyue Li, Yang Song, Qianmin Wang, Juan Chen, Shaohua Shi, Pengfei Lan,[...]. Cell 2018
27
100

Heterodimerization of the human RNase P/MRP subunits Rpp20 and Rpp25 is a prerequisite for interaction with the P3 arm of RNase MRP RNA.
Katherine L D Hands-Taylor, Luigi Martino, Renée Tata, Jeffrey J Babon, Tam T Bui, Alex F Drake, Rebecca L Beavil, Ger J M Pruijn, Paul R Brown, Maria R Conte. Nucleic Acids Res 2010
29
100

Reconstitution of enzymatic activity from fragments of M1 RNA.
C Guerrier-Takada, S Altman. Proc Natl Acad Sci U S A 1992
54
100

RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme.
Johann Holzmann, Peter Frank, Esther Löffler, Keiryn L Bennett, Christopher Gerner, Walter Rossmanith. Cell 2008
370
100

Roles of RNase P and Its Subunits.
Nayef Jarrous. Trends Genet 2017
30
100

Alternative Protein Topology-Mediated Evolution of a Catalytic Ribonucleoprotein.
Lien B Lai, Hong-Duc Phan, Walter J Zahurancik, Venkat Gopalan. Trends Biochem Sci 2020
2
100


Functional reconstitution and characterization of Pyrococcus furiosus RNase P.
Hsin-Yue Tsai, Dileep K Pulukkunat, Walter K Woznick, Venkat Gopalan. Proc Natl Acad Sci U S A 2006
71
100

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
100

Precursors of tRNAs are stabilized by methylguanosine cap structures.
Takayuki Ohira, Tsutomu Suzuki. Nat Chem Biol 2016
31
100

Cryo-EM structure of catalytic ribonucleoprotein complex RNase MRP.
Anna Perederina, Di Li, Hyunwook Lee, Carol Bator, Igor Berezin, Susan L Hafenstein, Andrey S Krasilnikov. Nat Commun 2020
9
100

A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3.
Hideo Fukuhara, Mayumi Kifusa, Mitsutoshi Watanabe, Atsushi Terada, Takashi Honda, Tomoyuki Numata, Yoshimitsu Kakuta, Makoto Kimura. Biochem Biophys Res Commun 2006
50
100

A novel double kink-turn module in euryarchaeal RNase P RNAs.
Lien B Lai, Akiko Tanimoto, Stella M Lai, Wen-Yi Chen, Ila A Marathe, Eric Westhof, Vicki H Wysocki, Venkat Gopalan. Nucleic Acids Res 2017
16
100

Human RNase P ribonucleoprotein is required for formation of initiation complexes of RNA polymerase III.
Raphael Serruya, Natalie Orlovetskie, Robert Reiner, Yana Dehtiar-Zilber, Donna Wesolowski, Sidney Altman, Nayef Jarrous. Nucleic Acids Res 2015
18
100

The RNase P family.
J Christopher Ellis, James W Brown. RNA Biol 2009
43
100

RNase MRP cleaves pre-tRNASer-Met in the tRNA maturation pathway.
Yuichiro Saito, Jun Takeda, Kousuke Adachi, Yuko Nobe, Junya Kobayashi, Kouji Hirota, Douglas V Oliveira, Masato Taoka, Toshiaki Isobe. PLoS One 2014
7
100

Function and assembly of a chromatin-associated RNase P that is required for efficient transcription by RNA polymerase I.
Robert Reiner, Natalie Krasnov-Yoeli, Yana Dehtiar, Nayef Jarrous. PLoS One 2008
35
100

A view of RNase P.
Sidney Altman. Mol Biosyst 2007
62
100

Genome editing. The new frontier of genome engineering with CRISPR-Cas9.
Jennifer A Doudna, Emmanuelle Charpentier. Science 2014
100

Pentatricopeptide repeats of protein-only RNase P use a distinct mode to recognize conserved bases and structural elements of pre-tRNA.
Takamasa Teramoto, Kipchumba J Kaitany, Yoshimitsu Kakuta, Makoto Kimura, Carol A Fierke, Traci M Tanaka Hall. Nucleic Acids Res 2020
9
100





Retrieving functional pathways of biomolecules from single-particle snapshots.
Ali Dashti, Ghoncheh Mashayekhi, Mrinal Shekhar, Danya Ben Hail, Salah Salah, Peter Schwander, Amedee des Georges, Abhishek Singharoy, Joachim Frank, Abbas Ourmazd. Nat Commun 2020
19
100

In vitro reconstitution and analysis of eukaryotic RNase P RNPs.
Anna Perederina, Igor Berezin, Andrey S Krasilnikov. Nucleic Acids Res 2018
10
100

Minimal and RNA-free RNase P in Aquifex aeolicus.
Astrid I Nickel, Nadine B Wäber, Markus Gößringer, Marcus Lechner, Uwe Linne, Ursula Toth, Walter Rossmanith, Roland K Hartmann. Proc Natl Acad Sci U S A 2017
21
100

Inventory and analysis of the protein subunits of the ribonucleases P and MRP provides further evidence of homology between the yeast and human enzymes.
Magnus Alm Rosenblad, Marcela Dávila López, Paul Piccinelli, Tore Samuelsson. Nucleic Acids Res 2006
55
100

Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.
S Niranjanakumari, T Stams, S M Crary, D W Christianson, C A Fierke. Proc Natl Acad Sci U S A 1998
140
100

Both kinds of RNase P in all domains of life: surprises galore.
Charles J Daniels, Lien B Lai, Tien-Hao Chen, Venkat Gopalan. RNA 2019
8
100

Cryo-electron microscopy structure of an archaeal ribonuclease P holoenzyme.
Futang Wan, Qianmin Wang, Jing Tan, Ming Tan, Juan Chen, Shaohua Shi, Pengfei Lan, Jian Wu, Ming Lei. Nat Commun 2019
15
100


Computationally reconstructing cotranscriptional RNA folding from experimental data reveals rearrangement of non-native folding intermediates.
Angela M Yu, Paul M Gasper, Luyi Cheng, Lien B Lai, Simi Kaur, Venkat Gopalan, Alan A Chen, Julius B Lucks. Mol Cell 2021
6
100

Structural insight into precursor ribosomal RNA processing by ribonuclease MRP.
Pengfei Lan, Bin Zhou, Ming Tan, Shaobai Li, Mi Cao, Jian Wu, Ming Lei. Science 2020
8
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.