A citation-based method for searching scientific literature


List of co-cited articles
25 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Classifying the Binding Modes of Disordered Proteins.
Monika Fuxreiter. Int J Mol Sci 2020
22
60

Fuzziness enables context dependence of protein interactions.
Marton Miskei, Andrea Gregus, Rashmi Sharma, Norbert Duro, Fruzsina Zsolyomi, Monika Fuxreiter. FEBS Lett 2017
42
60

Biomolecular condensates: organizers of cellular biochemistry.
Salman F Banani, Hyun O Lee, Anthony A Hyman, Michael K Rosen. Nat Rev Mol Cell Biol 2017
60

Sequence-Based Prediction of Fuzzy Protein Interactions.
Marton Miskei, Attila Horvath, Michele Vendruscolo, Monika Fuxreiter. J Mol Biol 2020
44
60

FuzDB: a new phase in understanding fuzzy interactions.
Andras Hatos, Alexander Miguel Monzon, Silvio C E Tosatto, Damiano Piovesan, Monika Fuxreiter. Nucleic Acids Res 2022
7
60

Fuzziness and Frustration in the Energy Landscape of Protein Folding, Function, and Assembly.
Stefano Gianni, María Inés Freiberger, Per Jemth, Diego U Ferreiro, Peter G Wolynes, Monika Fuxreiter. Acc Chem Res 2021
30
60



PhaSepDB: a database of liquid-liquid phase separation related proteins.
Kaiqiang You, Qi Huang, Chunyu Yu, Boyan Shen, Cristoffer Sevilla, Minglei Shi, Henning Hermjakob, Yang Chen, Tingting Li. Nucleic Acids Res 2020
64
40

Sequence-based prediction of protein binding mode landscapes.
Attila Horvath, Marton Miskei, Viktor Ambrus, Michele Vendruscolo, Monika Fuxreiter. PLoS Comput Biol 2020
17
40

PhaSePro: the database of proteins driving liquid-liquid phase separation.
Bálint Mészáros, Gábor Erdős, Beáta Szabó, Éva Schád, Ágnes Tantos, Rawan Abukhairan, Tamás Horváth, Nikoletta Murvai, Orsolya P Kovács, Márton Kovács,[...]. Nucleic Acids Res 2020
55
40


DisProt: intrinsic protein disorder annotation in 2020.
András Hatos, Borbála Hajdu-Soltész, Alexander M Monzon, Nicolas Palopoli, Lucía Álvarez, Burcu Aykac-Fas, Claudio Bassot, Guillermo I Benítez, Martina Bevilacqua, Anastasia Chasapi,[...]. Nucleic Acids Res 2020
107
40


Protein Phase Separation: A New Phase in Cell Biology.
Steven Boeynaems, Simon Alberti, Nicolas L Fawzi, Tanja Mittag, Magdalini Polymenidou, Frederic Rousseau, Joost Schymkowitz, James Shorter, Benjamin Wolozin, Ludo Van Den Bosch,[...]. Trends Cell Biol 2018
769
40

Widespread occurrence of the droplet state of proteins in the human proteome.
Maarten Hardenberg, Attila Horvath, Viktor Ambrus, Monika Fuxreiter, Michele Vendruscolo. Proc Natl Acad Sci U S A 2020
51
40

Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures.
David Sehnal, Sebastian Bittrich, Mandar Deshpande, Radka Svobodová, Karel Berka, Václav Bazgier, Sameer Velankar, Stephen K Burley, Jaroslav Koča, Alexander S Rose. Nucleic Acids Res 2021
127
40


Transcription Factors Activate Genes through the Phase-Separation Capacity of Their Activation Domains.
Ann Boija, Isaac A Klein, Benjamin R Sabari, Alessandra Dall'Agnese, Eliot L Coffey, Alicia V Zamudio, Charles H Li, Krishna Shrinivas, John C Manteiga, Nancy M Hannett,[...]. Cell 2018
588
40

LLPSDB: a database of proteins undergoing liquid-liquid phase separation in vitro.
Qian Li, Xiaojun Peng, Yuanqing Li, Wenqin Tang, Jia'an Zhu, Jing Huang, Yifei Qi, Zhuqing Zhang. Nucleic Acids Res 2020
53
40

Pfam: The protein families database in 2021.
Jaina Mistry, Sara Chuguransky, Lowri Williams, Matloob Qureshi, Gustavo A Salazar, Erik L L Sonnhammer, Silvio C E Tosatto, Lisanna Paladin, Shriya Raj, Lorna J Richardson,[...]. Nucleic Acids Res 2021
661
40

Dual specificity kinase DYRK3 couples stress granule condensation/dissolution to mTORC1 signaling.
Frank Wippich, Bernd Bodenmiller, Maria Gustafsson Trajkovska, Stefanie Wanka, Ruedi Aebersold, Lucas Pelkmans. Cell 2013
344
40

Generic nature of the condensed states of proteins.
Monika Fuxreiter, Michele Vendruscolo. Nat Cell Biol 2021
25
40

PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins.
Tamas Lazar, Elizabeth Martínez-Pérez, Federica Quaglia, András Hatos, Lucía B Chemes, Javier A Iserte, Nicolás A Méndez, Nicolás A Garrone, Tadeo E Saldaño, Julia Marchetti,[...]. Nucleic Acids Res 2021
33
40

Liquid-liquid phase separation in biology.
Anthony A Hyman, Christoph A Weber, Frank Jülicher. Annu Rev Cell Dev Biol 2014
40

RNA contributions to the form and function of biomolecular condensates.
Christine Roden, Amy S Gladfelter. Nat Rev Mol Cell Biol 2021
113
20

Studying post-translational modifications with protein interaction networks.
Jonathan Woodsmith, Ulrich Stelzl. Curr Opin Struct Biol 2014
37
20

Editorial overview: Dynamic protein interactions - from complexes to molecular machines.
Monika Fuxreiter, Anna Panchenko. Curr Opin Struct Biol 2019
1
100

Exploring free-energy landscapes of intrinsically disordered proteins at atomic resolution using NMR spectroscopy.
Malene Ringkjøbing Jensen, Markus Zweckstetter, Jie-rong Huang, Martin Blackledge. Chem Rev 2014
176
20

Determination of protein structural ensembles using cryo-electron microscopy.
Massimiliano Bonomi, Michele Vendruscolo. Curr Opin Struct Biol 2019
30
20

Intrinsically disordered proteins: from sequence and conformational properties toward drug discovery.
Nasrollah Rezaei-Ghaleh, Martin Blackledge, Markus Zweckstetter. Chembiochem 2012
68
20

Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks.
Marija Buljan, Guilhem Chalancon, Sebastian Eustermann, Gunter P Wagner, Monika Fuxreiter, Alex Bateman, M Madan Babu. Mol Cell 2012
247
20

Folding of an intrinsically disordered protein by phosphorylation as a regulatory switch.
Alaji Bah, Robert M Vernon, Zeba Siddiqui, Mickaël Krzeminski, Ranjith Muhandiram, Charlie Zhao, Nahum Sonenberg, Lewis E Kay, Julie D Forman-Kay. Nature 2015
326
20

The RING 2.0 web server for high quality residue interaction networks.
Damiano Piovesan, Giovanni Minervini, Silvio C E Tosatto. Nucleic Acids Res 2016
218
20

Conformational propensities of intrinsically disordered proteins from NMR chemical shifts.
Jaka Kragelj, Valéry Ozenne, Martin Blackledge, Malene Ringkjøbing Jensen. Chemphyschem 2013
53
20

Experimental Characterization of Fuzzy Protein Assemblies: Interactions of Paramyxoviral NTAIL Domains With Their Functional Partners.
Francesca Troilo, Christophe Bignon, Stefano Gianni, Monika Fuxreiter, Sonia Longhi. Methods Enzymol 2018
6
20


Patterns of Dynamics Comprise a Conserved Evolutionary Trait.
F Zsolyomi, V Ambrus, M Fuxreiter. J Mol Biol 2020
7
20

Fold or not to fold upon binding - does it really matter?
Monika Fuxreiter. Curr Opin Struct Biol 2019
54
20

Residue-by-Residue View of In Vitro FUS Granules that Bind the C-Terminal Domain of RNA Polymerase II.
Kathleen A Burke, Abigail M Janke, Christy L Rhine, Nicolas L Fawzi. Mol Cell 2015
430
20




Fuzziness: linking regulation to protein dynamics.
Monika Fuxreiter. Mol Biosyst 2012
124
20

ELM-the eukaryotic linear motif resource in 2020.
Manjeet Kumar, Marc Gouw, Sushama Michael, Hugo Sámano-Sánchez, Rita Pancsa, Juliana Glavina, Athina Diakogianni, Jesús Alvarado Valverde, Dayana Bukirova, Jelena Čalyševa,[...]. Nucleic Acids Res 2020
127
20

BioMagResBank.
Eldon L Ulrich, Hideo Akutsu, Jurgen F Doreleijers, Yoko Harano, Yannis E Ioannidis, Jundong Lin, Miron Livny, Steve Mading, Dimitri Maziuk, Zachary Miller,[...]. Nucleic Acids Res 2008
20

Direct observation of structure and dynamics during phase separation of an elastomeric protein.
Sean E Reichheld, Lisa D Muiznieks, Fred W Keeley, Simon Sharpe. Proc Natl Acad Sci U S A 2017
111
20

The Protein Data Bank.
H M Berman, J Westbrook, Z Feng, G Gilliland, T N Bhat, H Weissig, I N Shindyalov, P E Bourne. Nucleic Acids Res 2000
20

Structural basis of GSK-3 inhibition by N-terminal phosphorylation and by the Wnt receptor LRP6.
Jennifer L Stamos, Matthew Ling-Hon Chu, Michael D Enos, Niket Shah, William I Weis. Elife 2014
95
20

Loss of Dynamic RNA Interaction and Aberrant Phase Separation Induced by Two Distinct Types of ALS/FTD-Linked FUS Mutations.
Amirhossein Ghanbari Niaki, Jaya Sarkar, Xinyi Cai, Kevin Rhine, Velinda Vidaurre, Brian Guy, Miranda Hurst, Jong Chan Lee, Hye Ran Koh, Lin Guo,[...]. Mol Cell 2020
63
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.