A citation-based method for searching scientific literature

Joshua D Crapser, Miguel A Arreola, Kate I Tsourmas, Kim N Green. Cell Mol Immunol 2021
Times Cited: 16







List of co-cited articles
96 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Microglia facilitate loss of perineuronal nets in the Alzheimer's disease brain.
Joshua D Crapser, Elizabeth E Spangenberg, Rocio A Barahona, Miguel A Arreola, Lindsay A Hohsfield, Kim N Green. EBioMedicine 2020
54
43

Microglial depletion prevents extracellular matrix changes and striatal volume reduction in a model of Huntington's disease.
Joshua D Crapser, Joseph Ochaba, Neelakshi Soni, Jack C Reidling, Leslie M Thompson, Kim N Green. Brain 2020
48
31

Microglia Depletion-Induced Remodeling of Extracellular Matrix and Excitatory Synapses in the Hippocampus of Adult Mice.
Luisa Strackeljan, Ewa Baczynska, Carla Cangalaya, David Baidoe-Ansah, Jakub Wlodarczyk, Rahul Kaushik, Alexander Dityatev. Cells 2021
10
50

Microglial regional heterogeneity and its role in the brain.
Yun-Long Tan, Yi Yuan, Li Tian. Mol Psychiatry 2020
159
25

Perineuronal nets protect fast-spiking interneurons against oxidative stress.
Jan-Harry Cabungcal, Pascal Steullet, Hirofumi Morishita, Rudolf Kraftsik, Michel Cuenod, Takao K Hensch, Kim Q Do. Proc Natl Acad Sci U S A 2013
309
25

Reactivation of ocular dominance plasticity in the adult visual cortex.
Tommaso Pizzorusso, Paolo Medini, Nicoletta Berardi, Sabrina Chierzi, James W Fawcett, Lamberto Maffei. Science 2002
25

Microglia sculpt postnatal neural circuits in an activity and complement-dependent manner.
Dorothy P Schafer, Emily K Lehrman, Amanda G Kautzman, Ryuta Koyama, Alan R Mardinly, Ryo Yamasaki, Richard M Ransohoff, Michael E Greenberg, Ben A Barres, Beth Stevens. Neuron 2012
25

limma powers differential expression analyses for RNA-sequencing and microarray studies.
Matthew E Ritchie, Belinda Phipson, Di Wu, Yifang Hu, Charity W Law, Wei Shi, Gordon K Smyth. Nucleic Acids Res 2015
18

Microglia Elimination Increases Neural Circuit Connectivity and Activity in Adult Mouse Cortex.
Yong-Jun Liu, Elizabeth E Spangenberg, Bryan Tang, Todd C Holmes, Kim N Green, Xiangmin Xu. J Neurosci 2021
39
18

Sustained microglial depletion with CSF1R inhibitor impairs parenchymal plaque development in an Alzheimer's disease model.
Elizabeth Spangenberg, Paul L Severson, Lindsay A Hohsfield, Joshua Crapser, Jiazhong Zhang, Elizabeth A Burton, Ying Zhang, Wayne Spevak, Jack Lin, Nicole Y Phan,[...]. Nat Commun 2019
265
18

Perineuronal net formation and structure in aggrecan knockout mice.
K A Giamanco, M Morawski, R T Matthews. Neuroscience 2010
138
18

Synaptic pruning by microglia is necessary for normal brain development.
Rosa C Paolicelli, Giulia Bolasco, Francesca Pagani, Laura Maggi, Maria Scianni, Patrizia Panzanelli, Maurizio Giustetto, Tiago Alves Ferreira, Eva Guiducci, Laura Dumas,[...]. Science 2011
18

The Perineuronal 'Safety' Net? Perineuronal Net Abnormalities in Neurological Disorders.
Teresa H Wen, Devin K Binder, Iryna M Ethell, Khaleel A Razak. Front Mol Neurosci 2018
75
18


Perineuronal nets: past and present.
M R Celio, R Spreafico, S De Biasi, L Vitellaro-Zuccarello. Trends Neurosci 1998
367
18

Microglia remodel synapses by presynaptic trogocytosis and spine head filopodia induction.
Laetitia Weinhard, Giulia di Bartolomei, Giulia Bolasco, Pedro Machado, Nicole L Schieber, Urte Neniskyte, Melanie Exiga, Auguste Vadisiute, Angelo Raggioli, Andreas Schertel,[...]. Nat Commun 2018
380
18

Reactive astrocyte nomenclature, definitions, and future directions.
Carole Escartin, Elena Galea, András Lakatos, James P O'Callaghan, Gabor C Petzold, Alberto Serrano-Pozo, Christian Steinhäuser, Andrea Volterra, Giorgio Carmignoto, Amit Agarwal,[...]. Nat Neurosci 2021
452
18

Microglial Remodeling of the Extracellular Matrix Promotes Synapse Plasticity.
Phi T Nguyen, Leah C Dorman, Simon Pan, Ilia D Vainchtein, Rafael T Han, Hiromi Nakao-Inoue, Sunrae E Taloma, Jerika J Barron, Ari B Molofsky, Mazen A Kheirbek,[...]. Cell 2020
168
18

Neurotoxic reactive astrocytes are induced by activated microglia.
Shane A Liddelow, Kevin A Guttenplan, Laura E Clarke, Frederick C Bennett, Christopher J Bohlen, Lucas Schirmer, Mariko L Bennett, Alexandra E Münch, Won-Suk Chung, Todd C Peterson,[...]. Nature 2017
18

Fate mapping analysis reveals that adult microglia derive from primitive macrophages.
Florent Ginhoux, Melanie Greter, Marylene Leboeuf, Sayan Nandi, Peter See, Solen Gokhan, Mark F Mehler, Simon J Conway, Lai Guan Ng, E Richard Stanley,[...]. Science 2010
12

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
12

Microglia emerge from erythromyeloid precursors via Pu.1- and Irf8-dependent pathways.
Katrin Kierdorf, Daniel Erny, Tobias Goldmann, Victor Sander, Christian Schulz, Elisa Gomez Perdiguero, Peter Wieghofer, Annette Heinrich, Pia Riemke, Christoph Hölscher,[...]. Nat Neurosci 2013
860
12

White matter aging drives microglial diversity.
Shima Safaiyan, Simon Besson-Girard, Tuğberk Kaya, Ludovico Cantuti-Castelvetri, Lu Liu, Hao Ji, Martina Schifferer, Garyfallia Gouna, Fumere Usifo, Nirmal Kannaiyan,[...]. Neuron 2021
76
12

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
12

Diverse Requirements for Microglial Survival, Specification, and Function Revealed by Defined-Medium Cultures.
Christopher J Bohlen, F Chris Bennett, Andrew F Tucker, Hannah Y Collins, Sara B Mulinyawe, Ben A Barres. Neuron 2017
310
12

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
12

Subventricular zone/white matter microglia reconstitute the empty adult microglial niche in a dynamic wave.
Lindsay A Hohsfield, Allison R Najafi, Yasamine Ghorbanian, Neelakshi Soni, Joshua Crapser, Dario X Figueroa Velez, Shan Jiang, Sarah E Royer, Sung Jin Kim, Caden M Henningfield,[...]. Elife 2021
12
16

Genetic Cell Ablation Reveals Clusters of Local Self-Renewing Microglia in the Mammalian Central Nervous System.
Julia Bruttger, Khalad Karram, Simone Wörtge, Tommy Regen, Federico Marini, Nicola Hoppmann, Matthias Klein, Thomas Blank, Simon Yona, Yochai Wolf,[...]. Immunity 2015
378
12

Homeostasis of Microglia in the Adult Brain: Review of Novel Microglia Depletion Systems.
Ari Waisman, Florent Ginhoux, Melanie Greter, Julia Bruttger. Trends Immunol 2015
119
12

Microglial signatures and their role in health and disease.
Oleg Butovsky, Howard L Weiner. Nat Rev Neurosci 2018
322
12

New tools for studying microglia in the mouse and human CNS.
Mariko L Bennett, F Chris Bennett, Shane A Liddelow, Bahareh Ajami, Jennifer L Zamanian, Nathaniel B Fernhoff, Sara B Mulinyawe, Christopher J Bohlen, Aykezar Adil, Andrew Tucker,[...]. Proc Natl Acad Sci U S A 2016
978
12

Zebrafish macrophage developmental arrest underlies depletion of microglia and reveals Csf1r-independent metaphocytes.
Laura E Kuil, Nynke Oosterhof, Giuliano Ferrero, Tereza Mikulášová, Martina Hason, Jordy Dekker, Mireia Rovira, Herma C van der Linde, Paulina Mh van Strien, Emma de Pater,[...]. Elife 2020
17
12

The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases.
Susanne Krasemann, Charlotte Madore, Ron Cialic, Caroline Baufeld, Narghes Calcagno, Rachid El Fatimy, Lien Beckers, Elaine O'Loughlin, Yang Xu, Zain Fanek,[...]. Immunity 2017
12

Colony-stimulating factor 1 receptor signaling is necessary for microglia viability, unmasking a microglia progenitor cell in the adult brain.
Monica R P Elmore, Allison R Najafi, Maya A Koike, Nabil N Dagher, Elizabeth E Spangenberg, Rachel A Rice, Masashi Kitazawa, Bernice Matusow, Hoa Nguyen, Brian L West,[...]. Neuron 2014
978
12

A novel microglial subset plays a key role in myelinogenesis in developing brain.
Agnieszka Wlodarczyk, Inge R Holtman, Martin Krueger, Nir Yogev, Julia Bruttger, Reza Khorooshi, Anouk Benmamar-Badel, Jelkje J de Boer-Bergsma, Nellie A Martin, Khalad Karram,[...]. EMBO J 2017
240
12

Single-Cell RNA Sequencing of Microglia throughout the Mouse Lifespan and in the Injured Brain Reveals Complex Cell-State Changes.
Timothy R Hammond, Connor Dufort, Lasse Dissing-Olesen, Stefanie Giera, Adam Young, Alec Wysoker, Alec J Walker, Frederick Gergits, Michael Segel, James Nemesh,[...]. Immunity 2019
730
12

Developmental Heterogeneity of Microglia and Brain Myeloid Cells Revealed by Deep Single-Cell RNA Sequencing.
Qingyun Li, Zuolin Cheng, Lu Zhou, Spyros Darmanis, Norma F Neff, Jennifer Okamoto, Gunsagar Gulati, Mariko L Bennett, Lu O Sun, Laura E Clarke,[...]. Neuron 2019
382
12

Spatial and temporal heterogeneity of mouse and human microglia at single-cell resolution.
Takahiro Masuda, Roman Sankowski, Ori Staszewski, Chotima Böttcher, Lukas Amann, Sagar, Christian Scheiwe, Stefan Nessler, Patrik Kunz, Geert van Loo,[...]. Nature 2019
492
12

Protective Microglial Subset in Development, Aging, and Disease: Lessons From Transcriptomic Studies.
Anouk Benmamar-Badel, Trevor Owens, Agnieszka Wlodarczyk. Front Immunol 2020
35
12

Microglia contribute to normal myelinogenesis and to oligodendrocyte progenitor maintenance during adulthood.
Nora Hagemeyer, Klara-Maria Hanft, Maria-Anna Akriditou, Nicole Unger, Eun S Park, E Richard Stanley, Ori Staszewski, Leda Dimou, Marco Prinz. Acta Neuropathol 2017
264
12

Targeted disruption of the mouse colony-stimulating factor 1 receptor gene results in osteopetrosis, mononuclear phagocyte deficiency, increased primitive progenitor cell frequencies, and reproductive defects.
Xu-Ming Dai, Gregory R Ryan, Andrew J Hapel, Melissa G Dominguez, Robert G Russell, Sara Kapp, Vonetta Sylvestre, E Richard Stanley. Blood 2002
753
12

Microglial subtypes: diversity within the microglial community.
Vassilis Stratoulias, Jose Luis Venero, Marie-Ève Tremblay, Bertrand Joseph. EMBO J 2019
213
12

A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease.
Hadas Keren-Shaul, Amit Spinrad, Assaf Weiner, Orit Matcovitch-Natan, Raz Dvir-Szternfeld, Tyler K Ulland, Eyal David, Kuti Baruch, David Lara-Astaiso, Beata Toth,[...]. Cell 2017
12

Microglia in Physiology and Disease.
Susanne A Wolf, H W G M Boddeke, Helmut Kettenmann. Annu Rev Physiol 2017
678
12


Microglial interactions with synapses are modulated by visual experience.
Marie-Ève Tremblay, Rebecca L Lowery, Ania K Majewska. PLoS Biol 2010
929
12

Perineuronal Nets: Plasticity, Protection, and Therapeutic Potential.
Amy C Reichelt, Dominic J Hare, Timothy J Bussey, Lisa M Saksida. Trends Neurosci 2019
62
12

Diurnal changes in perineuronal nets and parvalbumin neurons in the rat medial prefrontal cortex.
John H Harkness, Angela E Gonzalez, Priyanka N Bushana, Emily T Jorgensen, Deborah M Hegarty, Ariel A Di Nardo, Alain Prochiantz, Jonathan P Wisor, Sue A Aicher, Travis E Brown,[...]. Brain Struct Funct 2021
10
20

Perineuronal nets protect long-term memory by limiting activity-dependent inhibition from parvalbumin interneurons.
Wei Shi, Xiangbo Wei, Xiaofei Wang, Shuwen Du, Weixuan Liu, Jian Song, Yun Wang. Proc Natl Acad Sci U S A 2019
30
12

Aggrecan Directs Extracellular Matrix-Mediated Neuronal Plasticity.
Daire Rowlands, Kristian K Lensjø, Tovy Dinh, Sujeong Yang, Melissa R Andrews, Torkel Hafting, Marianne Fyhn, James W Fawcett, Gunnar Dick. J Neurosci 2018
72
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.