A citation-based method for searching scientific literature

Caleb R Stoltzfus, Ramya Sivakumar, Leo Kunz, Brandy E Olin Pope, Elena Menietti, Dario Speziale, Roberto Adelfio, Marina Bacac, Sara Colombetti, Mario Perro, Michael Y Gerner. Front Immunol 2021
Times Cited: 5







List of co-cited articles
33 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Effector and stem-like memory cell fates are imprinted in distinct lymph node niches directed by CXCR3 ligands.
Brigette C Duckworth, Fanny Lafouresse, Verena C Wimmer, Benjamin J Broomfield, Lennard Dalit, Yannick O Alexandre, Amania A Sheikh, Raymond Z Qin, Carolina Alvarado, Lisa A Mielke,[...]. Nat Immunol 2021
31
60

An intra-tumoral niche maintains and differentiates stem-like CD8 T cells.
Caroline S Jansen, Nataliya Prokhnevska, Viraj A Master, Martin G Sanda, Jennifer W Carlisle, Mehmet Asim Bilen, Maria Cardenas, Scott Wilkinson, Ross Lake, Adam G Sowalsky,[...]. Nature 2019
284
60

Defining CD8+ T cells that provide the proliferative burst after PD-1 therapy.
Se Jin Im, Masao Hashimoto, Michael Y Gerner, Junghwa Lee, Haydn T Kissick, Matheus C Burger, Qiang Shan, J Scott Hale, Judong Lee, Tahseen H Nasti,[...]. Nature 2016
900
40

The spatio-temporal control of effector T cell migration.
Deborah J Fowell, Minsoo Kim. Nat Rev Immunol 2021
29
40

Spatially organized multicellular immune hubs in human colorectal cancer.
Karin Pelka, Matan Hofree, Jonathan H Chen, Siranush Sarkizova, Joshua D Pirl, Vjola Jorgji, Alborz Bejnood, Danielle Dionne, William H Ge, Katherine H Xu,[...]. Cell 2021
47
40

CXCR6 positions cytotoxic T cells to receive critical survival signals in the tumor microenvironment.
Mauro Di Pilato, Raphael Kfuri-Rubens, Jasper N Pruessmann, Aleksandra J Ozga, Marius Messemaker, Bruno L Cadilha, Ramya Sivakumar, Chiara Cianciaruso, Ross D Warner, Francesco Marangoni,[...]. Cell 2021
50
40

CytoMAP: A Spatial Analysis Toolbox Reveals Features of Myeloid Cell Organization in Lymphoid Tissues.
Caleb R Stoltzfus, Jakub Filipek, Benjamin H Gern, Brandy E Olin, Joseph M Leal, Yajun Wu, Miranda R Lyons-Cohen, Jessica Y Huang, Clarissa L Paz-Stoltzfus, Courtney R Plumlee,[...]. Cell Rep 2020
62
40

CellProfiler Analyst: interactive data exploration, analysis and classification of large biological image sets.
David Dao, Adam N Fraser, Jane Hung, Vebjorn Ljosa, Shantanu Singh, Anne E Carpenter. Bioinformatics 2016
65
40

In Situ Classification of Cell Types in Human Kidney Tissue Using 3D Nuclear Staining.
Andre Woloshuk, Suraj Khochare, Aljohara F Almulhim, Andrew T McNutt, Dawson Dean, Daria Barwinska, Michael J Ferkowicz, Michael T Eadon, Katherine J Kelly, Kenneth W Dunn,[...]. Cytometry A 2021
6
40

DeepSynth: Three-dimensional nuclear segmentation of biological images using neural networks trained with synthetic data.
Kenneth W Dunn, Chichen Fu, David Joon Ho, Soonam Lee, Shuo Han, Paul Salama, Edward J Delp. Sci Rep 2019
29
40

Quantitative Three-Dimensional Tissue Cytometry to Study Kidney Tissue and Resident Immune Cells.
Seth Winfree, Shehnaz Khan, Radmila Micanovic, Michael T Eadon, Katherine J Kelly, Timothy A Sutton, Carrie L Phillips, Kenneth W Dunn, Tarek M El-Achkar. J Am Soc Nephrol 2017
31
40

A multimodal and integrated approach to interrogate human kidney biopsies with rigor and reproducibility: guidelines from the Kidney Precision Medicine Project.
Tarek M El-Achkar, Michael T Eadon, Rajasree Menon, Blue B Lake, Tara K Sigdel, Theodore Alexandrov, Samir Parikh, Guanshi Zhang, Dejan Dobi, Kenneth W Dunn,[...]. Physiol Genomics 2021
24
40

The single-cell pathology landscape of breast cancer.
Hartland W Jackson, Jana R Fischer, Vito R T Zanotelli, H Raza Ali, Robert Mechera, Savas D Soysal, Holger Moch, Simone Muenst, Zsuzsanna Varga, Walter P Weber,[...]. Nature 2020
287
40

Deep Profiling of Mouse Splenic Architecture with CODEX Multiplexed Imaging.
Yury Goltsev, Nikolay Samusik, Julia Kennedy-Darling, Salil Bhate, Matthew Hale, Gustavo Vazquez, Sarah Black, Garry P Nolan. Cell 2018
446
40

Tertiary lymphoid structures generate and propagate anti-tumor antibody-producing plasma cells in renal cell cancer.
Maxime Meylan, Florent Petitprez, Etienne Becht, Antoine Bougoüin, Guilhem Pupier, Anne Calvez, Ilenia Giglioli, Virginie Verkarre, Guillaume Lacroix, Johanna Verneau,[...]. Immunity 2022
35
40

Critical Role for CD103(+)/CD141(+) Dendritic Cells Bearing CCR7 for Tumor Antigen Trafficking and Priming of T Cell Immunity in Melanoma.
Edward W Roberts, Miranda L Broz, Mikhail Binnewies, Mark B Headley, Amanda E Nelson, Denise M Wolf, Tsuneyasu Kaisho, Dusan Bogunovic, Nina Bhardwaj, Matthew F Krummel. Cancer Cell 2016
480
40

Conventional type I dendritic cells maintain a reservoir of proliferative tumor-antigen specific TCF-1+ CD8+ T cells in tumor-draining lymph nodes.
Jason M Schenkel, Rebecca H Herbst, David Canner, Amy Li, Michelle Hillman, Sean-Luc Shanahan, Grace Gibbons, Olivia C Smith, Jonathan Y Kim, Peter Westcott,[...]. Immunity 2021
31
40

PD-L1 expression by dendritic cells is a key regulator of T-cell immunity in cancer.
Soyoung A Oh, Dai-Chen Wu, Jeanne Cheung, Armando Navarro, Huizhong Xiong, Rafael Cubas, Klara Totpal, Henry Chiu, Yan Wu, Laetitia Comps-Agrar,[...]. Nat Cancer 2020
73
40

Tertiary lymphoid structures improve immunotherapy and survival in melanoma.
Rita Cabrita, Martin Lauss, Adriana Sanna, Marco Donia, Mathilde Skaarup Larsen, Shamik Mitra, Iva Johansson, Bengt Phung, Katja Harbst, Johan Vallon-Christersson,[...]. Nature 2020
653
40

A reservoir of stem-like CD8+ T cells in the tumor-draining lymph node preserves the ongoing antitumor immune response.
Kelli A Connolly, Manik Kuchroo, Aarthi Venkat, Achia Khatun, Jiawei Wang, Ivana William, Noah I Hornick, Brittany L Fitzgerald, Martina Damo, Moujtaba Y Kasmani,[...]. Sci Immunol 2021
39
40

The TCF1-Bcl6 axis counteracts type I interferon to repress exhaustion and maintain T cell stemness.
Tuoqi Wu, Yun Ji, E Ashley Moseman, Haifeng C Xu, Monica Manglani, Martha Kirby, Stacie M Anderson, Robin Handon, Elizabeth Kenyon, Abdel Elkahloun,[...]. Sci Immunol 2016
250
40

T Cell Factor 1-Expressing Memory-like CD8(+) T Cells Sustain the Immune Response to Chronic Viral Infections.
Daniel T Utzschneider, Mélanie Charmoy, Vijaykumar Chennupati, Laurène Pousse, Daniela Pais Ferreira, Sandra Calderon-Copete, Maxime Danilo, Francesca Alfei, Maike Hofmann, Dominik Wieland,[...]. Immunity 2016
450
40

CD8+ T cell differentiation and dysfunction in cancer.
Mary Philip, Andrea Schietinger. Nat Rev Immunol 2022
77
40

Chemokines and the immune response to cancer.
Aleksandra J Ozga, Melvyn T Chow, Andrew D Luster. Immunity 2021
84
40

B cells are associated with survival and immunotherapy response in sarcoma.
Florent Petitprez, Aurélien de Reyniès, Emily Z Keung, Tom Wei-Wu Chen, Cheng-Ming Sun, Julien Calderaro, Yung-Ming Jeng, Li-Ping Hsiao, Laetitia Lacroix, Antoine Bougoüin,[...]. Nature 2020
671
40

B cells and tertiary lymphoid structures promote immunotherapy response.
Beth A Helmink, Sangeetha M Reddy, Jianjun Gao, Shaojun Zhang, Rafet Basar, Rohit Thakur, Keren Yizhak, Moshe Sade-Feldman, Jorge Blando, Guangchun Han,[...]. Nature 2020
797
40

Myeloid antigen-presenting cell niches sustain antitumor T cells and license PD-1 blockade via CD28 costimulation.
Jaikumar Duraiswamy, Riccardo Turrini, Aspram Minasyan, David Barras, Isaac Crespo, Alizée J Grimm, Julia Casado, Raphael Genolet, Fabrizio Benedetti, Alexandre Wicky,[...]. Cancer Cell 2021
19
40

Interpretation of T cell states from single-cell transcriptomics data using reference atlases.
Massimo Andreatta, Jesus Corria-Osorio, Sören Müller, Rafael Cubas, George Coukos, Santiago J Carmona. Nat Commun 2021
51
40

Tumor-Residing Batf3 Dendritic Cells Are Required for Effector T Cell Trafficking and Adoptive T Cell Therapy.
Stefani Spranger, Daisy Dai, Brendan Horton, Thomas F Gajewski. Cancer Cell 2017
684
40

Intratumoral Tcf1+PD-1+CD8+ T Cells with Stem-like Properties Promote Tumor Control in Response to Vaccination and Checkpoint Blockade Immunotherapy.
Imran Siddiqui, Karin Schaeuble, Vijaykumar Chennupati, Silvia A Fuertes Marraco, Sandra Calderon-Copete, Daniela Pais Ferreira, Santiago J Carmona, Leonardo Scarpellino, David Gfeller, Sylvain Pradervand,[...]. Immunity 2019
526
40

Clonal replacement of tumor-specific T cells following PD-1 blockade.
Kathryn E Yost, Ansuman T Satpathy, Daniel K Wells, Yanyan Qi, Chunlin Wang, Robin Kageyama, Katherine L McNamara, Jeffrey M Granja, Kavita Y Sarin, Ryanne A Brown,[...]. Nat Med 2019
538
40

Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma.
Moshe Sade-Feldman, Keren Yizhak, Stacey L Bjorgaard, John P Ray, Carl G de Boer, Russell W Jenkins, David J Lieb, Jonathan H Chen, Dennie T Frederick, Michal Barzily-Rokni,[...]. Cell 2018
683
40

The PD-1/PD-L1-Checkpoint Restrains T cell Immunity in Tumor-Draining Lymph Nodes.
Floris Dammeijer, Mandy van Gulijk, Evalyn E Mulder, Melanie Lukkes, Larissa Klaase, Thierry van den Bosch, Menno van Nimwegen, Sai Ping Lau, Kitty Latupeirissa, Sjoerd Schetters,[...]. Cancer Cell 2020
139
40

Sense and immuno-sensibility: innate lymphoid cell niches and circuits.
Adelle P McFarland, Marco Colonna. Curr Opin Immunol 2020
3
33



Neuronal regulation of type 2 innate lymphoid cells via neuromedin U.
Vânia Cardoso, Julie Chesné, Hélder Ribeiro, Bethania García-Cassani, Tânia Carvalho, Tiffany Bouchery, Kathleen Shah, Nuno L Barbosa-Morais, Nicola Harris, Henrique Veiga-Fernandes. Nature 2017
313
20

Microglia and Perivascular Macrophages Act as Antigen Presenting Cells to Promote CD8 T Cell Infiltration of the Brain.
Emma N Goddery, Cori E Fain, Chloe G Lipovsky, Katayoun Ayasoufi, Lila T Yokanovich, Courtney S Malo, Roman H Khadka, Zachariah P Tritz, Fang Jin, Michael J Hansen,[...]. Front Immunol 2021
8
20

Neuro-immune Interactions Drive Tissue Programming in Intestinal Macrophages.
Ilana Gabanyi, Paul A Muller, Linda Feighery, Thiago Y Oliveira, Frederico A Costa-Pinto, Daniel Mucida. Cell 2016
342
20



Chemokine guidance of central memory T cells is critical for antiviral recall responses in lymph nodes.
Jung Hwan Sung, Han Zhang, E Ashley Moseman, David Alvarez, Matteo Iannacone, Sarah E Henrickson, Juan C de la Torre, Joanna R Groom, Andrew D Luster, Ulrich H von Andrian. Cell 2012
156
20

The Chemoattractant Receptor Ebi2 Drives Intranodal Naive CD4+ T Cell Peripheralization to Promote Effective Adaptive Immunity.
Antonio P Baptista, Anita Gola, Yuefeng Huang, Pedro Milanez-Almeida, Parizad Torabi-Parizi, Joseph F Urban, Virginia S Shapiro, Michael Y Gerner, Ronald N Germain. Immunity 2019
51
20

Bacterial entry to the splenic white pulp initiates antigen presentation to CD8+ T cells.
Taiki Aoshi, Bernd H Zinselmeyer, Vjollca Konjufca, Jennifer N Lynch, Xin Zhang, Yukio Koide, Mark J Miller. Immunity 2008
98
20


Surface-bound chemokines capture and prime T cells for synapse formation.
Rachel S Friedman, Jordan Jacobelli, Matthew F Krummel. Nat Immunol 2006
125
20

Dynamic imaging of the effector immune response to listeria infection in vivo.
Janelle C Waite, Ingrid Leiner, Peter Lauer, Chris S Rae, Gaetan Barbet, Huan Zheng, Daniel A Portnoy, Eric G Pamer, Michael L Dustin. PLoS Pathog 2011
68
20

Anti-microbial Functions of Group 3 Innate Lymphoid Cells in Gut-Associated Lymphoid Tissues Are Regulated by G-Protein-Coupled Receptor 183.
Coco Chu, Saya Moriyama, Zhi Li, Lei Zhou, Anne-Laure Flamar, Christoph S N Klose, Jesper B Moeller, Gregory G Putzel, David R Withers, Gregory F Sonnenberg,[...]. Cell Rep 2018
48
20

Dendritic cells maintain anti-tumor immunity by positioning CD8 skin-resident memory T cells.
Jennifer L Vella, Aleksey Molodtsov, Christina V Angeles, Bruce R Branchini, Mary Jo Turk, Yina H Huang. Life Sci Alliance 2021
6
20

Anatomically restricted synergistic antiviral activities of innate and adaptive immune cells in the skin.
Heather D Hickman, Glennys V Reynoso, Barbara F Ngudiankama, Erica J Rubin, Javier G Magadán, Stephanie S Cush, James Gibbs, Barbara Molon, Vincenzo Bronte, Jack R Bennink,[...]. Cell Host Microbe 2013
51
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.