A citation-based method for searching scientific literature

Ilias Boltsis, Frank Grosveld, Guillaume Giraud, Petros Kolovos. Front Cell Dev Biol 2021
Times Cited: 5







List of co-cited articles
13 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The 4D nucleome project.
Job Dekker, Andrew S Belmont, Mitchell Guttman, Victor O Leshyk, John T Lis, Stavros Lomvardas, Leonid A Mirny, Clodagh C O'Shea, Peter J Park, Bing Ren,[...]. Nature 2017
284
40

A high-resolution map of the three-dimensional chromatin interactome in human cells.
Fulai Jin, Yan Li, Jesse R Dixon, Siddarth Selvaraj, Zhen Ye, Ah Young Lee, Chia-An Yen, Anthony D Schmitt, Celso A Espinoza, Bing Ren. Nature 2013
748
40

Disruptions of topological chromatin domains cause pathogenic rewiring of gene-enhancer interactions.
Darío G Lupiáñez, Katerina Kraft, Verena Heinrich, Peter Krawitz, Francesco Brancati, Eva Klopocki, Denise Horn, Hülya Kayserili, John M Opitz, Renata Laxova,[...]. Cell 2015
40

Regulatory Landscaping: How Enhancer-Promoter Communication Is Sculpted in 3D.
Michael I Robson, Alessa R Ringel, Stefan Mundlos. Mol Cell 2019
73
40

3D structures of individual mammalian genomes studied by single-cell Hi-C.
Tim J Stevens, David Lando, Srinjan Basu, Liam P Atkinson, Yang Cao, Steven F Lee, Martin Leeb, Kai J Wohlfahrt, Wayne Boucher, Aoife O'Shaughnessy-Kirwan,[...]. Nature 2017
413
40

Topological domains in mammalian genomes identified by analysis of chromatin interactions.
Jesse R Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li, Yin Shen, Ming Hu, Jun S Liu, Bing Ren. Nature 2012
40

Cell-cycle dynamics of chromosomal organization at single-cell resolution.
Takashi Nagano, Yaniv Lubling, Csilla Várnai, Carmel Dudley, Wing Leung, Yael Baran, Netta Mendelson Cohen, Steven Wingett, Peter Fraser, Amos Tanay. Nature 2017
342
40

CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function.
Ya Guo, Quan Xu, Daniele Canzio, Jia Shou, Jinhuan Li, David U Gorkin, Inkyung Jung, Haiyang Wu, Yanan Zhai, Yuanxiao Tang,[...]. Cell 2015
525
40

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
Suhas S P Rao, Miriam H Huntley, Neva C Durand, Elena K Stamenova, Ivan D Bochkov, James T Robinson, Adrian L Sanborn, Ido Machol, Arina D Omer, Eric S Lander,[...]. Cell 2014
40

Capturing chromosome conformation.
Job Dekker, Karsten Rippe, Martijn Dekker, Nancy Kleckner. Science 2002
40

Microscopy-Based Chromosome Conformation Capture Enables Simultaneous Visualization of Genome Organization and Transcription in Intact Organisms.
Andrés M Cardozo Gizzi, Diego I Cattoni, Jean-Bernard Fiche, Sergio M Espinola, Julian Gurgo, Olivier Messina, Christophe Houbron, Yuki Ogiyama, Giorgio L Papadopoulos, Giacomo Cavalli,[...]. Mol Cell 2019
95
40


Enhancer hubs and loop collisions identified from single-allele topologies.
Amin Allahyar, Carlo Vermeulen, Britta A M Bouwman, Peter H L Krijger, Marjon J A M Verstegen, Geert Geeven, Melissa van Kranenburg, Mark Pieterse, Roy Straver, Judith H I Haarhuis,[...]. Nat Genet 2018
105
40

Endothelial cell differentiation is encompassed by changes in long range interactions between inactive chromatin regions.
Henri Niskanen, Irina Tuszynska, Rafal Zaborowski, Merja Heinäniemi, Seppo Ylä-Herttuala, Bartek Wilczynski, Minna U Kaikkonen. Nucleic Acids Res 2018
28
20

A transcriptional switch governs fibroblast activation in heart disease.
Michael Alexanian, Pawel F Przytycki, Rudi Micheletti, Arun Padmanabhan, Lin Ye, Joshua G Travers, Barbara Gonzalez-Teran, Ana Catarina Silva, Qiming Duan, Sanjeev S Ranade,[...]. Nature 2021
25
20

Dissecting Chromatin Architecture for Novel Cardiovascular Disease Targets.
Roger Sik-Yin Foo, Chukwuemeka George Anene-Nzelu, Manuel Rosa-Garrido, Thomas M Vondriska. Circulation 2019
3
33

Epigenetic Modifications in Cardiovascular Aging and Diseases.
Weiqi Zhang, Moshi Song, Jing Qu, Guang-Hui Liu. Circ Res 2018
84
20

Single-cell measurement of higher-order 3D genome organization with scSPRITE.
Mary V Arrastia, Joanna W Jachowicz, Noah Ollikainen, Matthew S Curtis, Charlotte Lai, Sofia A Quinodoz, David A Selck, Rustem F Ismagilov, Mitchell Guttman. Nat Biotechnol 2022
10
20

Understanding the 3D genome: Emerging impacts on human disease.
Anton Krumm, Zhijun Duan. Semin Cell Dev Biol 2019
28
20

Genetic basis of cardiomyopathy and the genotypes involved in prognosis and left ventricular reverse remodeling.
Takashige Tobita, Seitaro Nomura, Takanori Fujita, Hiroyuki Morita, Yoshihiro Asano, Kenji Onoue, Masamichi Ito, Yasushi Imai, Atsushi Suzuki, Toshiyuki Ko,[...]. Sci Rep 2018
59
20

Three-dimensional chromatin organization in cardiac development and disease.
Alessandro Bertero, Manuel Rosa-Garrido. J Mol Cell Cardiol 2021
6
20

Atlas of the clinical genetics of human dilated cardiomyopathy.
Jan Haas, Karen S Frese, Barbara Peil, Wanda Kloos, Andreas Keller, Rouven Nietsch, Zhu Feng, Sabine Müller, Elham Kayvanpour, Britta Vogel,[...]. Eur Heart J 2015
323
20

Telomeres and telomerase: three decades of progress.
Jerry W Shay, Woodring E Wright. Nat Rev Genet 2019
257
20

Cell aging in vivo and in vitro.
H Rubin. Mech Ageing Dev 1997
158
20

Telomeres and telomerase in oncogenesis.
Tomasz Trybek, Artur Kowalik, Stanisław Góźdź, Aldona Kowalska. Oncol Lett 2020
23
20



SORBS2 transcription is activated by telomere position effect-over long distance upon telomere shortening in muscle cells from patients with facioscapulohumeral dystrophy.
Jérôme D Robin, Andrew T Ludlow, Kimberly Batten, Marie-Cécile Gaillard, Guido Stadler, Frédérique Magdinier, Woodring E Wright, Jerry W Shay. Genome Res 2015
52
20

Control of telomerase action at human telomeres.
Dirk Hockemeyer, Kathleen Collins. Nat Struct Mol Biol 2015
75
20

Defining the molecular mechanisms of human cell immortalization.
J W Shay, W E Wright, H Werbin. Biochim Biophys Acta 1991
372
20

Relationship between telomere shortening, genetic instability, and site of tumour origin in colorectal cancers.
E Rampazzo, R Bertorelle, L Serra, L Terrin, C Candiotto, S Pucciarelli, P Del Bianco, D Nitti, A De Rossi. Br J Cancer 2010
90
20


Frequency of TERT promoter mutations in human cancers.
João Vinagre, Ana Almeida, Helena Pópulo, Rui Batista, Joana Lyra, Vasco Pinto, Ricardo Coelho, Ricardo Celestino, Hugo Prazeres, Luis Lima,[...]. Nat Commun 2013
566
20

Telomere length regulates ISG15 expression in human cells.
Zhenjun Lou, Jun Wei, Harold Riethman, Joseph A Baur, Regina Voglauer, Jerry W Shay, Woodring E Wright. Aging (Albany NY) 2009
67
20

Epigenetic features of human telomeres.
María D Cubiles, Sonia Barroso, María I Vaquero-Sedas, Alicia Enguix, Andrés Aguilera, Miguel A Vega-Palas. Nucleic Acids Res 2018
49
20

Telomerase in the human organism.
Kathleen Collins, James R Mitchell. Oncogene 2002
433
20

Alternative lengthening of telomeres: models, mechanisms and implications.
Anthony J Cesare, Roger R Reddel. Nat Rev Genet 2010
610
20

Telomere length homeostasis and telomere position effect on a linear human artificial chromosome are dictated by the genetic background.
An Weuts, Thierry Voet, Jelle Verbeeck, Nathalie Lambrechts, Evelyne Wirix, Luc Schoonjans, Sophie Danloy, Peter Marynen, Guy Froyen. Nucleic Acids Res 2012
11
20


Connecting chromosomes, crisis, and cancer.
Richard S Maser, Ronald A DePinho. Science 2002
432
20

The human genome browser at UCSC.
W James Kent, Charles W Sugnet, Terrence S Furey, Krishna M Roskin, Tom H Pringle, Alan M Zahler, David Haussler. Genome Res 2002
20


Local enrichment of HP1alpha at telomeres alters their structure and regulation of telomere protection.
Tracy T Chow, Xiaoyu Shi, Jen-Hsuan Wei, Juan Guan, Guido Stadler, Bo Huang, Elizabeth H Blackburn. Nat Commun 2018
17
20

Telomeres: protecting chromosomes against genome instability.
Roderick J O'Sullivan, Jan Karlseder. Nat Rev Mol Cell Biol 2010
597
20

Homologous recombination-dependent repair of telomeric DSBs in proliferating human cells.
Pingsu Mao, Jingfan Liu, Zepeng Zhang, Hong Zhang, Haiying Liu, Song Gao, Yikang S Rong, Yong Zhao. Nat Commun 2016
40
20

Mammalian telomeres end in a large duplex loop.
J D Griffith, L Comeau, S Rosenfield, R M Stansel, A Bianchi, H Moss, T de Lange. Cell 1999
20

Mutation of the TERT promoter, switch to active chromatin, and monoallelic TERT expression in multiple cancers.
Josh Lewis Stern, Dan Theodorescu, Bert Vogelstein, Nickolas Papadopoulos, Thomas R Cech. Genes Dev 2015
122
20

Telomere length-dependent transcription and epigenetic modifications in promoters remote from telomere ends.
Ananda Kishore Mukherjee, Shalu Sharma, Suman Sengupta, Dhurjhoti Saha, Pankaj Kumar, Tabish Hussain, Vivek Srivastava, Sumitabho Deb Roy, Jerry W Shay, Shantanu Chowdhury. PLoS Genet 2018
28
20

Gene expression hallmarks of cellular ageing.
Stephen Frenk, Jonathan Houseley. Biogerontology 2018
49
20

Shelterin complex and associated factors at human telomeres.
Raffaella Diotti, Diego Loayza. Nucleus 2011
95
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.