A citation-based method for searching scientific literature

Fang-Yuan Teng, Zong-Zhe Jiang, Man Guo, Xiao-Zhen Tan, Feng Chen, Xu-Guang Xi, Yong Xu. Cell Mol Life Sci 2021
Times Cited: 2







List of co-cited articles
31 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mechanical diversity and folding intermediates of parallel-stranded G-quadruplexes with a bulge.
Yashuo Zhang, Yuanlei Cheng, Juannan Chen, Kewei Zheng, Huijuan You. Nucleic Acids Res 2021
2
100

G-quadruplex formation in telomeres enhances POT1/TPP1 protection against RPA binding.
Sujay Ray, Jigar N Bandaria, Mohammad H Qureshi, Ahmet Yildiz, Hamza Balci. Proc Natl Acad Sci U S A 2014
86
100

RNA G-quadruplex is resolved by repetitive and ATP-dependent mechanism of DHX36.
Ramreddy Tippana, Michael C Chen, Natalia A Demeshkina, Adrian R Ferré-D'Amaré, Sua Myong. Nat Commun 2019
29
100

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
100

DNA and RNA quadruplex-binding proteins.
Václav Brázda, Lucia Hároníková, Jack C C Liao, Miroslav Fojta. Int J Mol Sci 2014
149
100

Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Michael C Chen, Ramreddy Tippana, Natalia A Demeshkina, Pierre Murat, Shankar Balasubramanian, Sua Myong, Adrian R Ferré-D'Amaré. Nature 2018
111
100

Whole genome experimental maps of DNA G-quadruplexes in multiple species.
Giovanni Marsico, Vicki S Chambers, Aleksandr B Sahakyan, Patrick McCauley, Jonathan M Boutell, Marco Di Antonio, Shankar Balasubramanian. Nucleic Acids Res 2019
107
100

Telomere- and telomerase-interacting protein that unfolds telomere G-quadruplex and promotes telomere extension in mammalian cells.
Feng Wang, Ming-liang Tang, Zhi-xiong Zeng, Ren-yi Wu, Yong Xue, Yu-hua Hao, Dai-wen Pang, Yong Zhao, Zheng Tan. Proc Natl Acad Sci U S A 2012
35
100

High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
537
100

Single-molecule imaging reveals a common mechanism shared by G-quadruplex-resolving helicases.
Ramreddy Tippana, Helen Hwang, Patricia L Opresko, Vilhelm A Bohr, Sua Myong. Proc Natl Acad Sci U S A 2016
54
100

Single-molecule imaging reveals replication fork coupled formation of G-quadruplex structures hinders local replication stress signaling.
Wei Ting C Lee, Yandong Yin, Michael J Morten, Peter Tonzi, Pam Pam Gwo, Diana C Odermatt, Mauro Modesti, Sharon B Cantor, Kerstin Gari, Tony T Huang,[...]. Nat Commun 2021
9
100

Protein hnRNP A1 and its derivative Up1 unfold quadruplex DNA in the human KRAS promoter: implications for transcription.
Manikandan Paramasivam, Alexandro Membrino, Susanna Cogoi, Hirokazu Fukuda, Hitoshi Nakagama, Luigi E Xodo. Nucleic Acids Res 2009
105
100

Genetic interactions of G-quadruplexes in humans.
Katherine G Zyner, Darcie S Mulhearn, Santosh Adhikari, Sergio Martínez Cuesta, Marco Di Antonio, Nicolas Erard, Gregory J Hannon, David Tannahill, Shankar Balasubramanian. Elife 2019
41
100

Single-molecule visualization of DNA G-quadruplex formation in live cells.
Marco Di Antonio, Aleks Ponjavic, Antanas Radzevičius, Rohan T Ranasinghe, Marco Catalano, Xiaoyun Zhang, Jiazhen Shen, Lisa-Maria Needham, Steven F Lee, David Klenerman,[...]. Nat Chem 2020
70
100

Molecular mechanism of G-quadruplex unwinding helicase: sequential and repetitive unfolding of G-quadruplex by Pif1 helicase.
Xi-Miao Hou, Wen-Qiang Wu, Xiao-Lei Duan, Na-Nv Liu, Hai-Hong Li, Jing Fu, Shuo-Xing Dou, Ming Li, Xu-Guang Xi. Biochem J 2015
54
100


RHAU helicase stabilizes G4 in its nucleotide-free state and destabilizes G4 upon ATP hydrolysis.
Huijuan You, Simon Lattmann, Daniela Rhodes, Jie Yan. Nucleic Acids Res 2017
24
100

Pif1 family helicases suppress genome instability at G-quadruplex motifs.
Katrin Paeschke, Matthew L Bochman, P Daniela Garcia, Petr Cejka, Katherine L Friedman, Stephen C Kowalczykowski, Virginia A Zakian. Nature 2013
291
100

Periodic DNA patrolling underlies diverse functions of Pif1 on R-loops and G-rich DNA.
Ruobo Zhou, Jichuan Zhang, Matthew L Bochman, Virginia A Zakian, Taekjip Ha. Elife 2014
111
100

G-quadruplexes and helicases.
Oscar Mendoza, Anne Bourdoncle, Jean-Baptiste Boulé, Robert M Brosh, Jean-Louis Mergny. Nucleic Acids Res 2016
217
100

Mechanistic insight into the interaction of BLM helicase with intra-strand G-quadruplex structures.
Sujoy Chatterjee, Jennifer Zagelbaum, Pavel Savitsky, Andreas Sturzenegger, Diana Huttner, Pavel Janscak, Ian D Hickson, Opher Gileadi, Eli Rothenberg. Nat Commun 2014
64
100

G-quadruplex recognition and remodeling by the FANCJ helicase.
Colin G Wu, Maria Spies. Nucleic Acids Res 2016
50
100

Chemical profiling of DNA G-quadruplex-interacting proteins in live cells.
Xiaoyun Zhang, Jochen Spiegel, Sergio Martínez Cuesta, Santosh Adhikari, Shankar Balasubramanian. Nat Chem 2021
6
100


The regulation and functions of DNA and RNA G-quadruplexes.
Dhaval Varshney, Jochen Spiegel, Katherine Zyner, David Tannahill, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2020
178
100

The DEXH protein product of the DHX36 gene is the major source of tetramolecular quadruplex G4-DNA resolving activity in HeLa cell lysates.
James P Vaughn, Steven D Creacy, Eric D Routh, Christi Joyner-Butt, G Scott Jenkins, Sandra Pauli, Yoshikuni Nagamine, Steven A Akman. J Biol Chem 2005
118
100

ATR-X syndrome protein targets tandem repeats and influences allele-specific expression in a size-dependent manner.
Martin J Law, Karen M Lower, Hsiao P J Voon, Jim R Hughes, David Garrick, Vip Viprakasit, Matthew Mitson, Marco De Gobbi, Marco Marra, Andrew Morris,[...]. Cell 2010
265
100

POT1-TPP1 regulates telomeric overhang structural dynamics.
Helen Hwang, Noah Buncher, Patricia L Opresko, Sua Myong. Structure 2012
84
100

The Bloom's syndrome helicase unwinds G4 DNA.
H Sun, J K Karow, I D Hickson, N Maizels. J Biol Chem 1998
428
100

Molecular Mechanistic Insights into Drosophila DHX36-Mediated G-Quadruplex Unfolding: A Structure-Based Model.
Wei-Fei Chen, Stephane Rety, Hai-Lei Guo, Yang-Xue Dai, Wen-Qiang Wu, Na-Nv Liu, Daniel Auguin, Qian-Wen Liu, Xi-Miao Hou, Shuo-Xing Dou,[...]. Structure 2018
24
100

G-quadruplex conformation and dynamics are determined by loop length and sequence.
Ramreddy Tippana, Weikun Xiao, Sua Myong. Nucleic Acids Res 2014
90
100

Duplex DNA Is Weakened in Nanoconfinement.
Sagun Jonchhe, Shankar Pandey, Deepak Karna, Pravin Pokhrel, Yunxi Cui, Shubham Mishra, Hiroshi Sugiyama, Masayuki Endo, Hanbin Mao. J Am Chem Soc 2020
6
50



Nascent RNA transcripts facilitate the formation of G-quadruplexes.
Prakash Shrestha, Shan Xiao, Soma Dhakal, Zheng Tan, Hanbin Mao. Nucleic Acids Res 2014
14
50

Click chemistry assisted single-molecule fingerprinting reveals a 3D biomolecular folding funnel.
Zhongbo Yu, Deepak Koirala, Yunxi Cui, Leah F Easterling, Yuan Zhao, Hanbin Mao. J Am Chem Soc 2012
31
50

Reevaluation of telomerase inhibition by quadruplex ligands and their mechanisms of action.
Anne De Cian, Gael Cristofari, Patrick Reichenbach, Elsa De Lemos, David Monchaud, Marie-Paule Teulade-Fichou, Kazuo Shin-Ya, Laurent Lacroix, Joachim Lingner, Jean-Louis Mergny. Proc Natl Acad Sci U S A 2007
199
50


G-Quadruplex Secondary Structure Obtained from Circular Dichroism Spectroscopy.
Rafael Del Villar-Guerra, John O Trent, Jonathan B Chaires. Angew Chem Int Ed Engl 2018
150
50


Identification of LARK as a novel and conserved G-quadruplex binding protein in invertebrates and vertebrates.
Kangkang Niu, Lijun Xiang, Ying Jin, Yuling Peng, Feng Wu, Wenhuan Tang, Xiaojuan Zhang, Huimin Deng, Hui Xiang, Sheng Li,[...]. Nucleic Acids Res 2019
15
50

Mechanochemical properties of individual human telomeric RNA (TERRA) G-quadruplexes.
Philip M Yangyuoru, Amy Y Q Zhang, Zhe Shi, Deepak Koirala, Shankar Balasubramanian, Hanbin Mao. Chembiochem 2013
20
50

Coexistence of an ILPR i-motif and a partially folded structure with comparable mechanical stability revealed at the single-molecule level.
Soma Dhakal, Joseph D Schonhoft, Deepak Koirala, Zhongbo Yu, Soumitra Basu, Hanbin Mao. J Am Chem Soc 2010
75
50


Telomerase recruitment by the telomere end binding protein-beta facilitates G-quadruplex DNA unfolding in ciliates.
Katrin Paeschke, Stefan Juranek, Tomas Simonsson, Anne Hempel, Daniela Rhodes, Hans Joachim Lipps. Nat Struct Mol Biol 2008
100
50

A single-molecule platform for investigation of interactions between G-quadruplexes and small-molecule ligands.
Deepak Koirala, Soma Dhakal, Beth Ashbridge, Yuta Sannohe, Raphaël Rodriguez, Hiroshi Sugiyama, Shankar Balasubramanian, Hanbin Mao. Nat Chem 2011
131
50

FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.
Eitan Lerner, Anders Barth, Jelle Hendrix, Benjamin Ambrose, Victoria Birkedal, Scott C Blanchard, Richard Börner, Hoi Sung Chung, Thorben Cordes, Timothy D Craggs,[...]. Elife 2021
17
50

G-Quadruplex and Protein Binding by Single-Molecule FRET Microscopy.
Chun-Ying Lee, Christina McNerney, Sua Myong. Methods Mol Biol 2019
4
50

DNA Quadruple Helices in Nanotechnology.
Jean-Louis Mergny, Dipankar Sen. Chem Rev 2019
110
50

Stability and kinetics of G-quadruplex structures.
Andrew N Lane, J Brad Chaires, Robert D Gray, John O Trent. Nucleic Acids Res 2008
453
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.