A citation-based method for searching scientific literature

Zephan Melville, Kookjoo Kim, Oliver B Clarke, Andrew R Marks. Structure 2022
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Functional characterization of mammalian inositol 1,4,5-trisphosphate receptor isoforms.
Huiping Tu, Zhengnan Wang, Elena Nosyreva, Humbert De Smedt, Ilya Bezprozvanny. Biophys J 2005
91
100

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
100

Comprehensive investigation of CASK mutations and other genetic etiologies in 41 patients with intellectual disability and microcephaly with pontine and cerebellar hypoplasia (MICPCH).
Shin Hayashi, Daniela Tiaki Uehara, Kousuke Tanimoto, Seiji Mizuno, Yasutsugu Chinen, Shinobu Fukumura, Jun-Ichi Takanashi, Hitoshi Osaka, Nobuhiko Okamoto, Johji Inazawa. PLoS One 2017
25
100

A practical guide to the preparation of Ca2+ buffers.
D M Bers, C W Patton, R Nuccitelli. Methods Cell Biol 1994
480
100

Collaboration gets the most out of software.
Andrew Morin, Ben Eisenbraun, Jason Key, Paul C Sanschagrin, Michael A Timony, Michelle Ottaviano, Piotr Sliz. Elife 2013
485
100

Structural Basis for Gating and Activation of RyR1.
Amédée des Georges, Oliver B Clarke, Ran Zalk, Qi Yuan, Kendall J Condon, Robert A Grassucci, Wayne A Hendrickson, Andrew R Marks, Joachim Frank. Cell 2016
191
100

Cryo-EM structure of human type-3 inositol triphosphate receptor reveals the presence of a self-binding peptide that acts as an antagonist.
Caleigh M Azumaya, Emily A Linton, Caitlin J Risener, Terunaga Nakagawa, Erkan Karakas. J Biol Chem 2020
7
100

The central domain of cardiac ryanodine receptor governs channel activation, regulation, and stability.
Wenting Guo, Bo Sun, John Paul Estillore, Ruiwu Wang, S R Wayne Chen. J Biol Chem 2020
4
100

Structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with its ligand.
Ivan Bosanac, Jean-René Alattia, Tapas K Mal, Jenny Chan, Susanna Talarico, Frances K Tong, Kit I Tong, Fumio Yoshikawa, Teiichi Furuichi, Miwako Iwai,[...]. Nature 2002
258
100


Critical regions for activation gating of the inositol 1,4,5-trisphosphate receptor.
Keiko Uchida, Hiroshi Miyauchi, Teiichi Furuichi, Takayuki Michikawa, Katsuhiko Mikoshiba. J Biol Chem 2003
115
100

IP3 receptor mutations and brain diseases in human and rodents.
Chihiro Hisatsune, Katsuhiko Mikoshiba. J Neurochem 2017
33
100



Gating machinery of InsP3R channels revealed by electron cryomicroscopy.
Guizhen Fan, Matthew L Baker, Zhao Wang, Mariah R Baker, Pavel A Sinyagovskiy, Wah Chiu, Steven J Ludtke, Irina I Serysheva. Nature 2015
143
100

UCSF ChimeraX: Structure visualization for researchers, educators, and developers.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Elaine C Meng, Gregory S Couch, Tristan I Croll, John H Morris, Thomas E Ferrin. Protein Sci 2021
526
100


MolProbity: More and better reference data for improved all-atom structure validation.
Christopher J Williams, Jeffrey J Headd, Nigel W Moriarty, Michael G Prisant, Lizbeth L Videau, Lindsay N Deis, Vishal Verma, Daniel A Keedy, Bradley J Hintze, Vincent B Chen,[...]. Protein Sci 2018
961
100




Recessive and Dominant De Novo ITPR1 Mutations Cause Gillespie Syndrome.
Sylvie Gerber, Kamil J Alzayady, Lydie Burglen, Dominique Brémond-Gignac, Valentina Marchesin, Olivier Roche, Marlène Rio, Benoit Funalot, Raphaël Calmon, Alexandra Durr,[...]. Am J Hum Genet 2016
75
100

Inositol trisphosphate receptor Ca2+ release channels.
J Kevin Foskett, Carl White, King-Ho Cheung, Don-On Daniel Mak. Physiol Rev 2007
823
100

Tyr-167/Trp-168 in type 1/3 inositol 1,4,5-trisphosphate receptor mediates functional coupling between ligand binding and channel opening.
Haruka Yamazaki, Jenny Chan, Mitsuhiko Ikura, Takayuki Michikawa, Katsuhiko Mikoshiba. J Biol Chem 2010
49
100

A central core disease mutation in the Ca2+-binding site of skeletal muscle ryanodine receptor impairs single-channel regulation.
Venkat R Chirasani, Le Xu, Hannah G Addis, Daniel A Pasek, Nikolay V Dokholyan, Gerhard Meissner, Naohiro Yamaguchi. Am J Physiol Cell Physiol 2019
12
100


Cryo-EM reveals ligand induced allostery underlying InsP3R channel gating.
Guizhen Fan, Mariah R Baker, Zhao Wang, Alexander B Seryshev, Steven J Ludtke, Matthew L Baker, Irina I Serysheva. Cell Res 2018
23
100

Exome Sequence Analysis Suggests that Genetic Burden Contributes to Phenotypic Variability and Complex Neuropathy.
Claudia Gonzaga-Jauregui, Tamar Harel, Tomasz Gambin, Maria Kousi, Laurie B Griffin, Ludmila Francescatto, Burcak Ozes, Ender Karaca, Shalini N Jhangiani, Matthew N Bainbridge,[...]. Cell Rep 2015
157
100

Blotting-free and lossless cryo-electron microscopy grid preparation from nanoliter-sized protein samples and single-cell extracts.
Stefan A Arnold, Stefan Albiez, Andrej Bieri, Anastasia Syntychaki, Ricardo Adaixo, Robert A McLeod, Kenneth N Goldie, Henning Stahlberg, Thomas Braun. J Struct Biol 2017
54
100

The InsP3 receptor and intracellular Ca2+ signaling.
K Mikoshiba. Curr Opin Neurobiol 1997
154
100

Identification of novel and hotspot mutations in the channel domain of ITPR1 in two patients with Gillespie syndrome.
Maria Lisa Dentici, Sabina Barresi, Marta Nardella, Emanuele Bellacchio, Paolo Alfieri, Alessandro Bruselles, Francesca Pantaleoni, Alberto Danieli, Giancarlo Iarossi, Marco Cappa,[...]. Gene 2017
17
100

Structural basis for diamide modulation of ryanodine receptor.
Ruifang Ma, Omid Haji-Ghassemi, Dan Ma, Heng Jiang, Lianyun Lin, Li Yao, Arthur Samurkas, Yuxin Li, Yiwen Wang, Peng Cao,[...]. Nat Chem Biol 2020
19
100

Inositol 1,4,5-Trisphosphate Receptors in Human Disease: A Comprehensive Update.
Jessica Gambardella, Angela Lombardi, Marco Bruno Morelli, John Ferrara, Gaetano Santulli. J Clin Med 2020
12
100

cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination.
Ali Punjani, John L Rubinstein, David J Fleet, Marcus A Brubaker. Nat Methods 2017
100

Protein complex expression by using multigene baculoviral vectors.
Daniel J Fitzgerald, Philipp Berger, Christiane Schaffitzel, Kazuhiro Yamada, Timothy J Richmond, Imre Berger. Nat Methods 2006
234
100

Structural basis for the gating mechanism of the type 2 ryanodine receptor RyR2.
Wei Peng, Huaizong Shen, Jianping Wu, Wenting Guo, Xiaojing Pan, Ruiwu Wang, S R Wayne Chen, Nieng Yan. Science 2016
158
100

Structural insights into Ca(2+)-activated long-range allosteric channel gating of RyR1.
Risheng Wei, Xue Wang, Yan Zhang, Saptarshi Mukherjee, Lei Zhang, Qiang Chen, Xinrui Huang, Shan Jing, Congcong Liu, Shuang Li,[...]. Cell Res 2016
58
100

New tools for automated high-resolution cryo-EM structure determination in RELION-3.
Jasenko Zivanov, Takanori Nakane, Björn O Forsberg, Dari Kimanius, Wim Jh Hagen, Erik Lindahl, Sjors Hw Scheres. Elife 2018
100

HOLE: a program for the analysis of the pore dimensions of ion channel structural models.
O S Smart, J G Neduvelil, X Wang, B A Wallace, M S Sansom. J Mol Graph 1996
929
100






Inositol 1,4,5-trisphosphate Receptor Mutations associated with Human Disease.
Lara E Terry, Kamil J Alzayady, Esraa Furati, David I Yule. Messenger (Los Angel) 2018
10
100

MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy.
Shawn Q Zheng, Eugene Palovcak, Jean-Paul Armache, Kliment A Verba, Yifan Cheng, David A Agard. Nat Methods 2017
100


Pathophysiological consequences of isoform-specific IP3 receptor mutations.
Martijn Kerkhofs, Bruno Seitaj, Hristina Ivanova, Giovanni Monaco, Geert Bultynck, Jan B Parys. Biochim Biophys Acta Mol Cell Res 2018
15
100




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.