A citation-based method for searching scientific literature

Bo-Ruei Chen, Yinan Wang, Anthony Tubbs, Dali Zong, Faith C Fowler, Nicholas Zolnerowich, Wei Wu, Amelia Bennett, Chun-Chin Chen, Wendy Feng, Andre Nussenzweig, Jessica K Tyler, Barry P Sleckman. Elife 2021
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


An autoregulatory mechanism imposes allosteric control on the V(D)J recombinase by histone H3 methylation.
Chao Lu, Alyssa Ward, John Bettridge, Yun Liu, Stephen Desiderio. Cell Rep 2015
22
100

HMCES Functions in the Alternative End-Joining Pathway of the DNA DSB Repair during Class Switch Recombination in B Cells.
Vipul Shukla, Levon Halabelian, Sanjana Balagere, Daniela Samaniego-Castruita, Douglas E Feldman, Cheryl H Arrowsmith, Anjana Rao, L Aravind. Mol Cell 2020
2
100


Genetic interaction between the non-homologous end-joining factors during B and T lymphocyte development: In vivo mouse models.
Sergio Castañeda-Zegarra, Marion Fernandez-Berrocal, Max Tkachov, Rouan Yao, Nikki Lyn Esnardo Upfold, Valentyn Oksenych. Scand J Immunol 2020
5
100

ATM, ATR, and DNA-PK: The Trinity at the Heart of the DNA Damage Response.
Andrew N Blackford, Stephen P Jackson. Mol Cell 2017
660
100

XLF regulates filament architecture of the XRCC4·ligase IV complex.
Michal Hammel, Yaping Yu, Shujuan Fang, Susan P Lees-Miller, John A Tainer. Structure 2010
84
100

A mechanism for the suppression of homologous recombination in G1 cells.
Alexandre Orthwein, Sylvie M Noordermeer, Marcus D Wilson, Sébastien Landry, Radoslav I Enchev, Alana Sherker, Meagan Munro, Jordan Pinder, Jayme Salsman, Graham Dellaire,[...]. Nature 2015
284
100

Physical interaction between the herpes simplex virus type 1 exonuclease, UL12, and the DNA double-strand break-sensing MRN complex.
Nandakumar Balasubramanian, Ping Bai, Gregory Buchek, George Korza, Sandra K Weller. J Virol 2010
44
100

Sliding sleeves of XRCC4-XLF bridge DNA and connect fragments of broken DNA.
Ineke Brouwer, Gerrit Sitters, Andrea Candelli, Stephanie J Heerema, Iddo Heller, Abinadabe J de Melo, Hongshan Zhang, Davide Normanno, Mauro Modesti, Erwin J G Peterman,[...]. Nature 2016
87
100



Role of mammalian Mre11 in classical and alternative nonhomologous end joining.
Anyong Xie, Amy Kwok, Ralph Scully. Nat Struct Mol Biol 2009
237
100

CRISPR/Cas9 cleavages in budding yeast reveal templated insertions and strand-specific insertion/deletion profiles.
Brenda R Lemos, Adam C Kaplan, Ji Eun Bae, Alexander E Ferrazzoli, James Kuo, Ranjith P Anand, David P Waterman, James E Haber. Proc Natl Acad Sci U S A 2018
75
100


53BP1: a DSB escort.
Zachary Mirman, Titia de Lange. Genes Dev 2020
58
100

A Mechanism to Minimize Errors during Non-homologous End Joining.
Benjamin M Stinson, Andrew T Moreno, Johannes C Walter, Joseph J Loparo. Mol Cell 2020
24
100

Absence of XRCC4 and its paralogs in human cells reveal differences in outcomes for DNA repair and V(D)J recombination.
Brian Ruis, Amy Molan, Taylor Takasugi, Eric A Hendrickson. DNA Repair (Amst) 2020
3
100

58
100

Activation of DSB processing requires phosphorylation of CtIP by ATR.
Shaun E Peterson, Yinyin Li, Foon Wu-Baer, Brian T Chait, Richard Baer, Hong Yan, Max E Gottesman, Jean Gautier. Mol Cell 2013
89
100

C1QBP Promotes Homologous Recombination by Stabilizing MRE11 and Controlling the Assembly and Activation of MRE11/RAD50/NBS1 Complex.
Yongtai Bai, Weibin Wang, Siyu Li, Jun Zhan, Hanxiao Li, Meimei Zhao, Xiao Albert Zhou, Shiwei Li, Xiaoman Li, Yanfei Huo,[...]. Mol Cell 2019
21
100

Evolutionary and Comparative Analysis of Bacterial Nonhomologous End Joining Repair.
Mohak Sharda, Anjana Badrinarayanan, Aswin Sai Narain Seshasayee. Genome Biol Evol 2020
4
100

The embryonic lethality in DNA ligase IV-deficient mice is rescued by deletion of Ku: implications for unifying the heterogeneous phenotypes of NHEJ mutants.
Zarir E Karanjawala, Noritaka Adachi, Ryan A Irvine, Eui K Oh, Darryl Shibata, Klaus Schwarz, Chih-Lin Hsieh, Michael R Lieber. DNA Repair (Amst) 2002
73
100

Mechanism of suppression of chromosomal instability by DNA polymerase POLQ.
Matthew J Yousefzadeh, David W Wyatt, Kei-Ichi Takata, Yunxiang Mu, Sean C Hensley, Junya Tomida, Göran O Bylund, Sylvie Doublié, Erik Johansson, Dale A Ramsden,[...]. PLoS Genet 2014
144
100

Essential Roles for Polymerase θ-Mediated End Joining in the Repair of Chromosome Breaks.
David W Wyatt, Wanjuan Feng, Michael P Conlin, Matthew J Yousefzadeh, Steven A Roberts, Piotr Mieczkowski, Richard D Wood, Gaorav P Gupta, Dale A Ramsden. Mol Cell 2016
118
100

Characterization of the APLF FHA-XRCC1 phosphopeptide interaction and its structural and functional implications.
Kyungmin Kim, Lars C Pedersen, Thomas W Kirby, Eugene F DeRose, Robert E London. Nucleic Acids Res 2017
7
100

Regulation of DNA repair pathway choice in S and G2 phases by the NHEJ inhibitor CYREN.
Nausica Arnoult, Adriana Correia, Jiao Ma, Anna Merlo, Sara Garcia-Gomez, Marija Maric, Marco Tognetti, Christopher W Benner, Simon J Boulton, Alan Saghatelian,[...]. Nature 2017
101
100

Polo-like kinase 3 regulates CtIP during DNA double-strand break repair in G1.
Olivia Barton, Steffen C Naumann, Ronja Diemer-Biehs, Julia Künzel, Monika Steinlage, Sandro Conrad, Nodar Makharashvili, Jiadong Wang, Lin Feng, Bernard S Lopez,[...]. J Cell Biol 2014
66
100

Biochemical evidence for Ku-independent backup pathways of NHEJ.
Huichen Wang, Ange Ronel Perrault, Yoshihiko Takeda, Wei Qin, Hongyan Wang, George Iliakis. Nucleic Acids Res 2003
178
100

RAG2 mutants alter DSB repair pathway choice in vivo and illuminate the nature of 'alternative NHEJ'.
Vered Gigi, Susanna Lewis, Olga Shestova, Martina Mijušković, Ludovic Deriano, Wenzhao Meng, Eline T Luning Prak, David B Roth. Nucleic Acids Res 2014
24
100

Ubiquitylation of Ku80 by RNF126 Promotes Completion of Nonhomologous End Joining-Mediated DNA Repair.
Noriko Ishida, Tadashi Nakagawa, Shun-Ichiro Iemura, Akira Yasui, Hiroki Shima, Yasutake Katoh, Yuko Nagasawa, Toru Natsume, Kazuhiko Igarashi, Keiko Nakayama. Mol Cell Biol 2017
28
100

Ribonucleotide incorporation enables repair of chromosome breaks by nonhomologous end joining.
John M Pryor, Michael P Conlin, Juan Carvajal-Garcia, Megan E Luedeman, Adam J Luthman, George W Small, Dale A Ramsden. Science 2018
41
100

XRCC4 protein interactions with XRCC4-like factor (XLF) create an extended grooved scaffold for DNA ligation and double strand break repair.
Michal Hammel, Martial Rey, Yaping Yu, Rajam S Mani, Scott Classen, Mona Liu, Michael E Pique, Shujuan Fang, Brandi L Mahaney, Michael Weinfeld,[...]. J Biol Chem 2011
114
100

Specific Roles of XRCC4 Paralogs PAXX and XLF during V(D)J Recombination.
Chloé Lescale, Hélène Lenden Hasse, Andrew N Blackford, Gabriel Balmus, Joy J Bianchi, Wei Yu, Léa Bacoccina, Angélique Jarade, Christophe Clouin, Rohan Sivapalan,[...]. Cell Rep 2016
45
100

Interplay of p53 and DNA-repair protein XRCC4 in tumorigenesis, genomic stability and development.
Y Gao, D O Ferguson, W Xie, J P Manis, J Sekiguchi, K M Frank, J Chaudhuri, J Horner, R A DePinho, F W Alt. Nature 2000
448
100

CtIP-mediated DNA resection is dispensable for IgH class switch recombination by alternative end-joining.
Xiaobin S Wang, Junfei Zhao, Foon Wu-Baer, Zhengping Shao, Brian J Lee, Olivia M Cupo, Raul Rabadan, Jean Gautier, Richard Baer, Shan Zha. Proc Natl Acad Sci U S A 2020
5
100

Plugged into the Ku-DNA hub: The NHEJ network.
Philippe Frit, Virginie Ropars, Mauro Modesti, Jean Baptiste Charbonnier, Patrick Calsou. Prog Biophys Mol Biol 2019
27
100

HELB Is a Feedback Inhibitor of DNA End Resection.
Ján Tkáč, Guotai Xu, Hemanta Adhikary, Jordan T F Young, David Gallo, Cristina Escribano-Díaz, Jana Krietsch, Alexandre Orthwein, Meagan Munro, Wendy Sol,[...]. Mol Cell 2016
79
100

MRI Is a DNA Damage Response Adaptor during Classical Non-homologous End Joining.
Putzer J Hung, Britney Johnson, Bo-Ruei Chen, Andrea K Byrum, Andrea L Bredemeyer, William T Yewdell, Tanya E Johnson, Brian J Lee, Shruthi Deivasigamani, Issa Hindi,[...]. Mol Cell 2018
48
100

53BP1 promotes microhomology-mediated end-joining in G1-phase cells.
Xiahui Xiong, Zhanwen Du, Ying Wang, Zhihui Feng, Pan Fan, Chunhong Yan, Henning Willers, Junran Zhang. Nucleic Acids Res 2015
40
100

DYNLL1 binds to MRE11 to limit DNA end resection in BRCA1-deficient cells.
Yizhou Joseph He, Khyati Meghani, Marie-Christine Caron, Chunyu Yang, Daryl A Ronato, Jie Bian, Anchal Sharma, Jessica Moore, Joshi Niraj, Alexandre Detappe,[...]. Nature 2018
89
100


DNA ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation.
Deniz Simsek, Erika Brunet, Sunnie Yan-Wai Wong, Sachin Katyal, Yankun Gao, Peter J McKinnon, Jacqueline Lou, Lei Zhang, James Li, Edward J Rebar,[...]. PLoS Genet 2011
198
100

Repair of G1 induced DNA double-strand breaks in S-G2/M by alternative NHEJ.
Wei Yu, Chloé Lescale, Loelia Babin, Marie Bedora-Faure, Hélène Lenden-Hasse, Ludivine Baron, Caroline Demangel, José Yelamos, Erika Brunet, Ludovic Deriano. Nat Commun 2020
8
100

Chromosomal Loop Domains Direct the Recombination of Antigen Receptor Genes.
Jiazhi Hu, Yu Zhang, Lijuan Zhao, Richard L Frock, Zhou Du, Robin M Meyers, Fei-long Meng, David G Schatz, Frederick W Alt. Cell 2015
96
100

A human XRCC4-XLF complex bridges DNA.
Sara N Andres, Alexandra Vergnes, Dejan Ristic, Claire Wyman, Mauro Modesti, Murray Junop. Nucleic Acids Res 2012
96
100

DNA Double-Strand Break Resection Occurs during Non-homologous End Joining in G1 but Is Distinct from Resection during Homologous Recombination.
Ronja Biehs, Monika Steinlage, Olivia Barton, Szilvia Juhász, Julia Künzel, Julian Spies, Atsushi Shibata, Penny A Jeggo, Markus Löbrich. Mol Cell 2017
117
100

Growth retardation and leaky SCID phenotype of Ku70-deficient mice.
Y Gu, K J Seidl, G A Rathbun, C Zhu, J P Manis, N van der Stoep, L Davidson, H L Cheng, J M Sekiguchi, K Frank,[...]. Immunity 1997
346
100

Impairment of V(D)J recombination in double-strand break repair mutants.
G E Taccioli, G Rathbun, E Oltz, T Stamato, P A Jeggo, F W Alt. Science 1993
432
100

ASTE1 promotes shieldin-complex-mediated DNA repair by attenuating end resection.
Fei Zhao, Wootae Kim, Huanyao Gao, Chao Liu, Yong Zhang, Yuping Chen, Min Deng, Qin Zhou, Jinzhou Huang, Qi Hu,[...]. Nat Cell Biol 2021
4
100

Rad50 zinc hook functions as a constitutive dimerization module interchangeable with SMC hinge.
Hisashi Tatebe, Chew Theng Lim, Hiroki Konno, Kazuhiro Shiozaki, Akira Shinohara, Takayuki Uchihashi, Asako Furukohri. Nat Commun 2020
12
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.