A citation-based method for searching scientific literature

Brian M Schilder, Jack Humphrey, Towfique Raj. Bioinformatics 2021
Times Cited: 8







List of co-cited articles
59 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


LD Score regression distinguishes confounding from polygenicity in genome-wide association studies.
Brendan K Bulik-Sullivan, Po-Ru Loh, Hilary K Finucane, Stephan Ripke, Jian Yang, Nick Patterson, Mark J Daly, Alkes L Price, Benjamin M Neale. Nat Genet 2015
75


Partitioning heritability by functional annotation using genome-wide association summary statistics.
Hilary K Finucane, Brendan Bulik-Sullivan, Alexander Gusev, Gosia Trynka, Yakir Reshef, Po-Ru Loh, Verneri Anttila, Han Xu, Chongzhi Zang, Kyle Farh,[...]. Nat Genet 2015
962
62

Bayesian test for colocalisation between pairs of genetic association studies using summary statistics.
Claudia Giambartolomei, Damjan Vukcevic, Eric E Schadt, Lude Franke, Aroon D Hingorani, Chris Wallace, Vincent Plagnol. PLoS Genet 2014
864
62

Identification of novel risk loci, causal insights, and heritable risk for Parkinson's disease: a meta-analysis of genome-wide association studies.
Mike A Nalls, Cornelis Blauwendraat, Costanza L Vallerga, Karl Heilbron, Sara Bandres-Ciga, Diana Chang, Manuela Tan, Demis A Kia, Alastair J Noyce, Angli Xue,[...]. Lancet Neurol 2019
625
50

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
50

Functionally informed fine-mapping and polygenic localization of complex trait heritability.
Omer Weissbrod, Farhad Hormozdiari, Christian Benner, Ran Cui, Jacob Ulirsch, Steven Gazal, Armin P Schoech, Bryce van de Geijn, Yakir Reshef, Carla Márquez-Luna,[...]. Nat Genet 2020
47
50

Brain cell type-specific enhancer-promoter interactome maps and disease-risk association.
Alexi Nott, Inge R Holtman, Nicole G Coufal, Johannes C M Schlachetzki, Miao Yu, Rong Hu, Claudia Z Han, Monique Pena, Jiayang Xiao, Yin Wu,[...]. Science 2019
217
50

FINEMAP: efficient variable selection using summary data from genome-wide association studies.
Christian Benner, Chris C A Spencer, Aki S Havulinna, Veikko Salomaa, Samuli Ripatti, Matti Pirinen. Bioinformatics 2016
266
37

UK biobank: an open access resource for identifying the causes of a wide range of complex diseases of middle and old age.
Cathie Sudlow, John Gallacher, Naomi Allen, Valerie Beral, Paul Burton, John Danesh, Paul Downey, Paul Elliott, Jane Green, Martin Landray,[...]. PLoS Med 2015
37

Innate immune activity conditions the effect of regulatory variants upon monocyte gene expression.
Benjamin P Fairfax, Peter Humburg, Seiko Makino, Vivek Naranbhai, Daniel Wong, Evelyn Lau, Luke Jostins, Katharine Plant, Robert Andrews, Chris McGee,[...]. Science 2014
475
37

Fine-mapping genetic associations.
Anna Hutchinson, Jennifer Asimit, Chris Wallace. Hum Mol Genet 2020
12
37


A map of transcriptional heterogeneity and regulatory variation in human microglia.
Adam M H Young, Natsuhiko Kumasaka, Fiona Calvert, Timothy R Hammond, Andrew Knights, Nikolaos Panousis, Jun Sung Park, Jeremy Schwartzentruber, Jimmy Liu, Kousik Kundu,[...]. Nat Genet 2021
43
37

Prioritizing Parkinson's disease genes using population-scale transcriptomic data.
Yang I Li, Garrett Wong, Jack Humphrey, Towfique Raj. Nat Commun 2019
69
37


LocusZoom: regional visualization of genome-wide association scan results.
Randall J Pruim, Ryan P Welch, Serena Sanna, Tanya M Teslovich, Peter S Chines, Terry P Gliedt, Michael Boehnke, Gonçalo R Abecasis, Cristen J Willer. Bioinformatics 2010
37

Structural haplotypes and recent evolution of the human 17q21.31 region.
Linda M Boettger, Robert E Handsaker, Michael C Zody, Steven A McCarroll. Nat Genet 2012
76
25

BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis.
Steffen Durinck, Yves Moreau, Arek Kasprzyk, Sean Davis, Bart De Moor, Alvis Brazma, Wolfgang Huber. Bioinformatics 2005
25

Linkage disequilibrium-dependent architecture of human complex traits shows action of negative selection.
Steven Gazal, Hilary K Finucane, Nicholas A Furlotte, Po-Ru Loh, Pier Francesco Palamara, Xuanyao Liu, Armin Schoech, Brendan Bulik-Sullivan, Benjamin M Neale, Alexander Gusev,[...]. Nat Genet 2017
163
25

Fine-mapping and functional studies highlight potential causal variants for rheumatoid arthritis and type 1 diabetes.
Harm-Jan Westra, Marta Martínez-Bonet, Suna Onengut-Gumuscu, Annette Lee, Yang Luo, Nikola Teslovich, Jane Worthington, Javier Martin, Tom Huizinga, Lars Klareskog,[...]. Nat Genet 2018
84
25



The Parkinson's Disease Genome-Wide Association Study Locus Browser.
Francis P Grenn, Jonggeol J Kim, Mary B Makarious, Hirotaka Iwaki, Anastasia Illarionova, Kajsa Brolin, Jillian H Kluss, Artur F Schumacher-Schuh, Hampton Leonard, Faraz Faghri,[...]. Mov Disord 2020
36
25

Integrative transcriptome analyses of the aging brain implicate altered splicing in Alzheimer's disease susceptibility.
Towfique Raj, Yang I Li, Garrett Wong, Jack Humphrey, Minghui Wang, Satesh Ramdhani, Ying-Chih Wang, Bernard Ng, Ishaan Gupta, Vahram Haroutunian,[...]. Nat Genet 2018
159
25

Functional architecture of low-frequency variants highlights strength of negative selection across coding and non-coding annotations.
Steven Gazal, Po-Ru Loh, Hilary K Finucane, Andrea Ganna, Armin Schoech, Shamil Sunyaev, Alkes L Price. Nat Genet 2018
59
25

Single-cell epigenomic analyses implicate candidate causal variants at inherited risk loci for Alzheimer's and Parkinson's diseases.
M Ryan Corces, Anna Shcherbina, Soumya Kundu, Michael J Gloudemans, Laure Frésard, Jeffrey M Granja, Bryan H Louie, Tiffany Eulalio, Shadi Shams, S Tansu Bagdatli,[...]. Nat Genet 2020
88
25

Leveraging Functional-Annotation Data in Trans-ethnic Fine-Mapping Studies.
Gleb Kichaev, Bogdan Pasaniuc. Am J Hum Genet 2015
97
25

The UK Biobank resource with deep phenotyping and genomic data.
Clare Bycroft, Colin Freeman, Desislava Petkova, Gavin Band, Lloyd T Elliott, Kevin Sharp, Allan Motyer, Damjan Vukcevic, Olivier Delaneau, Jared O'Connell,[...]. Nature 2018
25

Sequential regulatory activity prediction across chromosomes with convolutional neural networks.
David R Kelley, Yakir A Reshef, Maxwell Bileschi, David Belanger, Cory Y McLean, Jasper Snoek. Genome Res 2018
124
25

From genome-wide associations to candidate causal variants by statistical fine-mapping.
Daniel J Schaid, Wenan Chen, Nicholas B Larson. Nat Rev Genet 2018
300
25

High-throughput identification of human SNPs affecting regulatory element activity.
Joris van Arensbergen, Ludo Pagie, Vincent D FitzPatrick, Marcel de Haas, Marijke P Baltissen, Federico Comoglio, Robin H van der Weide, Hans Teunissen, Urmo Võsa, Lude Franke,[...]. Nat Genet 2019
87
25


A compendium of uniformly processed human gene expression and splicing quantitative trait loci.
Nurlan Kerimov, James D Hayhurst, Kateryna Peikova, Jonathan R Manning, Peter Walter, Liis Kolberg, Marija Samoviča, Manoj Pandian Sakthivel, Ivan Kuzmin, Stephen J Trevanion,[...]. Nat Genet 2021
43
25

Parkinson disease.
Werner Poewe, Klaus Seppi, Caroline M Tanner, Glenda M Halliday, Patrik Brundin, Jens Volkmann, Anette-Eleonore Schrag, Anthony E Lang. Nat Rev Dis Primers 2017
25

Characterizing primary human microglia: A comparative study with myeloid subsets and culture models.
J Melief, M A M Sneeboer, M Litjens, P R Ormel, S J M C Palmen, I Huitinga, R S Kahn, E M Hol, L D de Witte. Glia 2016
55
25



STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
25

Dream: powerful differential expression analysis for repeated measures designs.
Gabriel E Hoffman, Panos Roussos. Bioinformatics 2021
35
25

Genetic meta-analysis of diagnosed Alzheimer's disease identifies new risk loci and implicates Aβ, tau, immunity and lipid processing.
Brian W Kunkle, Benjamin Grenier-Boley, Rebecca Sims, Joshua C Bis, Vincent Damotte, Adam C Naj, Anne Boland, Maria Vronskaya, Sven J van der Lee, Alexandre Amlie-Wolf,[...]. Nat Genet 2019
995
25


Next-generation genotype imputation service and methods.
Sayantan Das, Lukas Forer, Sebastian Schönherr, Carlo Sidore, Adam E Locke, Alan Kwong, Scott I Vrieze, Emily Y Chew, Shawn Levy, Matt McGue,[...]. Nat Genet 2016
25

Polarization of the effects of autoimmune and neurodegenerative risk alleles in leukocytes.
Towfique Raj, Katie Rothamel, Sara Mostafavi, Chun Ye, Mark N Lee, Joseph M Replogle, Ting Feng, Michelle Lee, Natasha Asinovski, Irene Frohlich,[...]. Science 2014
327
25


An xQTL map integrates the genetic architecture of the human brain's transcriptome and epigenome.
Bernard Ng, Charles C White, Hans-Ulrich Klein, Solveig K Sieberts, Cristin McCabe, Ellis Patrick, Jishu Xu, Lei Yu, Chris Gaiteri, David A Bennett,[...]. Nat Neurosci 2017
190
25

Integrative analysis of 111 reference human epigenomes.
Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J Ziller,[...]. Nature 2015
25

Genetic and epigenetic fine mapping of causal autoimmune disease variants.
Kyle Kai-How Farh, Alexander Marson, Jiang Zhu, Markus Kleinewietfeld, William J Housley, Samantha Beik, Noam Shoresh, Holly Whitton, Russell J H Ryan, Alexander A Shishkin,[...]. Nature 2015
25

Principal components analysis corrects for stratification in genome-wide association studies.
Alkes L Price, Nick J Patterson, Robert M Plenge, Michael E Weinblatt, Nancy A Shadick, David Reich. Nat Genet 2006
25

The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019.
Annalisa Buniello, Jacqueline A L MacArthur, Maria Cerezo, Laura W Harris, James Hayhurst, Cinzia Malangone, Aoife McMahon, Joannella Morales, Edward Mountjoy, Elliot Sollis,[...]. Nucleic Acids Res 2019
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.