A citation-based method for searching scientific literature


List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Capturing chromosome conformation.
Job Dekker, Karsten Rippe, Martijn Dekker, Nancy Kleckner. Science 2002
100



Looping and interaction between hypersensitive sites in the active beta-globin locus.
Bas Tolhuis, Robert Jan Palstra, Erik Splinter, Frank Grosveld, Wouter de Laat. Mol Cell 2002
993
100

A vertebrate Polycomb response element governs segmentation of the posterior hindbrain.
Angela Sing, Dylan Pannell, Angelo Karaiskakis, Kendra Sturgeon, Malek Djabali, James Ellis, Howard D Lipshitz, Sabine P Cordes. Cell 2009
179
100


The multiscale effects of polycomb mechanisms on 3D chromatin folding.
Thierry Cheutin, Giacomo Cavalli. Crit Rev Biochem Mol Biol 2019
18
100

A region of the human HOXD cluster that confers polycomb-group responsiveness.
Caroline J Woo, Peter V Kharchenko, Laurence Daheron, Peter J Park, Robert E Kingston. Cell 2010
239
100

Chromatin immunoprecipitation: a tool for studying histone acetylation and transcription factor binding.
Virginia A Spencer, Jian-Min Sun, Lin Li, James R Davie. Methods 2003
138
100

Testing the position-effect variegation hypothesis for facioscapulohumeral muscular dystrophy by analysis of histone modification and gene expression in subtelomeric 4q.
Guanchao Jiang, Fan Yang, Petra G M van Overveld, Vettaikorumakankav Vedanarayanan, Silvere van der Maarel, Melanie Ehrlich. Hum Mol Genet 2003
116
100

Epigenetic regulation and transcriptional memory in development; selection facilitating prudence.
Akanksha Verma, Jayant Maini, Shruti Jain, Mohsen Ghasemi, Surbhi Kohli, Vani Brahmachari. Int J Dev Biol 2020
1
100

Dosage-dependent modifiers of polycomb and antennapedia mutations in Drosophila.
J A Kennison, J W Tamkun. Proc Natl Acad Sci U S A 1988
393
100


Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains.
Manching Ku, Richard P Koche, Esther Rheinbay, Eric M Mendenhall, Mitsuhiro Endoh, Tarjei S Mikkelsen, Aviva Presser, Chad Nusbaum, Xiaohui Xie, Andrew S Chi,[...]. PLoS Genet 2008
743
100

Human PRE-PIK3C2B, an intronic cis-element with dual function of activation and repression.
Jayant Maini, Mohsen Ghasemi, Deepti Yandhuri, Suman S Thakur, Vani Brahmachari. Biochim Biophys Acta Gene Regul Mech 2017
3
100

Novel mutations of the HOXD13 gene in hand and foot malformations.
Kayoko Nakano, Naohiko Sakai, Yasuharu Yamazaki, Hiroi Watanabe, Naoto Yamada, Koichiro Sezaki, Takafumi Susami, Katsushi Tokunaga, Tsuyoshi Takato, Eiju Uchinuma. Int Surg 2007
10
100

An interspecies analysis reveals a key role for unmethylated CpG dinucleotides in vertebrate Polycomb complex recruitment.
Magnus D Lynch, Andrew J H Smith, Marco De Gobbi, Maria Flenley, Jim R Hughes, Douglas Vernimmen, Helena Ayyub, Jacqueline A Sharpe, Jacqueline A Sloane-Stanley, Linda Sutherland,[...]. EMBO J 2012
145
100

From trans to cis: transcriptional regulatory networks in neocortical development.
Mikihito Shibata, Forrest O Gulden, Nenad Sestan. Trends Genet 2015
35
100

A long ncRNA links copy number variation to a polycomb/trithorax epigenetic switch in FSHD muscular dystrophy.
Daphne S Cabianca, Valentina Casa, Beatrice Bodega, Alexandros Xynos, Enrico Ginelli, Yujiro Tanaka, Davide Gabellini. Cell 2012
266
100

Abnormal Elongations of HOX Gene Clusters May Cause Cancer.
Spyros Papageorgiou. Front Cell Dev Biol 2018
3
100


Human HOX gene disorders.
Shane C Quinonez, Jeffrey W Innis. Mol Genet Metab 2014
92
100

Identification and validation of candidate epigenetic biomarkers in lung adenocarcinoma.
Iben Daugaard, Diana Dominguez, Tina E Kjeldsen, Lasse S Kristensen, Henrik Hager, Tomasz K Wojdacz, Lise Lotte Hansen. Sci Rep 2016
43
100

Organizational principles of 3D genome architecture.
M Jordan Rowley, Victor G Corces. Nat Rev Genet 2018
445
100


Interaction of the Chromatin Remodeling Protein hINO80 with DNA.
Shweta Mendiratta, Shipra Bhatia, Shruti Jain, Taniya Kaur, Vani Brahmachari. PLoS One 2016
8
100

The HOX Code as a "biological fingerprint" to distinguish functionally distinct stem cell populations derived from cord blood.
Stefanie Liedtke, Anja Buchheiser, Julia Bosch, Frank Bosse, Fabian Kruse, Xiaoyi Zhao, Simeon Santourlidis, Gesine Kögler. Stem Cell Res 2010
51
100

A functionally conserved Polycomb response element from mouse HoxD complex responds to heterochromatin factors.
Dasari Vasanthi, A Nagabhushan, Navneet Kaur Matharu, Rakesh K Mishra. Sci Rep 2013
17
100

HOX expression patterns identify a common signature for favorable AML.
M Andreeff, V Ruvolo, S Gadgil, C Zeng, K Coombes, W Chen, S Kornblau, A E Barón, H A Drabkin. Leukemia 2008
91
100

Disease-associated variants in different categories of disease located in distinct regulatory elements.
Meng Ma, Ying Ru, Ling-Shiang Chuang, Nai-Yun Hsu, Li-Song Shi, Jörg Hakenberg, Wei-Yi Cheng, Andrew Uzilov, Wei Ding, Benjamin S Glicksberg,[...]. BMC Genomics 2015
35
100


Remodeling of the chromatin structure of the facioscapulohumeral muscular dystrophy (FSHD) locus and upregulation of FSHD-related gene 1 (FRG1) expression during human myogenic differentiation.
Beatrice Bodega, Gabriella Di Capua Ramirez, Florian Grasser, Stefania Cheli, Silvia Brunelli, Marina Mora, Raffaella Meneveri, Anna Marozzi, Stefan Mueller, Elena Battaglioli,[...]. BMC Biol 2009
69
100

A double take on bivalent promoters.
Philipp Voigt, Wee-Wei Tee, Danny Reinberg. Genes Dev 2013
519
100

Structural insights into the interactions of Polycomb Repressive Complex 2 with chromatin.
Akhil Gargey Iragavarapu, Liqi Yao, Vignesh Kasinath. Biochem Soc Trans 2021
1
100

The quest for mammalian Polycomb response elements: are we there yet?
Moritz Bauer, Johanna Trupke, Leonie Ringrose. Chromosoma 2016
63
100

Reorganization of inter-chromosomal interactions in the 2q37-deletion syndrome.
Philipp G Maass, Anja Weise, Katharina Rittscher, Julia Lichtenwald, A Rasim Barutcu, Thomas Liehr, Atakan Aydin, Yvette Wefeld-Neuenfeld, Laura Pölsler, Sigrid Tinschert,[...]. EMBO J 2018
8
100

Dynamic Competition of Polycomb and Trithorax in Transcriptional Programming.
Mitzi I Kuroda, Hyuckjoon Kang, Sandip De, Judith A Kassis. Annu Rev Biochem 2020
41
100

From genetics to epigenetics: the tale of Polycomb group and trithorax group genes.
Charlotte Grimaud, Nicolas Nègre, Giacomo Cavalli. Chromosome Res 2006
130
100

Clustering of mammalian Hox genes with other H3K27me3 targets within an active nuclear domain.
Maxence Vieux-Rochas, Pierre J Fabre, Marion Leleu, Denis Duboule, Daan Noordermeer. Proc Natl Acad Sci U S A 2015
99
100

Gene silencing and Polycomb group proteins: an overview of their structure, mechanisms and phylogenetics.
Shahram Golbabapour, Nazia Abdul Majid, Pouya Hassandarvish, Maryam Hajrezaie, Mahmood Ameen Abdulla, A Hamid A Hadi. OMICS 2013
30
100

Genome-wide prediction of Polycomb/Trithorax response elements in Drosophila melanogaster.
Leonie Ringrose, Marc Rehmsmeier, Jean-Maurice Dura, Renato Paro. Dev Cell 2003
204
100

Downregulation of HOXA3 in lung adenocarcinoma and its relevant molecular mechanism analysed by RT-qPCR, TCGA and in silico analysis.
Bin-Liang Gan, Rong-Quan He, Yu Zhang, Dan-Ming Wei, Xiao-Hua Hu, Gang Chen. Int J Oncol 2018
20
100


Genome Regulation by Polycomb and Trithorax: 70 Years and Counting.
Bernd Schuettengruber, Henri-Marc Bourbon, Luciano Di Croce, Giacomo Cavalli. Cell 2017
492
100

Polycomb-dependent regulatory contacts between distant Hox loci in Drosophila.
Frédéric Bantignies, Virginie Roure, Itys Comet, Benjamin Leblanc, Bernd Schuettengruber, Jérôme Bonnet, Vanessa Tixier, André Mas, Giacomo Cavalli. Cell 2011
291
100

GEPIA: a web server for cancer and normal gene expression profiling and interactive analyses.
Zefang Tang, Chenwei Li, Boxi Kang, Ge Gao, Cheng Li, Zemin Zhang. Nucleic Acids Res 2017
100


Suz12 is essential for mouse development and for EZH2 histone methyltransferase activity.
Diego Pasini, Adrian P Bracken, Michael R Jensen, Eros Lazzerini Denchi, Kristian Helin. EMBO J 2004
640
100

Short sequences can efficiently recruit histone H3 lysine 27 trimethylation in the absence of enhancer activity and DNA methylation.
Philip Jermann, Leslie Hoerner, Lukas Burger, Dirk Schübeler. Proc Natl Acad Sci U S A 2014
98
100

Identification and Validation of a Putative Polycomb Responsive Element in the Human Genome.
Hemant Bengani, Shweta Mendiratta, Jayant Maini, Dasari Vasanthi, Hina Sultana, Mohsen Ghasemi, Jasmine Ahluwalia, Sowmya Ramachandran, Rakesh K Mishra, Vani Brahmachari. PLoS One 2013
10
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.